CuGenDBv2

Gene ID	Lcy05g006540
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	rRNA-processing protein FYV7
Genome location	Chr05:6136368..6140442
RNA-Seq Expression	Lcy05g006540
Synteny	Lcy05g006540
Gene Ontology terms	NA
InterPro domains	IPR013730 - Fyv7/TAP26

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004136058.2 uncharacterized protein LOC101216293 [Cucumis sativus]

5.7e-79

86.39

Show/hide

Query:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK
        MK   GK E  +R KS FM N KHNN+KRLGGK LSLEAFANAKSTT YYNPALIKKQREFYKNAKHV+KYKKLVKHQNQ +ERPSSSTV LVEGENE K
Subjt:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK

Query:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
        FENQTN RC KERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH

XP_008451439.1 PREDICTED: uncharacterized protein LOC103492733 [Cucumis melo]

7.9e-81

86.91

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Query:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK
        MK P GK E ++R KS FM   KHNN+KRLGGK+LSLEAFANAKSTT YYNPALIKKQREFYKNAKHV+KYKKLVKHQNQ++ERPSSSTVGLVEGENE K
Subjt:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK

Query:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
        FENQTN RC KERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH

XP_022953215.1 uncharacterized protein LOC111455827 [Cucurbita moschata]

9.7e-79

86.84

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Query:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK
        MKK TG+DE Q+RPKS FMKNKKH NMKRLGGK LSLEAFAN KSTT YYNPALIKKQREFYKNAKHVSKYKKLVKHQN  +ERPSSSTVGLVEGEN  K
Subjt:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK

Query:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMN
         ENQTN R  KERNKG+PSLQ LYERKH+EKEKARMEKEAIIAAKKEEQE+AKARRN+TREKM KRTQKGQPVMKYRIEHLL+TIGASMN
Subjt:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMN

XP_022960530.1 uncharacterized protein LOC111461241 [Cucurbita moschata]

2.8e-78

85.86

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Query:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK
        MK   GKDE+Q+R KS FMK  KH NMKRLGGK  S +AFANAKSTT YYNPALIKKQREFYKNAKHV+KYKKLVKHQN ++ERPSSS+VGLVEGENEMK
Subjt:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK

Query:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
        FEN+TN R   ERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
Subjt:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH

XP_038876713.1 uncharacterized protein LOC120069103 [Benincasa hispida]

1.3e-78

86.98

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Query:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK
        MK PTGKDE Q+R  S FMK+KKH NMKRLGGK LSLEAFANAKSTT YYNPALIKKQREFYKNAKHVSKYKKLVK+QNQ++ERPSSSTVGLVE ENE K
Subjt:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK

Query:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETI-GASMNH
        FEN TN R  KERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEEQE+AKARRN+TREKMFKRTQKGQPVMKYRIEHLLETI GASM H
Subjt:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETI-GASMNH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K7L3 Uncharacterized protein

2.8e-79

86.39

Show/hide

Query:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK
        MK   GK E  +R KS FM N KHNN+KRLGGK LSLEAFANAKSTT YYNPALIKKQREFYKNAKHV+KYKKLVKHQNQ +ERPSSSTV LVEGENE K
Subjt:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK

Query:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
        FENQTN RC KERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH

A0A1S3BRH3 uncharacterized protein LOC103492733

3.8e-81

86.91

Show/hide

Query:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK
        MK P GK E ++R KS FM   KHNN+KRLGGK+LSLEAFANAKSTT YYNPALIKKQREFYKNAKHV+KYKKLVKHQNQ++ERPSSSTVGLVEGENE K
Subjt:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK

Query:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
        FENQTN RC KERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH

A0A6J1GP14 uncharacterized protein LOC111455827

4.7e-79

86.84

Show/hide

Query:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK
        MKK TG+DE Q+RPKS FMKNKKH NMKRLGGK LSLEAFAN KSTT YYNPALIKKQREFYKNAKHVSKYKKLVKHQN  +ERPSSSTVGLVEGEN  K
Subjt:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK

Query:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMN
         ENQTN R  KERNKG+PSLQ LYERKH+EKEKARMEKEAIIAAKKEEQE+AKARRN+TREKM KRTQKGQPVMKYRIEHLL+TIGASMN
Subjt:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMN

A0A6J1H9B9 uncharacterized protein LOC111461241

1.4e-78

85.86

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Query:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK
        MK   GKDE+Q+R KS FMK  KH NMKRLGGK  S +AFANAKSTT YYNPALIKKQREFYKNAKHV+KYKKLVKHQN ++ERPSSS+VGLVEGENEMK
Subjt:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK

Query:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
        FEN+TN R   ERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
Subjt:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH

A0A6J1KV89 uncharacterized protein LOC111497895

8.9e-78

84.82

Show/hide

Query:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK
        MK   GKDE+Q+R KS F K  KH NMKRLGGK  S +AFANAKSTT YYNPA IKKQREFYKNAKHV+KYKKLVKHQN ++ERPS+STVGLVEGENEMK
Subjt:  MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMK

Query:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
        FEN+TN R   ERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
Subjt:  FENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G03180.1 CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast hits to 687 proteins in 142 species: Archae - 2; Bacteria - 28; Metazoa - 200; Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes - 506 (source: NCBI BLink).

4.3e-32

45.98

Show/hide

Query:  KSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMKFENQTNRRCAKERN
        KS   + KK  NM+RLGG  LSL+ FAN KS    YNP+LIKKQ+EFYKNAK+VSK++K +K QN  D+  +  T  + + +++ K + ++N+R      
Subjt:  KSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMKFENQTNRRCAKERN

Query:  KGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS
             ++ LY++  +E E+ R E+EA+  AKKE +E+A++RR   + KM ++T+ GQPVMKYRIEHLLE+I  S
Subjt:  KGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAGAAGCCAACTGGAAAAGACGAACAACAGAGTCGCCCCAAATCGACATTTATGAAGAACAAGAAACACAACAATATGAAACGATTGGGAGGGAAGAGTCTTTCACT
CGAAGCATTTGCGAATGCGAAATCAACTACTGGTTACTATAATCCAGCCTTGATAAAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAGCAAGTATAAGAAGT
TGGTAAAGCATCAAAATCAGCGGGATGAGAGGCCCTCTAGCTCAACTGTTGGACTTGTCGAGGGTGAAAACGAAATGAAATTCGAGAATCAGACGAACAGAAGATGTGCG
AAAGAAAGGAATAAAGGCGTACCTAGTCTCCAGGGACTGTATGAGAGAAAGCATCAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATCGCAGCGAAAAAGGA
AGAACAAGAAAAGGCTAAAGCTAGACGAAACTCCACTAGGGAAAAAATGTTCAAAAGGACACAAAAAGGTCAGCCTGTTATGAAGTACCGAATTGAGCATCTTTTGGAGA
CTATTGGAGCCTCAATGAACCACTGA

mRNA sequence

Show/hide mRNA sequence

GGAAGCTGTTTCACTTTCCCTCCCTGTTCTGTTTTTTGCCCTAATTCTAATTGTTCTTAATTTCATTGAATCTCTCAGCAAGTTCTCTATCCAACAATGAAGAAGGGAAC
TGGAAAAGACGAAGAAAAGAGTCGCCCCAAATCGACATTTATGAAGAACAAGAAGAATATGAAACGATTGGGAGGGAAGGGTCTTTCACTCGAAGCGTTTGCGAATGCGA
AATCAACAACCGATTACTATAATCCAGCTTTGATAAGTATGATTCTGCTGAAATTTTGTTAATTTTTACTTCTTTTTGTCTTAATGATCGTCTGATAGCCCTTTAGGTTT
TTTTGCTGCTCACTCTTGACGGCTATGTGAAATCTAGGTTTTGGGTTTTTGTTTAAATGTCATGCGGCTAGAAGTGGTGTTGTAAATTCAGTATTTGGGTGGAGAATGAA
AATTACAGGGAAAAATTTAAATTCATTGTAGTTCGATTGGGGGAATACATTGCAAAATCTAGTTTGATGGTTTGCTTTAGGAATTGGAAATTACCGACTGAATGTGGAAG
TTGCTAAAATTGATATATATAATCAAATTGCTAAAATTGTGGAAGTTGGTAAGAGAATTAAGAAAATTGATATATATATGAATTGAATTTTAATTATGAAAGATAATTCA
CAAAATATTTTAGGGTTGAATTTGATTGTGAAAGGAATTCACACCAAGAATAGGATTTCGTCTGTGTCTTTCCTTTCTCTTCTCATTCACTGTAAAAAAGCCCTCTTTTG
TTTCTCTGATCTCTGTTCACCGAATTCTCGCTGTCTCCCTTCTTGTTCGTGAACACTGTCTCTTTTCTTTCTTCTTCACCCAAATTTCAGTCTCCTTTGGATTTCTTCTT
CCCTCTTTTCTTTCTCTCTCTTTTCTCATTCTACGACGTCGGCACAAGCTTAAGCTTTCCCTTTCCCTTTCCCTTTCCTTTCTTGTTCTTCAAACCCTCACAAAACTAAA
CTTCTGAAAACAAAGTCTCATCTCCAGTCGTCGGTTTCAGAGAGCCTTCGAAAACTACCAAACACGATTTTCGCCCATCCATGAACAGCCCTAGTGGGAGGAGTATTTAT
TTTGACTATCTGACCACACAACTCCTCCTCCTCCCATCTCCTTCCCTTTCCTTCTCTGTTTTGCCCTAATTGTTCTTAATCTCATACCATCTCTCACCAAATTCTCTATT
CAACAATGAAGAAGCCAACTGGAAAAGACGAACAACAGAGTCGCCCCAAATCGACATTTATGAAGAACAAGAAACACAACAATATGAAACGATTGGGAGGGAAGAGTCTT
TCACTCGAAGCATTTGCGAATGCGAAATCAACTACTGGTTACTATAATCCAGCCTTGATAAAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAGCAAGTATAA
GAAGTTGGTAAAGCATCAAAATCAGCGGGATGAGAGGCCCTCTAGCTCAACTGTTGGACTTGTCGAGGGTGAAAACGAAATGAAATTCGAGAATCAGACGAACAGAAGAT
GTGCGAAAGAAAGGAATAAAGGCGTACCTAGTCTCCAGGGACTGTATGAGAGAAAGCATCAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATCGCAGCGAAA
AAGGAAGAACAAGAAAAGGCTAAAGCTAGACGAAACTCCACTAGGGAAAAAATGTTCAAAAGGACACAAAAAGGTCAGCCTGTTATGAAGTACCGAATTGAGCATCTTTT
GGAGACTATTGGAGCCTCAATGAACCACTGAGGCTTTGGCTGTTTTGACTGTAGTTTGTGAAAGAAAATTTTGTCTCTTTAGGATGTATATTTCTCTTGTACCTTTTTAG
ATTGCTTCATTATACAATCAAATTCTAGTGTATTACATTTTACAATGGATTCCAAATGATCCATATGCTTAACATTATCATATTGCCGTCCCTTGGGAAGGTCTTGGATT
TAAGTCTCCAAGTCTTTAGTGGAATGTTCAATAAGAAAATATTCTCGTCTTTTAGAGTTTGTGTTCACACGTAAAGTCTTGTCGCAGC

Protein sequence

Show/hide protein sequence

MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMKFENQTNRRCA
KERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH

Lcy05g006540 (gene) of Sponge gourd (P93075) v1 genome