CuGenDBv2

Gene ID	Lcy05g007200
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pre-mRNA-splicing factor 18
Genome location	Chr05:6963620..6967962
RNA-Seq Expression	Lcy05g007200
Synteny	Lcy05g007200
Gene Ontology terms	GO:0000350 - generation of catalytic spliceosome for second transesterification step (biological process) GO:0005682 - U5 snRNP (cellular component) GO:0046540 - U4/U6 x U5 tri-snRNP complex (cellular component) GO:0071021 - U2-type post-spliceosomal complex (cellular component)
InterPro domains	IPR004098 - Prp18 IPR014906 - Pre-mRNA processing factor 4 (PRP4)-like IPR036285 - PRP4-like superfamily IPR039979 - Pre-mRNA-splicing factor 18

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0064068.1 pre-mRNA-splicing factor 18 [Cucumis melo var. makuwa]

2.4e-215

96.9

Show/hide

Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQK IQQLREKEKRELEAKALRQST SA  AEA STSSKSNPLASASTTSSS AI+ST TTSKSLTDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES
        IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEG+GGGADEES
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES

Query:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM
        ADGGSSGVETDKDL RMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK+LPDDIRQAL+VVVECCM
Subjt:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKPGSDERLRIMPAPEDS
        GGGK GSDERLRIMPAPEDS
Subjt:  GGGKPGSDERLRIMPAPEDS

XP_004146980.1 pre-mRNA-splicing factor 18 [Cucumis sativus]

7.1e-215

96.67

Show/hide

Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+ IQQLREKEKRELEAKALRQSTTSA  AEA STSSKSNPLASASTTSSS A NST TTSKSLTDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES
        IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEG+GGGADEES
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES

Query:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM
        ADGGSSGVETDKDL RMKANFDELCEEDKILVFFKRLLNEW QELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK+LPDDIRQAL+VVVECCM
Subjt:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKPGSDERLRIMPAPEDS
        GGGK GSDERLRIMPAPEDS
Subjt:  GGGKPGSDERLRIMPAPEDS

XP_008451349.1 PREDICTED: pre-mRNA-splicing factor 18 [Cucumis melo]

9.2e-215

96.67

Show/hide

Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQK IQQLREKEKRELEAKALRQST SA  AEA STSSKSNPLASASTTSSS AI+ST TTSKSLTDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES
        IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEG+GGG DEES
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES

Query:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM
        ADGGSSGVETDKDL RMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK+LPDDIRQAL+VVVECCM
Subjt:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKPGSDERLRIMPAPEDS
        GGGK GSDERLRIMPAPEDS
Subjt:  GGGKPGSDERLRIMPAPEDS

XP_023549183.1 pre-mRNA-splicing factor 18-like [Cucurbita pepo subsp. pepo]

1.0e-213

95.95

Show/hide

Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQK IQQLREKEKRELEAKALRQS+T++  AEATS SSKSN LASASTTSSSAAINSTATTSKSLTDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES
        IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEG+GGGADE+S
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES

Query:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM
        ADGGSSGV+ DKDL R+KANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK+LPDDIRQAL+VVVECCM
Subjt:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKPGSDERLRIMPAPEDS
        GGGK GSDERLRIMPAPEDS
Subjt:  GGGKPGSDERLRIMPAPEDS

XP_038897671.1 pre-mRNA-splicing factor 18 [Benincasa hispida]

7.5e-217

97.14

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Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQK IQQLREKEKRELEAKALRQSTTSAA AEATSTSSKSNPLASASTTSSS AINSTATTSKSLTDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES
        IDNLVLPRQEVIRRLRFLKQPIT+FGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEG+GGGADEES
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES

Query:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM
        ADGGSSGV+ DKDL RMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK+LPDDIRQAL+VVVECCM
Subjt:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKPGSDERLRIMPAPEDS
        GGGKPGSDERLRIMPA +DS
Subjt:  GGGKPGSDERLRIMPAPEDS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K7C9 Pre-mRNA-splicing factor 18

3.4e-215

96.67

Show/hide

Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+ IQQLREKEKRELEAKALRQSTTSA  AEA STSSKSNPLASASTTSSS A NST TTSKSLTDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES
        IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEG+GGGADEES
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES

Query:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM
        ADGGSSGVETDKDL RMKANFDELCEEDKILVFFKRLLNEW QELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK+LPDDIRQAL+VVVECCM
Subjt:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKPGSDERLRIMPAPEDS
        GGGK GSDERLRIMPAPEDS
Subjt:  GGGKPGSDERLRIMPAPEDS

A0A1S3BS26 Pre-mRNA-splicing factor 18

4.5e-215

96.67

Show/hide

Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQK IQQLREKEKRELEAKALRQST SA  AEA STSSKSNPLASASTTSSS AI+ST TTSKSLTDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES
        IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEG+GGG DEES
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES

Query:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM
        ADGGSSGVETDKDL RMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK+LPDDIRQAL+VVVECCM
Subjt:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKPGSDERLRIMPAPEDS
        GGGK GSDERLRIMPAPEDS
Subjt:  GGGKPGSDERLRIMPAPEDS

A0A5D3DRE9 Pre-mRNA-splicing factor 18

1.2e-215

96.9

Show/hide

Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQK IQQLREKEKRELEAKALRQST SA  AEA STSSKSNPLASASTTSSS AI+ST TTSKSLTDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES
        IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEG+GGGADEES
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES

Query:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM
        ADGGSSGVETDKDL RMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK+LPDDIRQAL+VVVECCM
Subjt:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKPGSDERLRIMPAPEDS
        GGGK GSDERLRIMPAPEDS
Subjt:  GGGKPGSDERLRIMPAPEDS

A0A6J1GQ96 Pre-mRNA-splicing factor 18

1.9e-213

95.95

Show/hide

Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQK IQQLREKEKRELEAKALRQS+TS+  AEATS SSKSN LASASTTSSSAAINSTATTSKSLTDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES
        IDNLVL RQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEG+GGGADE+S
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES

Query:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM
        ADGGSSGV+ DKDL R+KANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK+LPDDIRQAL+VVVECCM
Subjt:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKPGSDERLRIMPAPEDS
        GGGK GSDERLRIMPAPEDS
Subjt:  GGGKPGSDERLRIMPAPEDS

A0A6J1JZG6 Pre-mRNA-splicing factor 18

5.5e-213

95.48

Show/hide

Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN
        MDLLKQELLKKRQALATETGGKRVFKRSEIEQK IQQLREKEKRELEAKALRQS+TS+  AEATS SSKSN LASAS TSSSAAINSTATTSKS+TDEQN
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQN

Query:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES
        IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEG+GGGADE+S
Subjt:  IDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEES

Query:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM
        ADGGSSG + DKDL R+KANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK+LPDDIRQAL+VVVECCM
Subjt:  ADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCM

Query:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
        KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS
Subjt:  KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVS

Query:  GGGKPGSDERLRIMPAPEDS
        GGGK GSDERLRIMPAPEDS
Subjt:  GGGKPGSDERLRIMPAPEDS

SwissProt top hits

e value

%identity

Alignment

Q2HJ41 Pre-mRNA-splicing factor 18

9.4e-45

34.63

Show/hide

Query:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTD
        MD+LK E+L+KRQ +         K+ FKRSE+ +K  +   E+   +++ K            E     + SNP+                        
Subjt:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTD

Query:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGAD
              + L RQEVIRRLR   +PI LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    ++          G  E GE    +
Subjt:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGAD

Query:  EESADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVE
        +      ++ +E  + L       D+  + D I  F K LL  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Subjt:  EESADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVE

Query:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL
          ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Subjt:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL

Q5RE03 Pre-mRNA-splicing factor 18

4.2e-45

34.88

Show/hide

Query:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTD
        MD+LK E+L+KRQ +         K+ FKRSE+ +K  +   E+    ++ K            E     + SNP+                        
Subjt:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTD

Query:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGAD
              + L RQEVIRRLR   +PI LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    I+          G  E GE    +
Subjt:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGAD

Query:  EESADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVE
        +      ++ +E  + L       D+  + D I  F K LL  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Subjt:  EESADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVE

Query:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL
          ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Subjt:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL

Q8BM39 Pre-mRNA-splicing factor 18

8.5e-46

34.88

Show/hide

Query:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTD
        MD+LK E+L+KRQ +         K+ FKRSE+ +K  +   E+   +++ K   Q   ++           SNP+                        
Subjt:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTD

Query:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGAD
              + L RQEVIRRLR   +PI LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    I+          G  E GE    +
Subjt:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGAD

Query:  EESADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVE
        +      ++ +E  + L       D+  + D I  F K LL  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Subjt:  EESADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVE

Query:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL
          ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Subjt:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL

Q99633 Pre-mRNA-splicing factor 18

3.2e-45

34.88

Show/hide

Query:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTD
        MD+LK E+L+KRQ +         K+ FKRSE+ +K  +   E+   +++ K            E     + SNP+                        
Subjt:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTD

Query:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGAD
              + L RQEVIRRLR   +PI LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    I+          G  E GE    +
Subjt:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGAD

Query:  EESADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVE
        +      ++ +E  + L       D+  + D I  F K LL  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Subjt:  EESADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVE

Query:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL
          ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Subjt:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL

Q9JKB8 Pre-mRNA-splicing factor 18

2.5e-45

34.63

Show/hide

Query:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTD
        MD+LK E+L+KRQ +         K+ FKRSE+ +K  +   E+   +++ K   Q   ++           SNP+                        
Subjt:  MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTD

Query:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGAD
              + L RQEVIRRLR   +P+ LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    I+          G  E GE    +
Subjt:  EQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGAD

Query:  EESADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVE
        +      ++ +E  + L       D+  + D I  F K LL  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Subjt:  EESADGGSSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVE

Query:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL
          ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Subjt:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL

Arabidopsis top hits

e value

%identity

Alignment

AT1G03140.1 splicing factor Prp18 family protein

9.0e-152

69.1

Show/hide

Query:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSK--SNPLASASTTSSSAAINSTATTSKSLTDE
        MDLL++E+LKKR++LA E+GGK+ FKRSEIEQK IQ+LRE+E+RE E KA R++  +A+  +  S+ S   S+  A+++++ SSA+  +    SK+LTDE
Subjt:  MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSK--SNPLASASTTSSSAAINSTATTSKSLTDE

Query:  QNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADE
            NL+LPRQEVIRRLRFLKQP+TLFGEDD +RLDRLK+VLK GLFEVDSD+TEGQTNDFLRDIAEL+KRQK+G++ +RKR+ +++   +EG+ G   E
Subjt:  QNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADE

Query:  ESADGG-SSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVE
        +   GG SS V+ DKD+ R+KANF++LC+EDKILVF+K+LL EW QELD M   E+RTAKGK MVATFKQCARYL PLF  CRKK LP DIRQAL+V+V 
Subjt:  ESADGG-SSGVETDKDLTRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVE

Query:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEE
         C+KRDYLAAMD YIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS+KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEE
Subjt:  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEE

Query:  RVSGGGKPG-SDERLRIMPAPEDS
        R  GG +   S+ERLR+MP+  +S
Subjt:  RVSGGGKPG-SDERLRIMPAPEDS

AT1G54590.1 INVOLVED IN: RNA splicing

2.2e-89

62.76

Show/hide

Query:  RLDRLKFVLKAGLF-EVDSDLTEGQTNDFLRDIAELRKRQK-TGILSERKRQKKEDGAGEEGEGGGADEESADGGSSGVETDKDLTRM-KANFDELCEED
        RLDRLK+VLK GLF EVD+D+T+G+TNDFLRDI EL+KR++ +G++++RKR+   D      E  GA++E             DL  + +ANF++LC+ED
Subjt:  RLDRLKFVLKAGLF-EVDSDLTEGQTNDFLRDIAELRKRQK-TGILSERKRQKKEDGAGEEGEGGGADEESADGGSSGVETDKDLTRM-KANFDELCEED

Query:  KILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCMKRDYLAAMDQYIKMAIGNAPWPIGVTMV
        KILVF K+LL EW QEL+ M   E+RTA GK M+ATF QCARYL PLF  CR K LP DIRQ L+V+V C +KRDYL A  Q+IK+AIGNAPWPIGVTMV
Subjt:  KILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCMKRDYLAAMDQYIKMAIGNAPWPIGVTMV

Query:  GIHERSAREKIYT-NSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKPG-SDERLRIMPA
        GIHERSAREKI T +SVAHIMN+ETTRKYLQS+KRLMTFCQRRY  +PSK++EFNSLANGS+L SLLAEER     +   S+ERL +MP+
Subjt:  GIHERSAREKIYT-NSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKPG-SDERLRIMPA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATCTCCTCAAGCAAGAACTTCTCAAGAAACGTCAAGCCCTAGCCACCGAAACCGGCGGCAAGCGCGTCTTCAAGCGATCCGAGATCGAACAGAAGCACATCCAGCA
GCTACGCGAGAAAGAGAAGCGTGAATTGGAGGCCAAAGCTCTCCGCCAATCCACCACCTCCGCAGCCACCGCCGAGGCCACCTCCACATCCTCCAAATCCAACCCATTAG
CCTCGGCCTCCACCACTTCCTCCTCCGCTGCAATCAACTCCACCGCCACCACTTCGAAATCCCTAACGGACGAGCAGAACATCGACAATCTCGTCCTTCCCAGACAGGAA
GTGATCCGAAGGCTTCGGTTTCTGAAACAGCCCATCACGCTTTTCGGGGAAGATGATGATGCTCGGCTTGACCGTTTGAAGTTTGTGCTGAAAGCGGGGCTTTTCGAGGT
GGATAGTGATTTGACCGAGGGGCAAACAAACGATTTTCTTCGGGATATTGCGGAGTTGAGGAAGCGGCAAAAGACGGGGATTTTGAGCGAGAGGAAGAGGCAGAAGAAGG
AGGATGGTGCTGGGGAAGAGGGAGAAGGGGGTGGGGCTGATGAAGAAAGTGCTGATGGGGGATCGAGTGGGGTCGAAACTGACAAAGATTTGACGAGAATGAAAGCGAAT
TTTGACGAGTTATGTGAGGAAGATAAGATATTGGTGTTTTTTAAGAGGTTATTGAATGAGTGGAACCAGGAGTTGGATGAAATGCCTGAAGCAGAAAAGAGGACGGCCAA
AGGGAAGTCTATGGTAGCAACATTCAAGCAGTGTGCTCGTTATTTGCATCCTCTGTTCAAGTTTTGTAGGAAGAAGATTCTTCCCGACGATATTCGACAAGCATTGGTGG
TAGTTGTCGAATGCTGCATGAAGCGAGACTATCTAGCTGCCATGGATCAATACATTAAGATGGCTATTGGAAATGCCCCCTGGCCTATTGGTGTCACTATGGTTGGTATT
CACGAACGTTCAGCTCGTGAGAAGATTTACACCAACAGTGTGGCCCATATCATGAATGATGAAACAACAAGGAAGTACTTGCAATCGATCAAGAGATTGATGACATTTTG
TCAACGGCGCTATCCAACAATGCCATCCAAGGCAGTAGAATTTAACAGCTTGGCAAATGGCAGCGACCTGCAGTCCCTGCTAGCAGAAGAGAGAGTTTCTGGAGGAGGTA
AGCCAGGTTCTGATGAAAGGCTGCGAATCATGCCCGCCCCAGAAGATAGCTAG

mRNA sequence

Show/hide mRNA sequence

ATCTCAATTAACGGCAGTGTTGTCTGTTTGGATAGACGCTGCTTTCCCCCTTCTCTGAAAGCAAGCCCTAACAAGATTCCGGCGAAGAGAGAACCAGAACAGAGCCATGG
ATCTCCTCAAGCAAGAACTTCTCAAGAAACGTCAAGCCCTAGCCACCGAAACCGGCGGCAAGCGCGTCTTCAAGCGATCCGAGATCGAACAGAAGCACATCCAGCAGCTA
CGCGAGAAAGAGAAGCGTGAATTGGAGGCCAAAGCTCTCCGCCAATCCACCACCTCCGCAGCCACCGCCGAGGCCACCTCCACATCCTCCAAATCCAACCCATTAGCCTC
GGCCTCCACCACTTCCTCCTCCGCTGCAATCAACTCCACCGCCACCACTTCGAAATCCCTAACGGACGAGCAGAACATCGACAATCTCGTCCTTCCCAGACAGGAAGTGA
TCCGAAGGCTTCGGTTTCTGAAACAGCCCATCACGCTTTTCGGGGAAGATGATGATGCTCGGCTTGACCGTTTGAAGTTTGTGCTGAAAGCGGGGCTTTTCGAGGTGGAT
AGTGATTTGACCGAGGGGCAAACAAACGATTTTCTTCGGGATATTGCGGAGTTGAGGAAGCGGCAAAAGACGGGGATTTTGAGCGAGAGGAAGAGGCAGAAGAAGGAGGA
TGGTGCTGGGGAAGAGGGAGAAGGGGGTGGGGCTGATGAAGAAAGTGCTGATGGGGGATCGAGTGGGGTCGAAACTGACAAAGATTTGACGAGAATGAAAGCGAATTTTG
ACGAGTTATGTGAGGAAGATAAGATATTGGTGTTTTTTAAGAGGTTATTGAATGAGTGGAACCAGGAGTTGGATGAAATGCCTGAAGCAGAAAAGAGGACGGCCAAAGGG
AAGTCTATGGTAGCAACATTCAAGCAGTGTGCTCGTTATTTGCATCCTCTGTTCAAGTTTTGTAGGAAGAAGATTCTTCCCGACGATATTCGACAAGCATTGGTGGTAGT
TGTCGAATGCTGCATGAAGCGAGACTATCTAGCTGCCATGGATCAATACATTAAGATGGCTATTGGAAATGCCCCCTGGCCTATTGGTGTCACTATGGTTGGTATTCACG
AACGTTCAGCTCGTGAGAAGATTTACACCAACAGTGTGGCCCATATCATGAATGATGAAACAACAAGGAAGTACTTGCAATCGATCAAGAGATTGATGACATTTTGTCAA
CGGCGCTATCCAACAATGCCATCCAAGGCAGTAGAATTTAACAGCTTGGCAAATGGCAGCGACCTGCAGTCCCTGCTAGCAGAAGAGAGAGTTTCTGGAGGAGGTAAGCC
AGGTTCTGATGAAAGGCTGCGAATCATGCCCGCCCCAGAAGATAGCTAGCTAGTAAGAATATCCCTCCTGGATGCTACTCTCTAAGATCTTTATGATATGTAATCTAAAG
CTCTTCACCATAGTTCGATAGTCAGTCAGTCAAATTCTGAGTACTGTTTGAGATTGAAGTCTGTCAATGTCAAATACTTGCTGTGGATCAGAAGATTGATAACTTTTCAT
GAGCACTAGCCAACAACGTTGTCCTAGGCAGTAGAATTTAACAGCTTTGCAAACGGTAGCGACCGTGCAGCCCCTGCTAGCGGAAGCAAATCTGGACGAGGCAAGTAGTG
TGTTCCTATGAAATACTCCAAATCGCGCCCGCCCTGGAAGCTAGCTACCTGGTAAGAAGATTCTCTCCTGGCCACCATTCATTATGTCTCTATGATATTAAATTTGAAGT
TTCAGCACATAGTTTGGTAGGCAGTAAGTCATTGTCTGAGTACTGATTGAGATTGAAGTTTCTATTAACATTTTTCAATATGAAACAGTGCTTCAGAACCTAATATATGG
TTACTTTTTGCCAAGGTAGGTAATTGATTGCAATTTCAAGCTTATAGAGTAGGATGACAAGTGTAGTAGGAATAAAGAAAGCCAATATCACAGTAGTGGATTCCCAATTG
AA

Protein sequence

Show/hide protein sequence

MDLLKQELLKKRQALATETGGKRVFKRSEIEQKHIQQLREKEKRELEAKALRQSTTSAATAEATSTSSKSNPLASASTTSSSAAINSTATTSKSLTDEQNIDNLVLPRQE
VIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEESADGGSSGVETDKDLTRMKAN
FDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALVVVVECCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGI
HERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKPGSDERLRIMPAPEDS

Lcy05g007200 (gene) of Sponge gourd (P93075) v1 genome