; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy05g003330 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g003330
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionABC transporter C family member 12-like
Genome locationChr05:2979127..2985003
RNA-Seq ExpressionLcy05g003330
SyntenyLcy05g003330
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011527 - ABC transporter type 1, transmembrane domain
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR036640 - ABC transporter type 1, transmembrane domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146637.1 LOW QUALITY PROTEIN: ABC transporter C family member 12-like [Momordica charantia]6.6e-4795.19Show/hide
Query:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW
        LN FILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPN LSQVVNAHVSLQR+EELFLIEER+LAPNPPLEPGLPAISI+NGCFSW
Subjt:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW

Query:  DSKV
        DSKV
Subjt:  DSKV

XP_022977522.1 ABC transporter C family member 12-like [Cucurbita maxima]7.3e-4694.23Show/hide
Query:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW
        LN FI+NS+PVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLR PLNMLPN LSQVVNAHVSLQRMEELFL EERILAPNPPLEPGLPAISIKNGCFSW
Subjt:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW

Query:  DSKV
        DSKV
Subjt:  DSKV

XP_038882169.1 ABC transporter C family member 12-like isoform X2 [Benincasa hispida]1.6e-4593.27Show/hide
Query:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW
        LN FILNS+PVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLR P+ MLPN LSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISI+NGCFSW
Subjt:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW

Query:  DSKV
        DSKV
Subjt:  DSKV

XP_038882170.1 ABC transporter C family member 12-like isoform X3 [Benincasa hispida]1.6e-4593.27Show/hide
Query:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW
        LN FILNS+PVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLR P+ MLPN LSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISI+NGCFSW
Subjt:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW

Query:  DSKV
        DSKV
Subjt:  DSKV

XP_038882172.1 ABC transporter C family member 2-like isoform X4 [Benincasa hispida]1.6e-4593.27Show/hide
Query:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW
        LN FILNS+PVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLR P+ MLPN LSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISI+NGCFSW
Subjt:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW

Query:  DSKV
        DSKV
Subjt:  DSKV

TrEMBL top hitse value%identityAlignment
A0A1S3AYM9 ABC transporter C family member 12-like1.6e-4389.32Show/hide
Query:  NSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSWD
        N FI+N IP+FVTV+SFGVFTL GGDLTPARAFTSLSLFAVLR PLNMLPN LSQVVNAHVSLQRMEELFLI+ER LAPNPPLE GLPAISIKNGCFSWD
Subjt:  NSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSWD

Query:  SKV
        SKV
Subjt:  SKV

A0A6J1D047 LOW QUALITY PROTEIN: ABC transporter C family member 12-like3.2e-4795.19Show/hide
Query:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW
        LN FILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPN LSQVVNAHVSLQR+EELFLIEER+LAPNPPLEPGLPAISI+NGCFSW
Subjt:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW

Query:  DSKV
        DSKV
Subjt:  DSKV

A0A6J1ED72 ABC transporter C family member 12-like1.0e-4593.27Show/hide
Query:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW
        LN FI+NS+PVFVTVISFGVFT LGGDLTPARAFTSLSLFAVLR PLNMLPN LSQVVNAHVSLQRMEELFL EERILAPNPPLEPGLPAISIKNGCFSW
Subjt:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW

Query:  DSKV
        DSKV
Subjt:  DSKV

A0A6J1EDU0 ABC transporter C family member 12-like isoform X11.9e-4490.48Show/hide
Query:  NLNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFS
        +LN FI+NS+PVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLR PLNMLPN LSQVVNAHVSLQR+E L L EERILAPNPPLEPGLPAISIKNGCFS
Subjt:  NLNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFS

Query:  WDSKV
        WDSKV
Subjt:  WDSKV

A0A6J1IIR6 ABC transporter C family member 12-like3.5e-4694.23Show/hide
Query:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW
        LN FI+NS+PVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLR PLNMLPN LSQVVNAHVSLQRMEELFL EERILAPNPPLEPGLPAISIKNGCFSW
Subjt:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW

Query:  DSKV
        DSKV
Subjt:  DSKV

SwissProt top hitse value%identityAlignment
Q42093 ABC transporter C family member 21.6e-4080.58Show/hide
Query:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW
        LN FILNSIPV VT++SFGVFTLLGGDLTPARAFTSLSLFAVLRFPL MLPN ++QVVNA+VSL+R+EE+   EERIL PNPP+EPG PAISI+NG FSW
Subjt:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW

Query:  DSK
        DSK
Subjt:  DSK

Q9C8G9 ABC transporter C family member 15.3e-3976.19Show/hide
Query:  SNLNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCF
        S  N FILNSIPV VTV+SFGVF+LLGGDLTPARAFTSLSLF+VLRFPL MLPN ++Q+VNA+VSL R+EE+   EER+L PNPP+EPG PAISI+NG F
Subjt:  SNLNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCF

Query:  SWDSK
        SWDSK
Subjt:  SWDSK

Q9C8H0 ABC transporter C family member 123.5e-4386.67Show/hide
Query:  SNLNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCF
        S  NSFILNSIPV VTV+SFGVF LLGGDLTPARAFTSLSLFAVLRFPLNMLPN LSQVVNA+VSLQR+EEL L EERILA NPPL+PG PAISIKNG F
Subjt:  SNLNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCF

Query:  SWDSK
        SWDSK
Subjt:  SWDSK

Q9C8H1 ABC transporter C family member 115.3e-3979.05Show/hide
Query:  SNLNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCF
        S  NSFILNS PV VT++SFGV+ LLGGDLTPARAFTSLSLFAVLR PL+ LPN +SQ VNA+VSLQR+EEL L EERILA NPPL+PG PAISIKNG F
Subjt:  SNLNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCF

Query:  SWDSK
        SWDSK
Subjt:  SWDSK

Q9M8M3 Pentatricopeptide repeat-containing protein At1g80550, mitochondrial5.6e-2564.2Show/hide
Query:  MDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVQKGMIDMARKYDEEMVAKGLSPKLREELGKKMVN
        MDTYVMLMRKF RWGFL+PV  VW  M+E G +P+ +AYNA+IDAL+QKGM+DMAR+Y+EEM+ +GLSP+ R EL +K ++
Subjt:  MDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVQKGMIDMARKYDEEMVAKGLSPKLREELGKKMVN

Arabidopsis top hitse value%identityAlignment
AT1G30400.1 multidrug resistance-associated protein 13.7e-4076.19Show/hide
Query:  SNLNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCF
        S  N FILNSIPV VTV+SFGVF+LLGGDLTPARAFTSLSLF+VLRFPL MLPN ++Q+VNA+VSL R+EE+   EER+L PNPP+EPG PAISI+NG F
Subjt:  SNLNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCF

Query:  SWDSK
        SWDSK
Subjt:  SWDSK

AT1G30410.1 multidrug resistance-associated protein 132.5e-4486.67Show/hide
Query:  SNLNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCF
        S  NSFILNSIPV VTV+SFGVF LLGGDLTPARAFTSLSLFAVLRFPLNMLPN LSQVVNA+VSLQR+EEL L EERILA NPPL+PG PAISIKNG F
Subjt:  SNLNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCF

Query:  SWDSK
        SWDSK
Subjt:  SWDSK

AT1G30420.1 multidrug resistance-associated protein 123.7e-4079.05Show/hide
Query:  SNLNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCF
        S  NSFILNS PV VT++SFGV+ LLGGDLTPARAFTSLSLFAVLR PL+ LPN +SQ VNA+VSLQR+EEL L EERILA NPPL+PG PAISIKNG F
Subjt:  SNLNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCF

Query:  SWDSK
        SWDSK
Subjt:  SWDSK

AT2G34660.1 multidrug resistance-associated protein 21.2e-4180.58Show/hide
Query:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW
        LN FILNSIPV VT++SFGVFTLLGGDLTPARAFTSLSLFAVLRFPL MLPN ++QVVNA+VSL+R+EE+   EERIL PNPP+EPG PAISI+NG FSW
Subjt:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW

Query:  DSK
        DSK
Subjt:  DSK

AT2G34660.2 multidrug resistance-associated protein 21.2e-4180.58Show/hide
Query:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW
        LN FILNSIPV VT++SFGVFTLLGGDLTPARAFTSLSLFAVLRFPL MLPN ++QVVNA+VSL+R+EE+   EERIL PNPP+EPG PAISI+NG FSW
Subjt:  LNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSW

Query:  DSK
        DSK
Subjt:  DSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACTTACGTGATGCTCATGAGGAAGTTTGGAAGATGGGGGTTTCTAAGACCAGTGTTTTTGGTGTGGAATAAGATGGAGGAACTTGGGTGTAGTCCAAACGAGTC
TGCTTACAATGCTTTGATTGATGCTCTTGTGCAGAAGGGCATGATAGATATGGCTAGGAAGTACGATGAAGAAATGGTAGCGAAGGGTCTTTCGCCTAAGCTAAGAGAGG
AATTGGGGAAAAAGATGGTGAATGGTGGCTCCAATTTAAACAGTTTTATTCTGAATAGCATCCCAGTGTTTGTAACTGTAATTTCCTTTGGGGTATTCACATTGCTTGGT
GGAGATTTGACACCTGCAAGGGCCTTTACATCACTTTCCCTGTTTGCGGTGCTTCGATTTCCTCTAAACATGCTTCCTAATTTTTTAAGTCAGGTTGTAAATGCACATGT
ATCATTACAGCGTATGGAGGAGCTTTTCTTGATTGAAGAGAGAATTCTTGCTCCAAATCCACCATTGGAACCTGGCCTTCCAGCAATTTCCATAAAAAATGGATGTTTTT
CATGGGATTCCAAGGTTTTTTATTGGTACACTTTATATCTTCATATACATGATTTTCCATCATCTCGACACAGCCGAGACTTAGCTTGCTTATTATTTTCAGAGACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATACTTACGTGATGCTCATGAGGAAGTTTGGAAGATGGGGGTTTCTAAGACCAGTGTTTTTGGTGTGGAATAAGATGGAGGAACTTGGGTGTAGTCCAAACGAGTC
TGCTTACAATGCTTTGATTGATGCTCTTGTGCAGAAGGGCATGATAGATATGGCTAGGAAGTACGATGAAGAAATGGTAGCGAAGGGTCTTTCGCCTAAGCTAAGAGAGG
AATTGGGGAAAAAGATGGTGAATGGTGGCTCCAATTTAAACAGTTTTATTCTGAATAGCATCCCAGTGTTTGTAACTGTAATTTCCTTTGGGGTATTCACATTGCTTGGT
GGAGATTTGACACCTGCAAGGGCCTTTACATCACTTTCCCTGTTTGCGGTGCTTCGATTTCCTCTAAACATGCTTCCTAATTTTTTAAGTCAGGTTGTAAATGCACATGT
ATCATTACAGCGTATGGAGGAGCTTTTCTTGATTGAAGAGAGAATTCTTGCTCCAAATCCACCATTGGAACCTGGCCTTCCAGCAATTTCCATAAAAAATGGATGTTTTT
CATGGGATTCCAAGGTTTTTTATTGGTACACTTTATATCTTCATATACATGATTTTCCATCATCTCGACACAGCCGAGACTTAGCTTGCTTATTATTTTCAGAGACTTAG
Protein sequenceShow/hide protein sequence
MDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVQKGMIDMARKYDEEMVAKGLSPKLREELGKKMVNGGSNLNSFILNSIPVFVTVISFGVFTLLG
GDLTPARAFTSLSLFAVLRFPLNMLPNFLSQVVNAHVSLQRMEELFLIEERILAPNPPLEPGLPAISIKNGCFSWDSKVFYWYTLYLHIHDFPSSRHSRDLACLLFSET