; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy05g005790 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g005790
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionlarge ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic
Genome locationChr05:5434462..5440011
RNA-Seq ExpressionLcy05g005790
SyntenyLcy05g005790
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsIPR003772 - Large ribosomal RNA subunit accumulation protein YceD


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067976.1 uncharacterized protein E6C27_scaffold138G001640 [Cucumis melo var. makuwa]2.0e-15484.36Show/hide
Query:  FKMSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEE
        FKM ATFPTSS+VSSSH  EF+ VF  KSKGN SFNSHFR     VPW+F +NIQ SLG DPCI +KSTS+KCVKPTYQS FEDNSIIT+W DQEGDIEE
Subjt:  FKMSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEE

Query:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPEC
        M SPWEGAVIYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKD+PFGTPVQISVDVTRK+KKL LDGIVKTVITLNCYRCCEPAPEC
Subjt:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPEC

Query:  VFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTES
        +FSNFSI+LSEEPIEEP+VINMGIISGQD+FKT + NSDEDD E +DLDDQLYFP V+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNT S
Subjt:  VFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTES

Query:  CNCSKQSVKKNDFGPLGNLKRQMQKS
        CNCSKQ+VKKNDFGPLGNLKR+MQ +
Subjt:  CNCSKQSVKKNDFGPLGNLKRQMQKS

TYK18147.1 uncharacterized protein E5676_scaffold411G00780 [Cucumis melo var. makuwa]5.5e-15283.44Show/hide
Query:  FKMSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEE
        FKM ATFPTSS+VSSSH  EF+ VF  KSKGN SFNS  R      PW+F +NIQ SLG DPCI +KSTS+KCVKPTYQS FEDNSIIT+W DQEGDIEE
Subjt:  FKMSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEE

Query:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPEC
        M SPWEGAVIYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKD+PFGTPVQISVDVTRK+KKL LDGIVKTVITLNCYRCCEPAPEC
Subjt:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPEC

Query:  VFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTES
        +FSNFSI+LSEEPIEEP+VINMGIISGQD+FKT + NSDEDD E +DLDDQLYFP V+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNT S
Subjt:  VFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTES

Query:  CNCSKQSVKKNDFGPLGNLKRQMQKS
        CNCSKQ+VKKNDFGPLGNLKR+MQ +
Subjt:  CNCSKQSVKKNDFGPLGNLKRQMQKS

XP_008451550.1 PREDICTED: uncharacterized protein LOC103492797 isoform X1 [Cucumis melo]4.5e-15484.05Show/hide
Query:  FKMSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEE
        FKM ATFPTSS+VSSSH  EF+ VF  +SKGN SFNSHFR     VPW+F +NIQ SLG DPCI +KSTS+KCVKPTYQS FEDNSIIT+W DQEGDIEE
Subjt:  FKMSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEE

Query:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPEC
        M SPWEGAVIYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKD+PFGTPVQISVDVTRK+KKL LDGIVKTVITLNCYRCCEPAPEC
Subjt:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPEC

Query:  VFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTES
        +FSNFSI+LSEEPIEEP+VINMGIISGQD+FKT + NSDEDD E +DLDDQLYFP V+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNT S
Subjt:  VFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTES

Query:  CNCSKQSVKKNDFGPLGNLKRQMQKS
        CNCSKQ+VKKNDFGPLGNLKR+MQ +
Subjt:  CNCSKQSVKKNDFGPLGNLKRQMQKS

XP_008451552.1 PREDICTED: uncharacterized protein LOC103492797 isoform X2 [Cucumis melo]4.5e-15484.05Show/hide
Query:  FKMSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEE
        FKM ATFPTSS+VSSSH  EF+ VF  +SKGN SFNSHFR     VPW+F +NIQ SLG DPCI +KSTS+KCVKPTYQS FEDNSIIT+W DQEGDIEE
Subjt:  FKMSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEE

Query:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPEC
        M SPWEGAVIYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKD+PFGTPVQISVDVTRK+KKL LDGIVKTVITLNCYRCCEPAPEC
Subjt:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPEC

Query:  VFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTES
        +FSNFSI+LSEEPIEEP+VINMGIISGQD+FKT + NSDEDD E +DLDDQLYFP V+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNT S
Subjt:  VFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTES

Query:  CNCSKQSVKKNDFGPLGNLKRQMQKS
        CNCSKQ+VKKNDFGPLGNLKR+MQ +
Subjt:  CNCSKQSVKKNDFGPLGNLKRQMQKS

XP_038897008.1 large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic-like [Benincasa hispida]6.1e-15987.96Show/hide
Query:  MSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEEMD
        MSATFPTSS+VSSSH NEF+KVF LKSKGN SF+SH     C+VPWKF +NIQ SLG D CIMLKSTS+KCVKPTYQS FEDNSIIT+WED +GDIEEM 
Subjt:  MSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEEMD

Query:  SPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPECVF
        SPWEGAVIYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRV KVVKD+PFGTPVQISVDVTRKEKKL LDGIVKTVITLNCYRCCE APEC+F
Subjt:  SPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPECVF

Query:  SNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTESCN
        SNFSIILSEEPIEEP+VINMGIISGQDMFKTYD NSDEDD EL+DLDDQLYFPL+EKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNT SCN
Subjt:  SNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTESCN

Query:  CSKQSVKKNDFGPLGNLKRQMQKS
        CSKQ+VKKNDFGPLGNLK+QMQK+
Subjt:  CSKQSVKKNDFGPLGNLKRQMQKS

TrEMBL top hitse value%identityAlignment
A0A0A0KAY7 Uncharacterized protein1.7e-15183.33Show/hide
Query:  MSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEEMD
        M ATFPTSS+VSSSH NEF+ VF  KSKG  SF+SHFR     VPW+  +NIQ SLG DPCI +KST++KCVKPTYQS FEDNSIIT+WEDQEGDIEEMD
Subjt:  MSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEEMD

Query:  SPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPECVF
        SPWEGA+IYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKD+PFGTPVQISVDVTRK KKL LDGIVKTVITLNCY CCEPAPEC+F
Subjt:  SPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPECVF

Query:  SNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTESCN
        SNFSIILSEEPIEEP+VINMGIISG+DMFKT + NSDEDD ELIDLDDQLYFP + KEIDISKNIRDILHLEITMN ICDPGCKG+CLNCGINLNT SC 
Subjt:  SNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTESCN

Query:  CSKQSVKKNDFGPLGNLKRQMQKS
        CSKQ+VKKNDFGPLG+LKR+MQ +
Subjt:  CSKQSVKKNDFGPLGNLKRQMQKS

A0A1S3BR50 uncharacterized protein LOC103492797 isoform X22.2e-15484.05Show/hide
Query:  FKMSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEE
        FKM ATFPTSS+VSSSH  EF+ VF  +SKGN SFNSHFR     VPW+F +NIQ SLG DPCI +KSTS+KCVKPTYQS FEDNSIIT+W DQEGDIEE
Subjt:  FKMSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEE

Query:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPEC
        M SPWEGAVIYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKD+PFGTPVQISVDVTRK+KKL LDGIVKTVITLNCYRCCEPAPEC
Subjt:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPEC

Query:  VFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTES
        +FSNFSI+LSEEPIEEP+VINMGIISGQD+FKT + NSDEDD E +DLDDQLYFP V+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNT S
Subjt:  VFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTES

Query:  CNCSKQSVKKNDFGPLGNLKRQMQKS
        CNCSKQ+VKKNDFGPLGNLKR+MQ +
Subjt:  CNCSKQSVKKNDFGPLGNLKRQMQKS

A0A1S3BSU8 uncharacterized protein LOC103492797 isoform X12.2e-15484.05Show/hide
Query:  FKMSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEE
        FKM ATFPTSS+VSSSH  EF+ VF  +SKGN SFNSHFR     VPW+F +NIQ SLG DPCI +KSTS+KCVKPTYQS FEDNSIIT+W DQEGDIEE
Subjt:  FKMSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEE

Query:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPEC
        M SPWEGAVIYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKD+PFGTPVQISVDVTRK+KKL LDGIVKTVITLNCYRCCEPAPEC
Subjt:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPEC

Query:  VFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTES
        +FSNFSI+LSEEPIEEP+VINMGIISGQD+FKT + NSDEDD E +DLDDQLYFP V+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNT S
Subjt:  VFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTES

Query:  CNCSKQSVKKNDFGPLGNLKRQMQKS
        CNCSKQ+VKKNDFGPLGNLKR+MQ +
Subjt:  CNCSKQSVKKNDFGPLGNLKRQMQKS

A0A5A7VN29 Uncharacterized protein9.8e-15584.36Show/hide
Query:  FKMSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEE
        FKM ATFPTSS+VSSSH  EF+ VF  KSKGN SFNSHFR     VPW+F +NIQ SLG DPCI +KSTS+KCVKPTYQS FEDNSIIT+W DQEGDIEE
Subjt:  FKMSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEE

Query:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPEC
        M SPWEGAVIYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKD+PFGTPVQISVDVTRK+KKL LDGIVKTVITLNCYRCCEPAPEC
Subjt:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPEC

Query:  VFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTES
        +FSNFSI+LSEEPIEEP+VINMGIISGQD+FKT + NSDEDD E +DLDDQLYFP V+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNT S
Subjt:  VFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTES

Query:  CNCSKQSVKKNDFGPLGNLKRQMQKS
        CNCSKQ+VKKNDFGPLGNLKR+MQ +
Subjt:  CNCSKQSVKKNDFGPLGNLKRQMQKS

A0A5D3D2J4 Uncharacterized protein2.7e-15283.44Show/hide
Query:  FKMSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEE
        FKM ATFPTSS+VSSSH  EF+ VF  KSKGN SFNS  R      PW+F +NIQ SLG DPCI +KSTS+KCVKPTYQS FEDNSIIT+W DQEGDIEE
Subjt:  FKMSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQSFFEDNSIITEWEDQEGDIEE

Query:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPEC
        M SPWEGAVIYKRN+SVSHVEYCTTLERLGLEKLSTDVSKSRAS MGLRVTK VKD+PFGTPVQISVDVTRK+KKL LDGIVKTVITLNCYRCCEPAPEC
Subjt:  MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLNCYRCCEPAPEC

Query:  VFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTES
        +FSNFSI+LSEEPIEEP+VINMGIISGQD+FKT + NSDEDD E +DLDDQLYFP V+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNT S
Subjt:  VFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTES

Query:  CNCSKQSVKKNDFGPLGNLKRQMQKS
        CNCSKQ+VKKNDFGPLGNLKR+MQ +
Subjt:  CNCSKQSVKKNDFGPLGNLKRQMQKS

SwissProt top hitse value%identityAlignment
A0A1D6HQ92 Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic2.1e-5349.79Show/hide
Query:  FFEDNSIITEWEDQEGDIEE-MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLR-VTKVVKDFPFGTPVQISVDVTRKEKKLWL
        FF      T  E +   I++ + SPWEGAV+Y+R+A+V H+EY +TLERLGL  LS+  S++RA+ +GL   T         TPV +SVDVTR+  +L L
Subjt:  FFEDNSIITEWEDQEGDIEE-MDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLR-VTKVVKDFPFGTPVQISVDVTRKEKKLWL

Query:  DGIVKTVITLNCYRCCEPAPECVFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGEL-IDLDDQLYFPLVEKEIDISKNIRDILHLEITM
        DGIV+TVITL C+RC EPAP+ +F+NFS++L+E+P+EE    ++G I  +D  K     +   DG+  ID DD+L+FP  +KEIDISK+IRD++HLEIT+
Subjt:  DGIVKTVITLNCYRCCEPAPECVFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGEL-IDLDDQLYFPLVEKEIDISKNIRDILHLEITM

Query:  NAICDPGCKGMCLNCGINLN-TESCNCSKQSVK
        +A+C+P CKG+CL CG NLN T SC C  ++V+
Subjt:  NAICDPGCKGMCLNCGINLN-TESCNCSKQSVK

O81417 Protein SEED AND ROOT HAIR PROTECTIVE PROTEIN6.0e-1639.39Show/hide
Query:  LSMASLHAVFLSVLVIASGNYDVMTPNLAKEERLLSTMIGIQGIILYKSGSTIAPLQGGVARITCKTLDEYGYEAASYTFLSDSSDANGYFLATLSPSEV
        LS A+   VF S+++ +   Y     N A  E      I ++GII  KSG    P+QG  ARI C  +D YG E    + LS  +DA GYF+AT+ PS++
Subjt:  LSMASLHAVFLSVLVIASGNYDVMTPNLAKEERLLSTMIGIQGIILYKSGSTIAPLQGGVARITCKTLDEYGYEAASYTFLSDSSDANGYFLATLSPSEV

Query:  EDHKRELKECKAFLELSPLDNCQSPSDLNNGV
            R + +CK +L  SPL +C  P+D+N GV
Subjt:  EDHKRELKECKAFLELSPLDNCQSPSDLNNGV

Q9FZ35 Proline-rich protein 12.3e-0732.26Show/hide
Query:  IQGIILYKSGSTIAPLQGGVARITCKTLDEYGYEAASYTFLSDSSDANGYFLATLSPSEVEDHKRELKECKAFLELSPLDNCQSPSDLNNGVS
        + GIIL K+G    P+QG  A+I C     Y          SD +D  GYF   L+      H + L  C+  L  SP++ C++P+++N G++
Subjt:  IQGIILYKSGSTIAPLQGGVARITCKTLDEYGYEAASYTFLSDSSDANGYFLATLSPSEVEDHKRELKECKAFLELSPLDNCQSPSDLNNGVS

Q9LT27 Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic8.2e-8262.35Show/hide
Query:  QSFFEDNSIITEWEDQEGDIEEMDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWL
        +SF E ++I  +WEDQE +IE+  SPWEG+V+Y+RNASV+HVEYCTTLERLGL +LSTDVSK RAS MGLRVTK VKD+P GTPVQ+SVDV RK+KKL L
Subjt:  QSFFEDNSIITEWEDQEGDIEEMDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWL

Query:  DGIVKTVITLNCYRCCEPAPECVFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMN
        DGIV+TVITL C RC E   E +FSNFS++L+EEP+EEP+VI++G   G D  K    + D++D   ID +D+L+FP   KEIDISK+IRD++HLEIT+ 
Subjt:  DGIVKTVITLNCYRCCEPAPECVFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMN

Query:  AICDPGCKGMCLNCGINLNTESCNCSKQSVKKNDFGPLGNLKRQMQK
        AICD  CKGMCL CG NLN   C+C ++  K   +GPLGNL+ QMQ+
Subjt:  AICDPGCKGMCLNCGINLNTESCNCSKQSVKKNDFGPLGNLKRQMQK

Arabidopsis top hitse value%identityAlignment
AT1G54970.1 proline-rich protein 11.6e-0832.26Show/hide
Query:  IQGIILYKSGSTIAPLQGGVARITCKTLDEYGYEAASYTFLSDSSDANGYFLATLSPSEVEDHKRELKECKAFLELSPLDNCQSPSDLNNGVS
        + GIIL K+G    P+QG  A+I C     Y          SD +D  GYF   L+      H + L  C+  L  SP++ C++P+++N G++
Subjt:  IQGIILYKSGSTIAPLQGGVARITCKTLDEYGYEAASYTFLSDSSDANGYFLATLSPSEVEDHKRELKECKAFLELSPLDNCQSPSDLNNGVS

AT2G47530.1 Pollen Ole e 1 allergen and extensin family protein4.5e-1138.05Show/hide
Query:  VMTPNLAKEERLLSTMIGIQGIILYKSGSTIAPLQGGVARITCKTLDEYGYEAASYTFLSDSSDANGYF-LATLSPSEVEDHK-RELKECKAFLELSPLD
        V TP L K     +  I I+G IL KSG    P+QGG  ++ C  +D YG   A  T  S  +D  GYF   T   S    HK   +  CK  LE SP+ 
Subjt:  VMTPNLAKEERLLSTMIGIQGIILYKSGSTIAPLQGGVARITCKTLDEYGYEAASYTFLSDSSDANGYF-LATLSPSEVEDHK-RELKECKAFLELSPLD

Query:  NCQSPSDLNNGVS
         C++P+++N GV+
Subjt:  NCQSPSDLNNGVS

AT2G47540.1 Pollen Ole e 1 allergen and extensin family protein2.6e-3059.05Show/hide
Query:  EERLLSTMIGIQGIILYKSGSTIAPLQGGVARITCKTLDEYGYEAASYTFLSDSSDANGYFLATLSPSEVEDHKR--ELKECKAFLELSPLDNCQSPSDL
        E  LLS+MIG+QG+I  K GS + P+QG VAR+TC+  DEYGYEA   T LS ++DA GYFLATLS SEV+D+K+  ++KEC+AFLELSP D C  P+++
Subjt:  EERLLSTMIGIQGIILYKSGSTIAPLQGGVARITCKTLDEYGYEAASYTFLSDSSDANGYFLATLSPSEVEDHKR--ELKECKAFLELSPLDNCQSPSDL

Query:  NNGVS
        N G+S
Subjt:  NNGVS

AT3G19810.1 Protein of unknown function (DUF177)5.8e-8362.35Show/hide
Query:  QSFFEDNSIITEWEDQEGDIEEMDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWL
        +SF E ++I  +WEDQE +IE+  SPWEG+V+Y+RNASV+HVEYCTTLERLGL +LSTDVSK RAS MGLRVTK VKD+P GTPVQ+SVDV RK+KKL L
Subjt:  QSFFEDNSIITEWEDQEGDIEEMDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWL

Query:  DGIVKTVITLNCYRCCEPAPECVFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMN
        DGIV+TVITL C RC E   E +FSNFS++L+EEP+EEP+VI++G   G D  K    + D++D   ID +D+L+FP   KEIDISK+IRD++HLEIT+ 
Subjt:  DGIVKTVITLNCYRCCEPAPECVFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMN

Query:  AICDPGCKGMCLNCGINLNTESCNCSKQSVKKNDFGPLGNLKRQMQK
        AICD  CKGMCL CG NLN   C+C ++  K   +GPLGNL+ QMQ+
Subjt:  AICDPGCKGMCLNCGINLNTESCNCSKQSVKKNDFGPLGNLKRQMQK

AT4G02270.1 root hair specific 134.2e-1739.39Show/hide
Query:  LSMASLHAVFLSVLVIASGNYDVMTPNLAKEERLLSTMIGIQGIILYKSGSTIAPLQGGVARITCKTLDEYGYEAASYTFLSDSSDANGYFLATLSPSEV
        LS A+   VF S+++ +   Y     N A  E      I ++GII  KSG    P+QG  ARI C  +D YG E    + LS  +DA GYF+AT+ PS++
Subjt:  LSMASLHAVFLSVLVIASGNYDVMTPNLAKEERLLSTMIGIQGIILYKSGSTIAPLQGGVARITCKTLDEYGYEAASYTFLSDSSDANGYFLATLSPSEV

Query:  EDHKRELKECKAFLELSPLDNCQSPSDLNNGV
            R + +CK +L  SPL +C  P+D+N GV
Subjt:  EDHKRELKECKAFLELSPLDNCQSPSDLNNGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTGTTCTCAAGCTCTTGTCAATGGCTTCTTTACATGCAGTTTTCTTGTCAGTTTTGGTCATTGCTAGTGGGAATTATGATGTTATGACACCCAATTTGGCAAA
GGAAGAAAGGCTTCTCTCCACCATGATTGGCATCCAAGGGATAATTCTTTACAAATCTGGCTCAACAATTGCCCCTCTTCAAGGAGGTGTGGCAAGAATAACATGTAAAA
CATTGGATGAGTATGGTTATGAGGCAGCTTCTTACACCTTTTTGAGTGATTCATCTGATGCAAATGGCTACTTCTTGGCAACACTATCTCCTTCAGAGGTTGAAGATCAC
AAGAGGGAATTGAAAGAGTGCAAGGCTTTTCTTGAGCTCTCACCATTGGACAACTGTCAATCTCCTTCTGATCTCAACAATGGAGTCTCTGTGTTTAAGATGTCAGCTAC
ATTCCCCACCTCATCCATAGTTTCATCTTCTCATTTCAATGAATTTGTCAAGGTTTTCTGCTTGAAATCCAAAGGGAATGCTTCTTTCAATTCGCATTTCCGCTTTGTTG
GATGTAAAGTTCCATGGAAATTTAGGAAAAATATCCAGACAAGCTTGGGAAGTGACCCATGTATTATGCTGAAATCTACTTCCCTAAAGTGTGTGAAACCTACTTACCAG
TCCTTTTTTGAAGACAATTCAATAATTACTGAATGGGAGGATCAAGAAGGGGACATTGAAGAGATGGACTCACCTTGGGAAGGAGCAGTTATTTACAAGAGAAACGCTTC
GGTTTCTCATGTGGAGTACTGCACAACATTAGAGAGGCTTGGATTAGAAAAGCTTTCGACTGATGTCTCGAAATCTAGAGCATCCAAGATGGGACTACGTGTAACGAAGG
TTGTGAAAGATTTTCCCTTTGGAACGCCTGTTCAAATCTCTGTTGATGTTACTAGGAAAGAAAAAAAGTTGTGGCTCGATGGGATTGTCAAAACTGTCATCACTCTCAAT
TGCTATAGGTGTTGTGAACCTGCTCCTGAATGCGTTTTCTCGAATTTCTCAATTATACTAAGCGAAGAACCGATTGAAGAACCTGAGGTCATAAATATGGGAATCATCAG
CGGGCAGGATATGTTCAAGACATATGATGTAAATAGTGATGAAGATGATGGAGAGTTGATTGATTTGGATGATCAACTCTATTTTCCTCTTGTAGAGAAAGAAATAGATA
TATCAAAGAACATCAGAGACATTTTGCATCTGGAAATTACTATGAATGCGATCTGCGATCCAGGATGCAAAGGTATGTGTCTGAATTGTGGTATAAATTTGAATACTGAA
AGCTGTAACTGTAGTAAGCAGTCTGTAAAGAAGAACGATTTTGGTCCTCTTGGAAATTTGAAGAGGCAAATGCAGAAATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCTGTTCTCAAGCTCTTGTCAATGGCTTCTTTACATGCAGTTTTCTTGTCAGTTTTGGTCATTGCTAGTGGGAATTATGATGTTATGACACCCAATTTGGCAAA
GGAAGAAAGGCTTCTCTCCACCATGATTGGCATCCAAGGGATAATTCTTTACAAATCTGGCTCAACAATTGCCCCTCTTCAAGGAGGTGTGGCAAGAATAACATGTAAAA
CATTGGATGAGTATGGTTATGAGGCAGCTTCTTACACCTTTTTGAGTGATTCATCTGATGCAAATGGCTACTTCTTGGCAACACTATCTCCTTCAGAGGTTGAAGATCAC
AAGAGGGAATTGAAAGAGTGCAAGGCTTTTCTTGAGCTCTCACCATTGGACAACTGTCAATCTCCTTCTGATCTCAACAATGGAGTCTCTGTGTTTAAGATGTCAGCTAC
ATTCCCCACCTCATCCATAGTTTCATCTTCTCATTTCAATGAATTTGTCAAGGTTTTCTGCTTGAAATCCAAAGGGAATGCTTCTTTCAATTCGCATTTCCGCTTTGTTG
GATGTAAAGTTCCATGGAAATTTAGGAAAAATATCCAGACAAGCTTGGGAAGTGACCCATGTATTATGCTGAAATCTACTTCCCTAAAGTGTGTGAAACCTACTTACCAG
TCCTTTTTTGAAGACAATTCAATAATTACTGAATGGGAGGATCAAGAAGGGGACATTGAAGAGATGGACTCACCTTGGGAAGGAGCAGTTATTTACAAGAGAAACGCTTC
GGTTTCTCATGTGGAGTACTGCACAACATTAGAGAGGCTTGGATTAGAAAAGCTTTCGACTGATGTCTCGAAATCTAGAGCATCCAAGATGGGACTACGTGTAACGAAGG
TTGTGAAAGATTTTCCCTTTGGAACGCCTGTTCAAATCTCTGTTGATGTTACTAGGAAAGAAAAAAAGTTGTGGCTCGATGGGATTGTCAAAACTGTCATCACTCTCAAT
TGCTATAGGTGTTGTGAACCTGCTCCTGAATGCGTTTTCTCGAATTTCTCAATTATACTAAGCGAAGAACCGATTGAAGAACCTGAGGTCATAAATATGGGAATCATCAG
CGGGCAGGATATGTTCAAGACATATGATGTAAATAGTGATGAAGATGATGGAGAGTTGATTGATTTGGATGATCAACTCTATTTTCCTCTTGTAGAGAAAGAAATAGATA
TATCAAAGAACATCAGAGACATTTTGCATCTGGAAATTACTATGAATGCGATCTGCGATCCAGGATGCAAAGGTATGTGTCTGAATTGTGGTATAAATTTGAATACTGAA
AGCTGTAACTGTAGTAAGCAGTCTGTAAAGAAGAACGATTTTGGTCCTCTTGGAAATTTGAAGAGGCAAATGCAGAAATCTTAA
Protein sequenceShow/hide protein sequence
MAAVLKLLSMASLHAVFLSVLVIASGNYDVMTPNLAKEERLLSTMIGIQGIILYKSGSTIAPLQGGVARITCKTLDEYGYEAASYTFLSDSSDANGYFLATLSPSEVEDH
KRELKECKAFLELSPLDNCQSPSDLNNGVSVFKMSATFPTSSIVSSSHFNEFVKVFCLKSKGNASFNSHFRFVGCKVPWKFRKNIQTSLGSDPCIMLKSTSLKCVKPTYQ
SFFEDNSIITEWEDQEGDIEEMDSPWEGAVIYKRNASVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRVTKVVKDFPFGTPVQISVDVTRKEKKLWLDGIVKTVITLN
CYRCCEPAPECVFSNFSIILSEEPIEEPEVINMGIISGQDMFKTYDVNSDEDDGELIDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTE
SCNCSKQSVKKNDFGPLGNLKRQMQKS