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Lcy05g007560 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g007560
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionreplication protein A 70 kDa DNA-binding subunit B-like
Genome locationChr05:7339130..7339506
RNA-Seq ExpressionLcy05g007560
SyntenyLcy05g007560
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51395.1 hypothetical protein Csa_008714 [Cucumis sativus]1.1e-0761.22Show/hide
Query:  ESYITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYF
        ++YIT+F A+ Y++GC+ TEYY DL+  KKEKSK +QNLV+ EDKKY F
Subjt:  ESYITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYF

XP_009776017.1 PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like [Nicotiana sylvestris]3.8e-0535.42Show/hide
Query:  YITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYFLVRMDKTGESDRARKQIVVQEICSVISMASKRHTEGEEKRAIETEENKK
        YITLF A  Y++GC+ T Y   +  +KKE+SKY++ LV ++DK++ FLV++D     DR  K ++ +E+  V  + +    + E K A   ++ K+
Subjt:  YITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYFLVRMDKTGESDRARKQIVVQEICSVISMASKRHTEGEEKRAIETEENKK

XP_016476407.1 PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like [Nicotiana tabacum]8.4e-0537.68Show/hide
Query:  YITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYFLVRMDKTGESDRARKQIVVQEI
        Y+TLF +  Y++GC+ T Y   +  + KE+SK+++ LV++ +KK+ FLV++D     DR  ++ +V+EI
Subjt:  YITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYFLVRMDKTGESDRARKQIVVQEI

XP_020262698.1 uncharacterized protein LOC109838687 [Asparagus officinalis]1.7e-0541.18Show/hide
Query:  ITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYFLVRMDKTGESDRARKQIVVQEI
        +TLF AA+ ++GC+A ++ +D+K+KK + S +FQ  V+   K Y FLV++D+  + +RA+ +I+ QEI
Subjt:  ITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYFLVRMDKTGESDRARKQIVVQEI

XP_020275837.1 uncharacterized protein LOC109850272 [Asparagus officinalis]1.7e-0541.18Show/hide
Query:  ITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYFLVRMDKTGESDRARKQIVVQEI
        +TLF AA+ ++GC+A ++ +D+K+KK + S +FQ  V+   K Y FLV++D+  + +RA+ +I+ QEI
Subjt:  ITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYFLVRMDKTGESDRARKQIVVQEI

TrEMBL top hitse value%identityAlignment
A0A0A0KP46 Uncharacterized protein5.1e-0861.22Show/hide
Query:  ESYITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYF
        ++YIT+F A+ Y++GC+ TEYY DL+  KKEKSK +QNLV+ EDKKY F
Subjt:  ESYITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYF

A0A1S4AI89 replication protein A 70 kDa DNA-binding subunit B-like4.1e-0537.68Show/hide
Query:  YITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYFLVRMDKTGESDRARKQIVVQEI
        Y+TLF +  Y++GC+ T Y   +  + KE+SK+++ LV++ +KK+ FLV++D     DR  ++ +V+EI
Subjt:  YITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYFLVRMDKTGESDRARKQIVVQEI

A0A1S4BU38 replication protein A 70 kDa DNA-binding subunit B-like1.8e-0535.42Show/hide
Query:  YITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYFLVRMDKTGESDRARKQIVVQEICSVISMASKRHTEGEEKRAIETEENKK
        YITLF A  Y++GC+ T Y   +  +KKE+SKY++ LV ++DK++ FLV++D     DR  K ++ +E+  V  + +    + E K A   ++ K+
Subjt:  YITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYFLVRMDKTGESDRARKQIVVQEICSVISMASKRHTEGEEKRAIETEENKK

A0A1S4CG46 replication protein A 70 kDa DNA-binding subunit A-like1.2e-0433.33Show/hide
Query:  YITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYFLVRMDKTGESDRARKQIVVQEICSVISMASKRHTEGEEKRAIETEENKKRAK
        Y+TLF +  Y++GC+ T Y   +  +KKE+SK+++ LV++ +K++ FLV++D     DR  ++ + +EI  V  +A+      E    I+TE   K+ K
Subjt:  YITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYFLVRMDKTGESDRARKQIVVQEICSVISMASKRHTEGEEKRAIETEENKKRAK

A0A1U7W7M5 replication protein A 70 kDa DNA-binding subunit B-like1.8e-0535.42Show/hide
Query:  YITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYFLVRMDKTGESDRARKQIVVQEICSVISMASKRHTEGEEKRAIETEENKK
        YITLF A  Y++GC+ T Y   +  +KKE+SKY++ LV ++DK++ FLV++D     DR  K ++ +E+  V  + +    + E K A   ++ K+
Subjt:  YITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYFLVRMDKTGESDRARKQIVVQEICSVISMASKRHTEGEEKRAIETEENKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGAAAGCTACATAACTCTTTTTTATGCTGCTGATTACATAGTTGGATGCAATGCAACCGAATATTACAATGATCTCAAGGATAAGAAAAAAGAAAAAAGTAAATATTTT
CAGAATTTGGTGGTAGCAGAAGATAAGAAATATTACTTCTTAGTCAGAATGGACAAAACAGGAGAGAGTGATCGTGCACGTAAACAAATAGTTGTTCAAGAAATTTGCAG
TGTCATTTCGATGGCTAGCAAAAGACACACAGAAGGTGAAGAAAAGAGAGCGATTGAAACAGAAGAGAACAAAAAACGAGCAAAA
mRNA sequenceShow/hide mRNA sequence
AGGAAAGCTACATAACTCTTTTTTATGCTGCTGATTACATAGTTGGATGCAATGCAACCGAATATTACAATGATCTCAAGGATAAGAAAAAAGAAAAAAGTAAATATTTT
CAGAATTTGGTGGTAGCAGAAGATAAGAAATATTACTTCTTAGTCAGAATGGACAAAACAGGAGAGAGTGATCGTGCACGTAAACAAATAGTTGTTCAAGAAATTTGCAG
TGTCATTTCGATGGCTAGCAAAAGACACACAGAAGGTGAAGAAAAGAGAGCGATTGAAACAGAAGAGAACAAAAAACGAGCAAAA
Protein sequenceShow/hide protein sequence
ESYITLFYAADYIVGCNATEYYNDLKDKKKEKSKYFQNLVVAEDKKYYFLVRMDKTGESDRARKQIVVQEICSVISMASKRHTEGEEKRAIETEENKKRAK