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Lcy05g007240 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g007240
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionMethylthioribose-1-phosphate isomerase
Genome locationChr05:7005347..7006987
RNA-Seq ExpressionLcy05g007240
SyntenyLcy05g007240
Gene Ontology termsGO:0019509 - L-methionine salvage from methylthioadenosine (biological process)
GO:0005622 - intracellular (cellular component)
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021750103.1 methylthioribose-1-phosphate isomerase-like [Chenopodium quinoa]8.4e-0571.74Show/hide
Query:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK
        EERSPKELLNSRGGL E V  SGIS    A DV+PA L+SGII EK
Subjt:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK

XP_021750206.1 methylthioribose-1-phosphate isomerase-like [Chenopodium quinoa]8.4e-0571.74Show/hide
Query:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK
        EERSPKELLNSRGGL E V  SGIS    A DV+PA L+SGII EK
Subjt:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK

XP_021756686.1 methylthioribose-1-phosphate isomerase-like isoform X2 [Chenopodium quinoa]8.4e-0571.74Show/hide
Query:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK
        EERSPKELLNSRGGL E V  SGIS    A DV+PA L+SGII EK
Subjt:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK

XP_022147606.1 methylthioribose-1-phosphate isomerase [Momordica charantia]6.4e-0569.57Show/hide
Query:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK
        EERSPKELLNSRGGL E V  SGI+    A DV+PA+L+SGII EK
Subjt:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK

XP_038880122.1 methylthioribose-1-phosphate isomerase [Benincasa hispida]6.4e-0569.57Show/hide
Query:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK
        EERSPKELLNSRGGL E V  SGI+    A DV+PA+L+SGII EK
Subjt:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK

TrEMBL top hitse value%identityAlignment
A0A6J1D2V9 Methylthioribose-1-phosphate isomerase3.1e-0569.57Show/hide
Query:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK
        EERSPKELLNSRGGL E V  SGI+    A DV+PA+L+SGII EK
Subjt:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK

A0A803M8P2 Uncharacterized protein4.1e-0571.74Show/hide
Query:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK
        EERSPKELLNSRGGL E V  SGIS    A DV+PA L+SGII EK
Subjt:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK

A0A803MF53 Uncharacterized protein4.1e-0571.74Show/hide
Query:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK
        EERSPKELLNSRGGL E V  SGIS    A DV+PA L+SGII EK
Subjt:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK

A0A803NCW8 Uncharacterized protein4.1e-0571.74Show/hide
Query:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK
        EERSPKELLNSRGGL E V  SGIS    A DV+PA L+SGII EK
Subjt:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK

A0A803NCW9 Uncharacterized protein4.1e-0571.74Show/hide
Query:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK
        EERSPKELLNSRGGL E V  SGIS    A DV+PA L+SGII EK
Subjt:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK

SwissProt top hitse value%identityAlignment
B6TZD1 Methylthioribose-1-phosphate isomerase1.3e-0563.04Show/hide
Query:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK
        EERSPKELLNS GGL + V  SGIS    A DV+PA L++ II EK
Subjt:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK

B9HCR2 Methylthioribose-1-phosphate isomerase4.2e-0767.39Show/hide
Query:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK
        EERSPKE+LN+RGGL E V  SGIS    A DV+PA L+SGII EK
Subjt:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK

B9RR88 Methylthioribose-1-phosphate isomerase1.1e-0771.74Show/hide
Query:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK
        EERSPKELLNSRGGL E V  SGIS    A DV+PA L+SGII EK
Subjt:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK

D7TCD0 Methylthioribose-1-phosphate isomerase1.2e-0667.39Show/hide
Query:  EERSPKELLNSRGGLEELVDTSGI----SAIDVSPAYLVSGIIAEK
        EERSPKELLNSRGGL E V  SGI     A DV+PA L++GII EK
Subjt:  EERSPKELLNSRGGLEELVDTSGI----SAIDVSPAYLVSGIIAEK

Q948X8 Methylthioribose-1-phosphate isomerase9.3e-0767.39Show/hide
Query:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK
        EERSPKELL++RGGL E V  SGIS    A DV+PA L+SGII EK
Subjt:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK

Arabidopsis top hitse value%identityAlignment
AT2G05830.1 NagB/RpiA/CoA transferase-like superfamily protein1.1e-0554.35Show/hide
Query:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK
        EERSPKEL+++ GGL E +   GIS    A D++PA L++GII EK
Subjt:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK

AT2G05830.2 NagB/RpiA/CoA transferase-like superfamily protein1.1e-0554.35Show/hide
Query:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK
        EERSPKEL+++ GGL E +   GIS    A D++PA L++GII EK
Subjt:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK

AT2G05830.3 NagB/RpiA/CoA transferase-like superfamily protein1.1e-0554.35Show/hide
Query:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK
        EERSPKEL+++ GGL E +   GIS    A D++PA L++GII EK
Subjt:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK

AT2G05830.4 NagB/RpiA/CoA transferase-like superfamily protein1.1e-0554.35Show/hide
Query:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK
        EERSPKEL+++ GGL E +   GIS    A D++PA L++GII EK
Subjt:  EERSPKELLNSRGGLEELVDTSGIS----AIDVSPAYLVSGIIAEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTTTCCTTCGCTGCAATACAGTCCATTGCCGCCAACGAAACCAAGTTCTTCTGCCGGCCGCCGCCTACGTCGCAGACGCAACAGCAGCCTTCTGCCGGCTGGTC
GATTGCCACCGTCCCTTCGAGCTCTCTCTCTCACATTGCAATCCGGCGGCTCTACATTATAAAATTGCTCTTCCGAGTCTCCGACTGCCCCCGACGCCGCCGGCCACAGC
AAGGTTCTGCCGCGGATCGAACCACCACTTCCGCCGCCCTTCGGCTCGTTCGCATGGTAGATAATACTGCCACCACCGCCACCACTGGATGTCTGGATTGGACACCACCT
CTCAAGTTTTCGTCTCACCATTGTTTCTTTCGTACTCCTCGGACTGAAGAAAGGTCTCCCAAGGAGTTGTTGAACTCTCGTGGAGGTCTCGAGGAGCTAGTGGATACATC
TGGTATCTCTGCTATTGATGTTAGTCCGGCTTATTTGGTTTCTGGAATCATAGCAGAGAAGGCTCATGCAGTCCTTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACTTTCCTTCGCTGCAATACAGTCCATTGCCGCCAACGAAACCAAGTTCTTCTGCCGGCCGCCGCCTACGTCGCAGACGCAACAGCAGCCTTCTGCCGGCTGGTC
GATTGCCACCGTCCCTTCGAGCTCTCTCTCTCACATTGCAATCCGGCGGCTCTACATTATAAAATTGCTCTTCCGAGTCTCCGACTGCCCCCGACGCCGCCGGCCACAGC
AAGGTTCTGCCGCGGATCGAACCACCACTTCCGCCGCCCTTCGGCTCGTTCGCATGGTAGATAATACTGCCACCACCGCCACCACTGGATGTCTGGATTGGACACCACCT
CTCAAGTTTTCGTCTCACCATTGTTTCTTTCGTACTCCTCGGACTGAAGAAAGGTCTCCCAAGGAGTTGTTGAACTCTCGTGGAGGTCTCGAGGAGCTAGTGGATACATC
TGGTATCTCTGCTATTGATGTTAGTCCGGCTTATTTGGTTTCTGGAATCATAGCAGAGAAGGCTCATGCAGTCCTTTATTGA
Protein sequenceShow/hide protein sequence
MSLSFAAIQSIAANETKFFCRPPPTSQTQQQPSAGWSIATVPSSSLSHIAIRRLYIIKLLFRVSDCPRRRRPQQGSAADRTTTSAALRLVRMVDNTATTATTGCLDWTPP
LKFSSHHCFFRTPRTEERSPKELLNSRGGLEELVDTSGISAIDVSPAYLVSGIIAEKAHAVLY