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Lcy05g005010 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g005010
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNase H domain-containing protein
Genome locationChr05:4595589..4596369
RNA-Seq ExpressionLcy05g005010
SyntenyLcy05g005010
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021753633.1 uncharacterized protein LOC110719026 [Chenopodium quinoa]7.4e-1032.12Show/hide
Query:  WQTWILRNKMADHNQTRAAKILFQSIGSSINEREDSYLKTQPSKRPGSFASQVPGEVPNPIDW--------KLKSDAAWIEKLGRGGLGWVVLDLEGFVV
        W  W  RN      + R+A  + +    +I E  D+    +  K  G   +   GE+  P+ W        K+  D  ++ +L   GLG VV D  G VV
Subjt:  WQTWILRNKMADHNQTRAAKILFQSIGSSINEREDSYLKTQPSKRPGSFASQVPGEVPNPIDW--------KLKSDAAWIEKLGRGGLGWVVLDLEGFVV

Query:  YFGMQQITRKWATKTLEAKAMLMGLKQISGTCRRRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHCSRVLNIVSH
          G+QQI   W  +  EAKA+  GL+  +G   R    LV ESD ++V+  L N + DLS+L  I D I+ + SS   V   +  R  N V+H
Subjt:  YFGMQQITRKWATKTLEAKAMLMGLKQISGTCRRRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHCSRVLNIVSH
XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]1.3e-0930Show/hide
Query:  LSKEKIAKGAIIMWQTWILRNKMADHNQTRAAKILFQSIGSSIN---------------EREDSYLKTQPSKRPGSFASQVPGEVPNPIDWKLKSDAAWI
        LS E++A   +I WQ W  RN+     +T   + L +SI   IN               ++ D YL   P  R       V    P    WKL +DA+W 
Subjt:  LSKEKIAKGAIIMWQTWILRNKMADHNQTRAAKILFQSIGSSIN---------------EREDSYLKTQPSKRPGSFASQVPGEVPNPIDWKLKSDAAWI

Query:  EKLGRGGLGWVVLDLEGFVVYFGMQQITRKWATKTLEAKAMLMGLKQISGTCRRRSIPLVAESDVMEVVNVLTNASEDLS
        E+   GG+GW++ D  G +V  G  +I  K     LE   ++ GL+ I+   R    P+  ESD +EV+ ++     DL+
Subjt:  EKLGRGGLGWVVLDLEGFVVYFGMQQITRKWATKTLEAKAMLMGLKQISGTCRRRSIPLVAESDVMEVVNVLTNASEDLS
XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]7.9e-1227.4Show/hide
Query:  KEKIAKGAIIMWQTWILRNK---MADHNQTRAAKI-----LFQSIGSSINEREDSYLKTQPSKRPGSFASQVPGEVPNPIDWKLKSDAAWIEKLGRGGLG
        +E+  +  II WQ W +RNK      H +TR  ++     +  S G + N +  S  K     R     +    + P    WKL ++AAW      GG+G
Subjt:  KEKIAKGAIIMWQTWILRNK---MADHNQTRAAKI-----LFQSIGSSINEREDSYLKTQPSKRPGSFASQVPGEVPNPIDWKLKSDAAWIEKLGRGGLG

Query:  WVVLDLEGFVVYFGMQQITRKWATKTLEAKAMLMGLKQI-SGTCRRRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHCSRVL
        W++ D +G V+    + I  +     LE  A+  GL+ I    CR    P+  ESD +E +++L    +D +++  + ++I  +   +  V +RH SR  
Subjt:  WVVLDLEGFVVYFGMQQITRKWATKTLEAKAMLMGLKQI-SGTCRRRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHCSRVL

Query:  NIVSHCVAKKAADFSVDHE
        N V+H +A++A +  +  E
Subjt:  NIVSHCVAKKAADFSVDHE
XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]2.8e-0926.42Show/hide
Query:  WQTWILRNKMADHNQTRAAKILFQSIGSSINEREDSY-LKTQPSKRPGSFASQVPGEVPNPIDWKLKSDAAWIEKLGRGGLGWVVLDLEGFVVYFGMQQI
        W  W  RN +    +  +   + Q +   +   E SY  +T  S    +  +++  E P    W L +DA+W +   RGG+GW++   +G +V  G + +
Subjt:  WQTWILRNKMADHNQTRAAKILFQSIGSSINEREDSY-LKTQPSKRPGSFASQVPGEVPNPIDWKLKSDAAWIEKLGRGGLGWVVLDLEGFVVYFGMQQI

Query:  TRKWATKTLEAKAMLMGLKQISGTCRRRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHCSRVLNIVSHCVAKKAA
              K LEA A+L GL+ ++     R  PL  E+D  EV ++L    EDL+    + ++I+++  S   +      R  N  +H +A++A+
Subjt:  TRKWATKTLEAKAMLMGLKQISGTCRRRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHCSRVLNIVSHCVAKKAA
XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]1.0e-1127.35Show/hide
Query:  KEKIAKGAIIMWQTWILRNK---MADHNQTRAAKI-----LFQSIGSSINEREDSYLKTQPSKRPGSFASQVPGEVPNPIDWKLKSDAAWIEKLGRGGLG
        +E+  +  II WQ W +RNK      H++TR  ++     +  S G   N +  S  K     R     +    + P    WKL +DAAW      GG+G
Subjt:  KEKIAKGAIIMWQTWILRNK---MADHNQTRAAKI-----LFQSIGSSINEREDSYLKTQPSKRPGSFASQVPGEVPNPIDWKLKSDAAWIEKLGRGGLG

Query:  WVVLDLEGFVVYFGMQQITRKWATKTLEAKAMLMGLKQI-SGTCR----RRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHC
        W++ D +G V+    + I  +     LE  A+  GL+ I    CR        P+  ESD +E +++L    +D +++  + ++I  +   +  V +RH 
Subjt:  WVVLDLEGFVVYFGMQQITRKWATKTLEAKAMLMGLKQI-SGTCR----RRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHC

Query:  SRVLNIVSHCVAKKAADFSVDHE
        SR  N V+H +A++A +  +  E
Subjt:  SRVLNIVSHCVAKKAADFSVDHE
TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134123.8e-1227.4Show/hide
Query:  KEKIAKGAIIMWQTWILRNK---MADHNQTRAAKI-----LFQSIGSSINEREDSYLKTQPSKRPGSFASQVPGEVPNPIDWKLKSDAAWIEKLGRGGLG
        +E+  +  II WQ W +RNK      H +TR  ++     +  S G + N +  S  K     R     +    + P    WKL ++AAW      GG+G
Subjt:  KEKIAKGAIIMWQTWILRNK---MADHNQTRAAKI-----LFQSIGSSINEREDSYLKTQPSKRPGSFASQVPGEVPNPIDWKLKSDAAWIEKLGRGGLG

Query:  WVVLDLEGFVVYFGMQQITRKWATKTLEAKAMLMGLKQI-SGTCRRRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHCSRVL
        W++ D +G V+    + I  +     LE  A+  GL+ I    CR    P+  ESD +E +++L    +D +++  + ++I  +   +  V +RH SR  
Subjt:  WVVLDLEGFVVYFGMQQITRKWATKTLEAKAMLMGLKQI-SGTCRRRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHCSRVL

Query:  NIVSHCVAKKAADFSVDHE
        N V+H +A++A +  +  E
Subjt:  NIVSHCVAKKAADFSVDHE
A0A6J1CQG0 uncharacterized protein LOC1110132166.1e-1030Show/hide
Query:  LSKEKIAKGAIIMWQTWILRNKMADHNQTRAAKILFQSIGSSIN---------------EREDSYLKTQPSKRPGSFASQVPGEVPNPIDWKLKSDAAWI
        LS E++A   +I WQ W  RN+     +T   + L +SI   IN               ++ D YL   P  R       V    P    WKL +DA+W 
Subjt:  LSKEKIAKGAIIMWQTWILRNKMADHNQTRAAKILFQSIGSSIN---------------EREDSYLKTQPSKRPGSFASQVPGEVPNPIDWKLKSDAAWI

Query:  EKLGRGGLGWVVLDLEGFVVYFGMQQITRKWATKTLEAKAMLMGLKQISGTCRRRSIPLVAESDVMEVVNVLTNASEDLS
        E+   GG+GW++ D  G +V  G  +I  K     LE   ++ GL+ I+   R    P+  ESD +EV+ ++     DL+
Subjt:  EKLGRGGLGWVVLDLEGFVVYFGMQQITRKWATKTLEAKAMLMGLKQISGTCRRRSIPLVAESDVMEVVNVLTNASEDLS
A0A6J1D4B6 uncharacterized protein LOC1110171811.3e-0725.96Show/hide
Query:  KIAKGAIIMWQTWILRNKMADHNQTRAAKILFQSIGSSINEREDSYLKTQPSKRPGSFASQVPGEVPNPIDWKLKSDAAWIEKLGRGGLGWVVLDLEG-F
        K   G +++W  W  RN++      +      ++   S      + L    +    +    V    P    WKL  DA W++ L  GGLGW+V D EG F
Subjt:  KIAKGAIIMWQTWILRNKMADHNQTRAAKILFQSIGSSINEREDSYLKTQPSKRPGSFASQVPGEVPNPIDWKLKSDAAWIEKLGRGGLGWVVLDLEG-F

Query:  VVYFGMQQITRKWATKTLEAKAMLMGLKQISGTCRRRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHCSRVLNIVSHCVAKK
        ++   ++ +++   + TLEA                  I +  ESD +EVVN++  +S  L+++  I + I     SL     +H     N V+H +A++
Subjt:  VVYFGMQQITRKWATKTLEAKAMLMGLKQISGTCRRRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHCSRVLNIVSHCVAKK

Query:  AADFSVDH
        A  F V+H
Subjt:  AADFSVDH
A0A6J1DNV9 uncharacterized protein LOC1110224031.4e-0926.42Show/hide
Query:  WQTWILRNKMADHNQTRAAKILFQSIGSSINEREDSY-LKTQPSKRPGSFASQVPGEVPNPIDWKLKSDAAWIEKLGRGGLGWVVLDLEGFVVYFGMQQI
        W  W  RN +    +  +   + Q +   +   E SY  +T  S    +  +++  E P    W L +DA+W +   RGG+GW++   +G +V  G + +
Subjt:  WQTWILRNKMADHNQTRAAKILFQSIGSSINEREDSY-LKTQPSKRPGSFASQVPGEVPNPIDWKLKSDAAWIEKLGRGGLGWVVLDLEGFVVYFGMQQI

Query:  TRKWATKTLEAKAMLMGLKQISGTCRRRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHCSRVLNIVSHCVAKKAA
              K LEA A+L GL+ ++     R  PL  E+D  EV ++L    EDL+    + ++I+++  S   +      R  N  +H +A++A+
Subjt:  TRKWATKTLEAKAMLMGLKQISGTCRRRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHCSRVLNIVSHCVAKKAA
A0A6J1DSV1 uncharacterized protein LOC1110236085.0e-1227.35Show/hide
Query:  KEKIAKGAIIMWQTWILRNK---MADHNQTRAAKI-----LFQSIGSSINEREDSYLKTQPSKRPGSFASQVPGEVPNPIDWKLKSDAAWIEKLGRGGLG
        +E+  +  II WQ W +RNK      H++TR  ++     +  S G   N +  S  K     R     +    + P    WKL +DAAW      GG+G
Subjt:  KEKIAKGAIIMWQTWILRNK---MADHNQTRAAKI-----LFQSIGSSINEREDSYLKTQPSKRPGSFASQVPGEVPNPIDWKLKSDAAWIEKLGRGGLG

Query:  WVVLDLEGFVVYFGMQQITRKWATKTLEAKAMLMGLKQI-SGTCR----RRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHC
        W++ D +G V+    + I  +     LE  A+  GL+ I    CR        P+  ESD +E +++L    +D +++  + ++I  +   +  V +RH 
Subjt:  WVVLDLEGFVVYFGMQQITRKWATKTLEAKAMLMGLKQI-SGTCR----RRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHC

Query:  SRVLNIVSHCVAKKAADFSVDHE
        SR  N V+H +A++A +  +  E
Subjt:  SRVLNIVSHCVAKKAADFSVDHE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.2e-0422.61Show/hide
Query:  IMWQTWILRNK-MADHNQTRAAKILFQSIGSSINEREDSYLKTQPSKRPGSFASQVPGEVPNPIDW-KLKSDAAWIEKLGRGGLGWVVLDLEGFVVYFGM
        ++W+ W  RN+ M    +  A ++L +++           L+ + S         V  + P P  W K  +DA W  +  R G+GW++ +  G V++ G 
Subjt:  IMWQTWILRNK-MADHNQTRAAKILFQSIGSSINEREDSYLKTQPSKRPGSFASQVPGEVPNPIDW-KLKSDAAWIEKLGRGGLGWVVLDLEGFVVYFGM

Query:  QQITRKWATKTLEAKAMLMGLKQISGTCRRRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHCSRVLNIVSHCVAKKAADFS
        + + R       E +A+   +  +S    +R   ++ ESD   +VN+L N+ +    L+   + I  +      V+     R  N V+  +A+++  FS
Subjt:  QQITRKWATKTLEAKAMLMGLKQISGTCRRRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHCSRVLNIVSHCVAKKAADFS
AT4G29090.1 Ribonuclease H-like superfamily protein1.0e-0421.83Show/hide
Query:  IMWQTWILRNKMADHNQTRAAKILFQSIGSSINEREDSYLKTQPSKRPGSFASQVPGEVPNPIDW-KLKSDAAWIEKLGRGGLGWVVLDLEGFVVYFGMQ
        ++W+ W  RN++    +   A+ + +     + E            +P    S      P P  W K  +DA W     R G+GWV+ + +G V + G +
Subjt:  IMWQTWILRNKMADHNQTRAAKILFQSIGSSINEREDSYLKTQPSKRPGSFASQVPGEVPNPIDW-KLKSDAAWIEKLGRGGLGWVVLDLEGFVVYFGMQ

Query:  QITRKWATKTLEAKAMLMGLKQISGTCRRRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHCSRVLNIVSHCVAKKAADF
         + +  +    E +AM   +  +S   R +   ++ ESD   ++ +L N  E    LK     +  + S    V+     R  N ++  VA+++  F
Subjt:  QITRKWATKTLEAKAMLMGLKQISGTCRRRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHCSRVLNIVSHCVAKKAADF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCGAATTTAAGCAAGGAAAAAATTGCAAAAGGAGCTATAATTATGTGGCAGACATGGATTCTTCGCAACAAAATGGCGGATCACAACCAAACGAGAGCAGCAAA
GATCCTATTCCAAAGCATTGGCTCAAGTATAAATGAACGGGAAGACTCTTACCTCAAGACCCAACCATCAAAGAGACCAGGGAGCTTTGCGAGTCAGGTTCCGGGAGAAG
TTCCCAATCCGATCGACTGGAAATTAAAGTCTGATGCCGCCTGGATCGAGAAATTGGGACGGGGAGGGCTAGGTTGGGTGGTGCTTGACTTGGAAGGATTTGTGGTCTAC
TTCGGAATGCAGCAAATTACAAGAAAATGGGCCACCAAAACATTAGAGGCAAAAGCTATGCTAATGGGGCTAAAGCAAATCTCGGGTACCTGTAGAAGACGATCAATCCC
CTTGGTAGCTGAATCAGACGTGATGGAGGTTGTTAATGTCCTCACCAATGCCTCAGAAGATCTCTCTGACTTGAAGACCATCACCGATCAAATTATTTCCATAACTTCAA
GCTTGCACGGGGTGGAACTTCGACACTGCAGTAGAGTTTTGAACATAGTATCTCACTGTGTTGCGAAGAAGGCAGCGGATTTTTCGGTTGATCATGAGAACTCTCAAGGT
TGTTGGTATTCGCGGGATTTGGGGCATGTTTTTTGGGCTCCCAATTTACCTTATTGGTTTTTCCCTCCCTTTAATGAGAGTAGGTGTAAAAACAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCGAATTTAAGCAAGGAAAAAATTGCAAAAGGAGCTATAATTATGTGGCAGACATGGATTCTTCGCAACAAAATGGCGGATCACAACCAAACGAGAGCAGCAAA
GATCCTATTCCAAAGCATTGGCTCAAGTATAAATGAACGGGAAGACTCTTACCTCAAGACCCAACCATCAAAGAGACCAGGGAGCTTTGCGAGTCAGGTTCCGGGAGAAG
TTCCCAATCCGATCGACTGGAAATTAAAGTCTGATGCCGCCTGGATCGAGAAATTGGGACGGGGAGGGCTAGGTTGGGTGGTGCTTGACTTGGAAGGATTTGTGGTCTAC
TTCGGAATGCAGCAAATTACAAGAAAATGGGCCACCAAAACATTAGAGGCAAAAGCTATGCTAATGGGGCTAAAGCAAATCTCGGGTACCTGTAGAAGACGATCAATCCC
CTTGGTAGCTGAATCAGACGTGATGGAGGTTGTTAATGTCCTCACCAATGCCTCAGAAGATCTCTCTGACTTGAAGACCATCACCGATCAAATTATTTCCATAACTTCAA
GCTTGCACGGGGTGGAACTTCGACACTGCAGTAGAGTTTTGAACATAGTATCTCACTGTGTTGCGAAGAAGGCAGCGGATTTTTCGGTTGATCATGAGAACTCTCAAGGT
TGTTGGTATTCGCGGGATTTGGGGCATGTTTTTTGGGCTCCCAATTTACCTTATTGGTTTTTCCCTCCCTTTAATGAGAGTAGGTGTAAAAACAGTTGAGCTTTAATTTC
ATGTTTATTTC
Protein sequenceShow/hide protein sequence
MEANLSKEKIAKGAIIMWQTWILRNKMADHNQTRAAKILFQSIGSSINEREDSYLKTQPSKRPGSFASQVPGEVPNPIDWKLKSDAAWIEKLGRGGLGWVVLDLEGFVVY
FGMQQITRKWATKTLEAKAMLMGLKQISGTCRRRSIPLVAESDVMEVVNVLTNASEDLSDLKTITDQIISITSSLHGVELRHCSRVLNIVSHCVAKKAADFSVDHENSQG
CWYSRDLGHVFWAPNLPYWFFPPFNESRCKNS