; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy05g005560 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g005560
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationChr05:5085354..5086694
RNA-Seq ExpressionLcy05g005560
SyntenyLcy05g005560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046672.1 extensin-2 [Cucumis melo var. makuwa]3.1e-5478.12Show/hide
Query:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQ---PVPTSECPPPPAPPSCDSCVYPSPPP
        MAN + IFLT FLFSL KFS  SSA+ VA DQ  CSMCS CDNPCQL PPPPPPPPVV+CPPPPSPPPPP    P+PTS+CPPPP+PPSCD+CVYPSPPP
Subjt:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQ---PVPTSECPPPPAPPSCDSCVYPSPPP

Query:  PSSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIIL
        PSSV PYPP+DGGQFPG+APPPPNPILPY+PYYYYSPPSAS KSV FSW++ PL F II+
Subjt:  PSSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIIL

XP_022953998.1 leucine-rich repeat extensin-like protein 3 [Cucurbita moschata]4.8e-4772.22Show/hide
Query:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQPVP-----TSECPPPPAPPSCDSCVYPSP
        MA+L SIFLTLFL SLSKFS  SS T  A DQ  CSMC+ CDNPCQL   PPPPP +VDCPPPPSPPPPP P P     T ECPPPP+PPSCD+CVYPSP
Subjt:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQPVP-----TSECPPPPAPPSCDSCVYPSP

Query:  PPPSSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIIL
        PPPSS+ PY P DGGQ+PG+APPPPNPILPY+PYYYY+PPS SGKSV FSW+  PL F + L
Subjt:  PPPSSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIIL

XP_022991777.1 leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]1.2e-5077.99Show/hide
Query:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPP--VVDCPPPPSPPPPPQPVPTSECPPPPAPPSCDSCVYPSPPPP
        MA+L SIFLTLFLFSLSKFS  S AT  A DQ  CSMCS CDNPCQLPPPPPPPPP  VVDCPPPPSPPPPP P P  ECPPPP+PPSCD+CVYPSPPPP
Subjt:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPP--VVDCPPPPSPPPPPQPVPTSECPPPPAPPSCDSCVYPSPPPP

Query:  SSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIIL
        SS+ PY P DGGQ+PGVAPPPPNPILPY+PYYYY+PPS SGKSV FSW+  PL F + L
Subjt:  SSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIIL

XP_023514546.1 leucine-rich repeat extensin-like protein 6 [Cucurbita pepo subsp. pepo]2.0e-4566.67Show/hide
Query:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQPVPTSECPPPPAPPSCDSCVYPSPPPPSS
        M NL+SI+ T  LF+LSKFS  SSAT VA DQ  CSMCS CDNPCQLPPPPPPP                   PTS+CPPPP PPSC +C++PSP PPSS
Subjt:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQPVPTSECPPPPAPPSCDSCVYPSPPPPSS

Query:  VIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIILCL
        V PY PADGGQFPG+APPPPNPILPYYPYYYYSPP+ASG+SVS SW++ PL   II+CL
Subjt:  VIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIILCL

XP_023549397.1 leucine-rich repeat extensin-like protein 6 [Cucurbita pepo subsp. pepo]2.8e-4774.05Show/hide
Query:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDC-PPPPSPPPPPQPVPTSECPPPPAPPSCDSCVYPSPPPPS
        MA+L SIFLTLFL SLSKFS  SSAT  A DQ  CSMCS CDNPCQL   PPPPP +VDC PPPP PP PP P+PT ECPPPP+PPSCD+CVYPSPPPPS
Subjt:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDC-PPPPSPPPPPQPVPTSECPPPPAPPSCDSCVYPSPPPPS

Query:  SVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIIL
        S+ PY P DGGQ+PG+APPPPNPILPY+PYYYY+PPS SGKSV FSW+  PL F + L
Subjt:  SVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIIL

TrEMBL top hitse value%identityAlignment
A0A0A0K5N4 Uncharacterized protein2.4e-5278.75Show/hide
Query:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDC-PPPPSPPP--PPQPVPTSECPPPPAPPSCDSCVYPSPPP
        MANL+SIFLT FL SL+KFS  SSAT VA DQ  CSMCS CDNPCQL PPPPPPPPVV+C PPPPSPPP  PP P+PTS+CPPPP+PPSCD+CVYPSPPP
Subjt:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDC-PPPPSPPP--PPQPVPTSECPPPPAPPSCDSCVYPSPPP

Query:  PSSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIIL
        PSSV PYPP+ GGQFPG+APPPPNPILPY+PYYYYSPPSAS KSV FSW+   L F IIL
Subjt:  PSSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIIL

A0A5D3D2P5 Extensin-21.5e-5478.12Show/hide
Query:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQ---PVPTSECPPPPAPPSCDSCVYPSPPP
        MAN + IFLT FLFSL KFS  SSA+ VA DQ  CSMCS CDNPCQL PPPPPPPPVV+CPPPPSPPPPP    P+PTS+CPPPP+PPSCD+CVYPSPPP
Subjt:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQ---PVPTSECPPPPAPPSCDSCVYPSPPP

Query:  PSSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIIL
        PSSV PYPP+DGGQFPG+APPPPNPILPY+PYYYYSPPSAS KSV FSW++ PL F II+
Subjt:  PSSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIIL

A0A6J1GPW6 leucine-rich repeat extensin-like protein 32.3e-4772.22Show/hide
Query:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQPVP-----TSECPPPPAPPSCDSCVYPSP
        MA+L SIFLTLFL SLSKFS  SS T  A DQ  CSMC+ CDNPCQL   PPPPP +VDCPPPPSPPPPP P P     T ECPPPP+PPSCD+CVYPSP
Subjt:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQPVP-----TSECPPPPAPPSCDSCVYPSP

Query:  PPPSSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIIL
        PPPSS+ PY P DGGQ+PG+APPPPNPILPY+PYYYY+PPS SGKSV FSW+  PL F + L
Subjt:  PPPSSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIIL

A0A6J1JMT5 leucine-rich repeat extensin-like protein 35.9e-5177.99Show/hide
Query:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPP--VVDCPPPPSPPPPPQPVPTSECPPPPAPPSCDSCVYPSPPPP
        MA+L SIFLTLFLFSLSKFS  S AT  A DQ  CSMCS CDNPCQLPPPPPPPPP  VVDCPPPPSPPPPP P P  ECPPPP+PPSCD+CVYPSPPPP
Subjt:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPP--VVDCPPPPSPPPPPQPVPTSECPPPPAPPSCDSCVYPSPPPP

Query:  SSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIIL
        SS+ PY P DGGQ+PGVAPPPPNPILPY+PYYYY+PPS SGKSV FSW+  PL F + L
Subjt:  SSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIIL

A0A6J1KR41 glyceraldehyde-3-phosphate dehydrogenase, testis-specific-like4.5e-4366.88Show/hide
Query:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQPVPTSECPPPPAPPSCDSCVYPSPPPPSS
        MANL+SI+ T  LF+LSKFS  SSAT VA DQ  CSMCS CDNPCQL PPPPPPPP   CPP                PPPP PPSC +CV+PSP PP+S
Subjt:  MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQPVPTSECPPPPAPPSCDSCVYPSPPPPSS

Query:  VIPYPPADGGQFPGVA-PPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIILCL
        V PY PADGGQFPG+A PPPPNPILPYYPYYYYSPP+ASG+SVS SW++ PL   II+CL
Subjt:  VIPYPPADGGQFPGVA-PPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIILCL

SwissProt top hitse value%identityAlignment
Q9LUI1 Leucine-rich repeat extensin-like protein 61.0e-0454.17Show/hide
Query:  GCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQPVPTSECPPPPAPPSCDSCVYPSPPPPSSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPP
        GC  P   PPPPPPPPP    PPPP PPPPP P P     PPP PPS    VYP PPPP  V P PP+    +P   PPPP+P     PY Y SPP
Subjt:  GCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQPVPTSECPPPPAPPSCDSCVYPSPPPPSSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPP

Arabidopsis top hitse value%identityAlignment
AT3G06750.1 hydroxyproline-rich glycoprotein family protein2.9e-1036.05Show/hide
Query:  TVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQPVPTSECPPPPAPPSC--DSCVYPSPPPPSSV--IPYPPADGGQFPG--------
        T  ++  SC+MCS CDNPC                          PVP+S  PPPP P S       Y SPPPPSS   + YPP  GG   G        
Subjt:  TVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQPVPTSECPPPPAPPSC--DSCVYPSPPPPSSV--IPYPPADGGQFPG--------

Query:  ---VAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIILC
             PPPPNPI+PY+P+YY++PP     S      +    F ++LC
Subjt:  ---VAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIILC

AT3G22800.1 Leucine-rich repeat (LRR) family protein7.4e-0654.17Show/hide
Query:  GCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQPVPTSECPPPPAPPSCDSCVYPSPPPPSSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPP
        GC  P   PPPPPPPPP    PPPP PPPPP P P     PPP PPS    VYP PPPP  V P PP+    +P   PPPP+P     PY Y SPP
Subjt:  GCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQPVPTSECPPPPAPPSCDSCVYPSPPPPSSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPP

AT4G13340.1 Leucine-rich repeat (LRR) family protein9.1e-0454.35Show/hide
Query:  PCQLPPPPPPPPPVVDCPPPPSPPPPPQPVPTSECPPPPAPPSCDSCVYPSPPPPSSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPP
        P   PPPPPPPPP V  PPPP PPPPP PV +   PPPP PP     VY SPPPPS   P PP      P   PPPP    P  P  Y SPP
Subjt:  PCQLPPPPPPPPPVVDCPPPPSPPPPPQPVPTSECPPPPAPPSCDSCVYPSPPPPSSVIPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPP

AT4G16140.1 proline-rich family protein2.6e-1140.7Show/hide
Query:  LSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQPVPTSECPPPPA----------PPSCDSCVYPS
        +  F T  LF    F + ++  T  +    C+MC+ CDNPCQ P P PPPPP    PPPPSP        T+ CPPPP+          PP+  S  Y  
Subjt:  LSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQPVPTSECPPPPA----------PPSCDSCVYPS

Query:  PPPPSSVIPY--PPADGGQFPGVAPPPPNPILPYYPYYYYSPP-----SASGKSVSFSWEVWPLAFFIILCL
        PP  SS   Y  PP  GG +P    PPPNPI+PY+P+YYY+PP     S S   + FS+ V   +F +I  L
Subjt:  PPPPSSVIPY--PPADGGQFPGVAPPPPNPILPYYPYYYYSPP-----SASGKSVSFSWEVWPLAFFIILCL

AT5G49280.1 hydroxyproline-rich glycoprotein family protein9.7e-1442.31Show/hide
Query:  SPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQPVPTSECPPPPAPPSC---DSCVYPSP---------PPP----SSVIPY
        S +   T  ++  SC+MCS CDNPC          PV   PPPPSPPPP    PT+ CPPPP+PPS     S  YP P         PPP         Y
Subjt:  SPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQPVPTSECPPPPAPPSC---DSCVYPSP---------PPP----SSVIPY

Query:  PPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKS-VSFSWEVWPLAFFIILCL
        PP   G +P   PPPPNPI+PY+P+YY++PP  SG      S+ +    F + LCL
Subjt:  PPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKS-VSFSWEVWPLAFFIILCL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAATCTCCTCTCCATTTTCCTCACTCTCTTCCTCTTTTCACTCTCCAAATTTTCCTCTCCCTCCTCGGCAACCACCGTGGCCAACGATCAGACCAGCTGCTCCAT
GTGCTCAGGTTGCGACAATCCCTGCCAACTTCCGCCTCCGCCTCCGCCTCCGCCGCCGGTTGTTGACTGCCCGCCTCCTCCCTCGCCGCCGCCCCCTCCACAGCCAGTTC
CCACTTCCGAATGCCCCCCTCCCCCGGCGCCCCCCTCGTGCGACTCGTGCGTCTACCCTTCACCGCCGCCGCCGTCCTCCGTCATTCCCTACCCCCCGGCCGACGGAGGC
CAGTTTCCCGGCGTTGCTCCGCCGCCGCCGAACCCGATTTTACCGTACTATCCTTACTATTACTACAGTCCTCCCTCTGCTTCTGGCAAATCCGTTTCGTTTTCGTGGGA
AGTTTGGCCTTTGGCTTTCTTCATCATTCTTTGCCTCTAA
mRNA sequenceShow/hide mRNA sequence
CTACACTAGTATACTTCATCTTGGCCGGAAAGCCGAAAAATGTGCTCCTTTTCTGGAGTGCTGGCACGGCTTTTTTATACCCAACGTCTACACCAGATTCCGAACCCCAG
CCGATGTGGGACAAGTTGATTCCCGCACGATCGTCCTCGCGTGCGAATAGGCTTCAAATTAGGGAGTTTCACTTTCAACCTCCATGTGAACTGAGTTAGGCTACTTCAAT
AATTTCAATCACAGCTATAATTTGTTAATTTTCTTTTTGGAACTTAAATTCTGTTTTGATTTCAAACTTCAATTCTTCTTCTTATTTATTGGGTTTTCGTCTTTTCATGA
TGGATTGTTCCGTAGAAGCTAAATCACCTTGTATTGGTTGGTGCACATACACATGCCCTTCTCTAAATCTTATAACTCTGCAATTTAATCCAAAATAAATCCAATTTCTC
TCCCTTTATATTCCCATTTCCTCTCCCATTCCACCGTCTACCTTCCAATTCACTTCAATGGCGAATCTCCTCTCCATTTTCCTCACTCTCTTCCTCTTTTCACTCTCCAA
ATTTTCCTCTCCCTCCTCGGCAACCACCGTGGCCAACGATCAGACCAGCTGCTCCATGTGCTCAGGTTGCGACAATCCCTGCCAACTTCCGCCTCCGCCTCCGCCTCCGC
CGCCGGTTGTTGACTGCCCGCCTCCTCCCTCGCCGCCGCCCCCTCCACAGCCAGTTCCCACTTCCGAATGCCCCCCTCCCCCGGCGCCCCCCTCGTGCGACTCGTGCGTC
TACCCTTCACCGCCGCCGCCGTCCTCCGTCATTCCCTACCCCCCGGCCGACGGAGGCCAGTTTCCCGGCGTTGCTCCGCCGCCGCCGAACCCGATTTTACCGTACTATCC
TTACTATTACTACAGTCCTCCCTCTGCTTCTGGCAAATCCGTTTCGTTTTCGTGGGAAGTTTGGCCTTTGGCTTTCTTCATCATTCTTTGCCTCTAATGGAAACTGAATT
CTCCATTGCTGACAGAGAAATGGGGTTCGATTATATTTCTTTTTTGTTTTTTTTTTTTTTTGTTTCTTTTCCTCTGTAATTTCTGCCATTGAAGAACGGGGAAAGAGGAC
AAAGAGGAGATCAGAATAAGCAGGGTAGTGAAATCGAGGAAATTACGTTACGTGTAGATTGATTAATATGCATTTAATTTTATGCTATAAATTAAGACGTATTAATGATT
CTTTATTTTTCTTTGTTTGACTTTCATCATTTTATGGGTTGGAAATCGAAATAGCAATGTATTCAAAGCAAGGAAAAGTCTAATGTAATTATATATAAAGCCGTTTTCAC
ATTTTAGTATTTAGAATTTAT
Protein sequenceShow/hide protein sequence
MANLLSIFLTLFLFSLSKFSSPSSATTVANDQTSCSMCSGCDNPCQLPPPPPPPPPVVDCPPPPSPPPPPQPVPTSECPPPPAPPSCDSCVYPSPPPPSSVIPYPPADGG
QFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLAFFIILCL