| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA3456600.1 reverse transcriptase [Gossypium australe] | 6.9e-17 | 30.2 | Show/hide |
Query: WICDGAWAIWNDRNNFKHNKPLPEVNEKCDWIIHYINEYQGGIVRLILTEAGVRK-RNSPRQVDNVGMRIHVDVANYDIHAGVEGYGVVIRDHSGQVKAA
+ C WAIW DRN H K E D++ +Y+ E G +++ + V++ ++ P Q M+I+ D A +D + GVV+RD+ G V A+
Subjt: WICDGAWAIWNDRNNFKHNKPLPEVNEKCDWIIHYINEYQGGIVRLILTEAGVRK-RNSPRQVDNVGMRIHVDVANYDIHAGVEGYGVVIRDHSGQVKAA
Query: MQGHHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLNDEIEEETSVSAILWDINSMKSKFSKIMFLHIFRKQNMIAHNLAREGLRGHAQ
H+ ++S AEA A E +RL M+ D+ I DSL++I + + + + + ++ I+ M+S F I F I R +N +AH +A E L+ +
Subjt: MQGHHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLNDEIEEETSVSAILWDINSMKSKFSKIMFLHIFRKQNMIAHNLAREGLRGHAQ
Query: IF
+
Subjt: IF
|
|
| MBA0756060.1 hypothetical protein [Gossypium gossypioides] | 2.6e-16 | 30.92 | Show/hide |
Query: CDGAWAIWNDRNNFKHNKPLPEVNEKCDWIIHYINEYQG-GIVRLILTEAGVRKRNSPRQVDNVGMRIHVDVANYDIHAGVEGYGVVIRDHSGQVKAAMQ
C W IW RN H + + + I Y+ E +G +L T A R + +++G I DVA +DI G+V+RD + +KA+
Subjt: CDGAWAIWNDRNNFKHNKPLPEVNEKCDWIIHYINEYQG-GIVRLILTEAGVRKRNSPRQVDNVGMRIHVDVANYDIHAGVEGYGVVIRDHSGQVKAAMQ
Query: GHHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLNDEIEEETSVSAILWDINSMKSKFSKIMFLHIFRKQNMIAHNLAREGLRGHAQIF
H ++SS AEA A LE +L M + +TI DS +I+ + +++ + AI+ DI S KS+F +I F R +N AHNLA++ L+ +++
Subjt: GHHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLNDEIEEETSVSAILWDINSMKSKFSKIMFLHIFRKQNMIAHNLAREGLRGHAQIF
Query: GFKLFPN
PN
Subjt: GFKLFPN
|
|
| XP_012487767.1 PREDICTED: uncharacterized protein LOC105800965 [Gossypium raimondii] | 2.6e-16 | 27.83 | Show/hide |
Query: IKEWDSLSIQDRLLDLKDSHNETVFSWICDGAWAIWNDRNNFKHNKPL---PEVNEKCDWIIHYINEYQGGIVRLILTEAGVRKRNSPRQVDNVGMRIHV
+ E+ S ++ L + D + C W +W RN H K ++++K + + +G + TEA R R++ R++ I
Subjt: IKEWDSLSIQDRLLDLKDSHNETVFSWICDGAWAIWNDRNNFKHNKPL---PEVNEKCDWIIHYINEYQGGIVRLILTEAGVRKRNSPRQVDNVGMRIHV
Query: DVANYDIHAGVEGYGVVIRDHSGQVKAAMQGHHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLNDEIEEETSVSAILWDINSMKSKFS
D A +DI G+V+RD G ++A+ H ++SSP AEA A LE +L M + +TI DS ++I +++ + AI+ DI S +S+F
Subjt: DVANYDIHAGVEGYGVVIRDHSGQVKAAMQGHHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLNDEIEEETSVSAILWDINSMKSKFS
Query: KIMFLHIFRKQNMIAHNLAREGLRGHAQIF
+I F I R +N AH LA++ L +++
Subjt: KIMFLHIFRKQNMIAHNLAREGLRGHAQIF
|
|
| XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia] | 1.0e-15 | 26.25 | Show/hide |
Query: FRCYRAKKICRSIHPDIK-IKEWDSLSIQDRLLDLKDSHNETVFSWICDGAWAIWNDRNNFKHNKPLPEVNEKCDWIIHYINEYQGGIVRLILTEAGVRK
F C RA++I R++ P + + D++S + L + + W IWNDRN+ H K + V KC+W+ +++ + + ++ R
Subjt: FRCYRAKKICRSIHPDIK-IKEWDSLSIQDRLLDLKDSHNETVFSWICDGAWAIWNDRNNFKHNKPLPEVNEKCDWIIHYINEYQGGIVRLILTEAGVRK
Query: RNSPRQV-------DNVGMRIHVDVANYDIHAGVEGYGVVIRDHSGQVKAAMQGHHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLND
+++ R V +V ++++ D A +G +IRD S + AA SPL AE + +LEGL+ A + + SDSL I ++ +
Subjt: RNSPRQV-------DNVGMRIHVDVANYDIHAGVEGYGVVIRDHSGQVKAAMQGHHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLND
Query: EIEEETSVSAILWDINSMKSKFSKIMFLHIFRKQNMIAHNLAREGLRG----HAQIFGF
EI + +I ++ F+ I F H R+ N AH LA+ G+ +A +F F
Subjt: EIEEETSVSAILWDINSMKSKFSKIMFLHIFRKQNMIAHNLAREGLRG----HAQIFGF
|
|
| XP_040952344.1 uncharacterized protein LOC121218720 [Gossypium hirsutum] | 1.2e-16 | 30.57 | Show/hide |
Query: CDGAWAIWNDRNNFKHNKPLPEVNEKCDWIIHYINEYQGGIVRLILTEAGVRKRNSPRQVDNVGMRIHVDVANYDIHAGVEGYGVVIRDHSGQVKAAMQG
C W IWN RN H K + + + +++ E +G R + T A VR S + + + I D A +DI+ + +V+R +G++ A+
Subjt: CDGAWAIWNDRNNFKHNKPLPEVNEKCDWIIHYINEYQGGIVRLILTEAGVRKRNSPRQVDNVGMRIHVDVANYDIHAGVEGYGVVIRDHSGQVKAAMQG
Query: HHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLNDEIEEETSVSAILWDINSMKSKFSKIMFLHIFRKQNMIAHNLAREGLR
H ++SSP EA A LE L M + +T+ DS ++I + +++ + AI+ DI + K++F +I+F +I R +N+ AH+LA+E LR
Subjt: HHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLNDEIEEETSVSAILWDINSMKSKFSKIMFLHIFRKQNMIAHNLAREGLR
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5B6U6G4 Reverse transcriptase | 8.2e-16 | 33.01 | Show/hide |
Query: CDGAWAIWNDRNNFKHNKPLPEVNEKCDWIIHYINEYQGGIVRLILTEA-GVRKRNSPRQVDNVGMRIHVDVANYDIHAGVEGYGVVIRDHSGQVKAAMQ
C WAIW DRN+ H+K E +++ YI E G T A +R R+ Q G++I+ D A +D GVV RD +GQV +
Subjt: CDGAWAIWNDRNNFKHNKPLPEVNEKCDWIIHYINEYQGGIVRLILTEA-GVRKRNSPRQVDNVGMRIHVDVANYDIHAGVEGYGVVIRDHSGQVKAAMQ
Query: GHHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLNDEIEEETSVSAILWDINSMKSKFSKIMFLHIFRKQNMIAHNLAREGLRGHAQIF
HQ + S AEA A ++A M + I I DSLS+I N +++ + A ++DI MK++ S + F + R N +AH LA E LR + +
Subjt: GHHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLNDEIEEETSVSAILWDINSMKSKFSKIMFLHIFRKQNMIAHNLAREGLRGHAQIF
Query: GFKLFP
F P
Subjt: GFKLFP
|
|
| A0A5B6UEY6 Reverse transcriptase | 3.3e-17 | 30.2 | Show/hide |
Query: WICDGAWAIWNDRNNFKHNKPLPEVNEKCDWIIHYINEYQGGIVRLILTEAGVRK-RNSPRQVDNVGMRIHVDVANYDIHAGVEGYGVVIRDHSGQVKAA
+ C WAIW DRN H K E D++ +Y+ E G +++ + V++ ++ P Q M+I+ D A +D + GVV+RD+ G V A+
Subjt: WICDGAWAIWNDRNNFKHNKPLPEVNEKCDWIIHYINEYQGGIVRLILTEAGVRK-RNSPRQVDNVGMRIHVDVANYDIHAGVEGYGVVIRDHSGQVKAA
Query: MQGHHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLNDEIEEETSVSAILWDINSMKSKFSKIMFLHIFRKQNMIAHNLAREGLRGHAQ
H+ ++S AEA A E +RL M+ D+ I DSL++I + + + + + ++ I+ M+S F I F I R +N +AH +A E L+ +
Subjt: MQGHHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLNDEIEEETSVSAILWDINSMKSKFSKIMFLHIFRKQNMIAHNLAREGLRGHAQ
Query: IF
+
Subjt: IF
|
|
| A0A5B6UI00 Reverse transcriptase | 6.3e-16 | 29.95 | Show/hide |
Query: CDGAWAIWNDRNNFKHNKPLPEVNEKCDWIIHYINEYQGGIVRLILTEAGVRKRNSPRQVDNV--------GMRIHVDVANYDIHAGVEGYGVVIRDHSG
C WAIW +RN H E +++ Y+ E + G++K NV G+ I+ D A + + GVV+RD SG
Subjt: CDGAWAIWNDRNNFKHNKPLPEVNEKCDWIIHYINEYQGGIVRLILTEAGVRKRNSPRQVDNV--------GMRIHVDVANYDIHAGVEGYGVVIRDHSG
Query: QVKAAMQGHHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLNDEIEEETSVSAILWDINSMKSKFSKIMFLHIFRKQNMIAHNLAREGL
QV ++ H+ + S AEA A ++A ME +ITI DSL++I +++ + ++++DI MK + SKI F +I R+ N +AH LA E L
Subjt: QVKAAMQGHHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLNDEIEEETSVSAILWDINSMKSKFSKIMFLHIFRKQNMIAHNLAREGL
Query: RGHAQIF
+ ++I+
Subjt: RGHAQIF
|
|
| A0A6J1DX30 uncharacterized protein LOC111024874 | 4.8e-16 | 26.25 | Show/hide |
Query: FRCYRAKKICRSIHPDIK-IKEWDSLSIQDRLLDLKDSHNETVFSWICDGAWAIWNDRNNFKHNKPLPEVNEKCDWIIHYINEYQGGIVRLILTEAGVRK
F C RA++I R++ P + + D++S + L + + W IWNDRN+ H K + V KC+W+ +++ + + ++ R
Subjt: FRCYRAKKICRSIHPDIK-IKEWDSLSIQDRLLDLKDSHNETVFSWICDGAWAIWNDRNNFKHNKPLPEVNEKCDWIIHYINEYQGGIVRLILTEAGVRK
Query: RNSPRQV-------DNVGMRIHVDVANYDIHAGVEGYGVVIRDHSGQVKAAMQGHHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLND
+++ R V +V ++++ D A +G +IRD S + AA SPL AE + +LEGL+ A + + SDSL I ++ +
Subjt: RNSPRQV-------DNVGMRIHVDVANYDIHAGVEGYGVVIRDHSGQVKAAMQGHHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLND
Query: EIEEETSVSAILWDINSMKSKFSKIMFLHIFRKQNMIAHNLAREGLRG----HAQIFGF
EI + +I ++ F+ I F H R+ N AH LA+ G+ +A +F F
Subjt: EIEEETSVSAILWDINSMKSKFSKIMFLHIFRKQNMIAHNLAREGLRG----HAQIFGF
|
|
| A0A7J9D5S3 RNase H domain-containing protein | 1.3e-16 | 30.92 | Show/hide |
Query: CDGAWAIWNDRNNFKHNKPLPEVNEKCDWIIHYINEYQG-GIVRLILTEAGVRKRNSPRQVDNVGMRIHVDVANYDIHAGVEGYGVVIRDHSGQVKAAMQ
C W IW RN H + + + I Y+ E +G +L T A R + +++G I DVA +DI G+V+RD + +KA+
Subjt: CDGAWAIWNDRNNFKHNKPLPEVNEKCDWIIHYINEYQG-GIVRLILTEAGVRKRNSPRQVDNVGMRIHVDVANYDIHAGVEGYGVVIRDHSGQVKAAMQ
Query: GHHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLNDEIEEETSVSAILWDINSMKSKFSKIMFLHIFRKQNMIAHNLAREGLRGHAQIF
H ++SS AEA A LE +L M + +TI DS +I+ + +++ + AI+ DI S KS+F +I F R +N AHNLA++ L+ +++
Subjt: GHHQSLSSPLCAEAKALLEGLRLADRMEVRDITIFSDSLSLISMLNDEIEEETSVSAILWDINSMKSKFSKIMFLHIFRKQNMIAHNLAREGLRGHAQIF
Query: GFKLFPN
PN
Subjt: GFKLFPN
|
|
