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Lcy05g007810 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g007810
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
Genome locationChr05:7676063..7677132
RNA-Seq ExpressionLcy05g007810
SyntenyLcy05g007810
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010681975.1 PREDICTED: uncharacterized protein LOC104896887 [Beta vulgaris subsp. vulgaris]6.1e-0643.06Show/hide
Query:  GFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQVCYSFTKREGNKVAHRLAKLAVEYEYTR
        GF  ++LEMD+  VY  L+  ++E S LG +++D        + V +SF KREGN VAH LAKL+ ++E  R
Subjt:  GFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQVCYSFTKREGNKVAHRLAKLAVEYEYTR

XP_010685083.1 PREDICTED: uncharacterized protein LOC104899564 [Beta vulgaris subsp. vulgaris]1.8e-0543.06Show/hide
Query:  GFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQVCYSFTKREGNKVAHRLAKLAVEYEYTR
        GF  +++EMD+  VY  L + R+E S LG +++D  +       V +SF KREGN VAH LAKL+  +E  R
Subjt:  GFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQVCYSFTKREGNKVAHRLAKLAVEYEYTR

XP_022139684.1 uncharacterized protein LOC111010533 [Momordica charantia]5.2e-0543.28Show/hide
Query:  GFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQVCYSFTKREGNKVAHRLAKLAVE
        G   ++LE DS R+Y L   ++E LS  G +I      L    QV YSFTKR GN +AH LA+ A++
Subjt:  GFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQVCYSFTKREGNKVAHRLAKLAVE

XP_042939525.1 uncharacterized protein LOC122274565 [Carya illinoinensis]6.8e-0536.84Show/hide
Query:  MGFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQVCYSFTKREGNKVAHRLAKLAVEYEYTRFQM
        +G  R++ E D++ + Q +  + E  +D G L+ND+   L    Q   +F  RE N  AH+LAKLA++YEY +  M
Subjt:  MGFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQVCYSFTKREGNKVAHRLAKLAVEYEYTRFQM

XP_042962456.1 uncharacterized protein LOC122296723 [Carya illinoinensis]5.2e-0539.73Show/hide
Query:  MGFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQVCYSFTKREGNKVAHRLAKLAVEYEYTR
        +G  RV+ E D+K + Q +  + E  +D G L+ND+   L    Q    F  RE N  AH+LAKLA++YEY +
Subjt:  MGFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQVCYSFTKREGNKVAHRLAKLAVEYEYTR

TrEMBL top hitse value%identityAlignment
A0A6J1CDQ4 uncharacterized protein LOC1110105332.5e-0543.28Show/hide
Query:  GFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQVCYSFTKREGNKVAHRLAKLAVE
        G   ++LE DS R+Y L   ++E LS  G +I      L    QV YSFTKR GN +AH LA+ A++
Subjt:  GFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQVCYSFTKREGNKVAHRLAKLAVE

A0A6P9DX22 uncharacterized protein LOC1089848678.1e-0441.79Show/hide
Query:  MGFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQVCYSFTKREGNKVAHRLAKLAV
        +GFW V LE D+K V   +  E ++ S  G +I D    L         FT REGN+VAH LAK+A+
Subjt:  MGFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQVCYSFTKREGNKVAHRLAKLAV

A0A7N2MU32 Uncharacterized protein6.2e-0447.06Show/hide
Query:  MGFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQ-VCYSFTKREGNKVAHRLAKLAV
        +GF R+ILE DS  V Q L E  E L+  G L+ D +  L   +  + YS TKR+GN VAH LAK A+
Subjt:  MGFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQ-VCYSFTKREGNKVAHRLAKLAV

A0A803KQ76 Uncharacterized protein9.6e-0537.97Show/hide
Query:  GFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQVC-YSFTKREGNKVAHRLAKLAVEYEYTRFQMRGI
        GF RV +E +  ++Y  L + R   ++LG +++D ++ L  G   C +SF KR GN+VAH LAKL   +E  R  M  +
Subjt:  GFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQVC-YSFTKREGNKVAHRLAKLAVEYEYTRFQMRGI

A0A803MT76 Uncharacterized protein8.1e-0437.97Show/hide
Query:  GFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQVC-YSFTKREGNKVAHRLAKLAVEYEYTRFQMRGI
        GF +V LE D  R+Y  L +     +  G ++ND ++ L   W  C +SF KR GN VAH+LAKL++ +   R  M  +
Subjt:  GFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQVC-YSFTKREGNKVAHRLAKLAVEYEYTRFQMRGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCTGGCGGGTGATTTTGGAAATGGACTCGAAGAGGGTTTACCAGTTGCTTAGGGAGGAGCGCGAGGAGCTGTCTGATTTGGGATGCTTGATTAATGACTCCTT
GATGGATTTGCCGGTAGGTTGGCAGGTGTGTTACAGCTTCACAAAGCGAGAAGGAAATAAGGTGGCGCATCGATTAGCAAAGCTAGCGGTAGAATATGAATATACTAGAT
TTCAAATGAGGGGTATTTTAGTCCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCTGGCGGGTGATTTTGGAAATGGACTCGAAGAGGGTTTACCAGTTGCTTAGGGAGGAGCGCGAGGAGCTGTCTGATTTGGGATGCTTGATTAATGACTCCTT
GATGGATTTGCCGGTAGGTTGGCAGGTGTGTTACAGCTTCACAAAGCGAGAAGGAAATAAGGTGGCGCATCGATTAGCAAAGCTAGCGGTAGAATATGAATATACTAGAT
TTCAAATGAGGGGTATTTTAGTCCCATAA
Protein sequenceShow/hide protein sequence
MGFWRVILEMDSKRVYQLLREEREELSDLGCLINDSLMDLPVGWQVCYSFTKREGNKVAHRLAKLAVEYEYTRFQMRGILVP