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Lcy05g007870 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g007870
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
Genome locationChr05:7867377..7868759
RNA-Seq ExpressionLcy05g007870
SyntenyLcy05g007870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ13544.1 tetratricopeptide repeat (TPR)-like superfamily protein [Actinidia rufa]8.5e-0428.99Show/hide
Query:  MLKAFKDMGSASEEKGLGFASLRIGLKLDQEGSDVYK---------------------------------------------------------------
        MLKAFKD+ +  +E+ LG   L++GLKLDQEG D  K                                                               
Subjt:  MLKAFKDMGSASEEKGLGFASLRIGLKLDQEGSDVYK---------------------------------------------------------------

Query:  -YCVIRKKWQMQRDVWRL------------LVEILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL
          C+  K+   ++ V +L               ILDKKE +  +E A AY+EIS+ YETMNEFETA +L
Subjt:  -YCVIRKKWQMQRDVWRL------------LVEILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL

KAG2308685.1 hypothetical protein Bca52824_028433 [Brassica carinata]8.5e-0440.91Show/hide
Query:  KDMGSASEEKGLGFASLRIGLKLDQEGSDVYKYCVIRKKWQMQRDVWRLLVEILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL
        ++    SE +G+ F S+   L   Q+ +D  K C+             L  EIL+KKEASS +E A AY E+++ YE+MNEFETA SL
Subjt:  KDMGSASEEKGLGFASLRIGLKLDQEGSDVYKYCVIRKKWQMQRDVWRLLVEILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL

KVH94316.1 Tetratricopeptide-like helical [Cynara cardunculus var. scolymus]8.5e-0453.85Show/hide
Query:  RKKWQMQRDVWRLLVEILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL
        ++K+Q  +   ++   ILDKKE SS +E + AY+EIS+ YETMNEFETA SL
Subjt:  RKKWQMQRDVWRLLVEILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL

XP_024981213.1 protein KINESIN LIGHT CHAIN-RELATED 1 [Cynara cardunculus var. scolymus]8.5e-0453.85Show/hide
Query:  RKKWQMQRDVWRLLVEILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL
        ++K+Q  +   ++   ILDKKE SS +E + AY+EIS+ YETMNEFETA SL
Subjt:  RKKWQMQRDVWRLLVEILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL

XP_030542592.1 protein KINESIN LIGHT CHAIN-RELATED 1 [Rhodamnia argentea]8.5e-0477.78Show/hide
Query:  ILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL
        ILDKKEASS +E A AY EIS+ YETMNEFETA SL
Subjt:  ILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL

TrEMBL top hitse value%identityAlignment
A0A118JVU4 Tetratricopeptide-like helical4.1e-0453.85Show/hide
Query:  RKKWQMQRDVWRLLVEILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL
        ++K+Q  +   ++   ILDKKE SS +E + AY+EIS+ YETMNEFETA SL
Subjt:  RKKWQMQRDVWRLLVEILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL

A0A2I4F0X6 protein KINESIN LIGHT CHAIN-RELATED 15.0e-0247.27Show/hide
Query:  CVIRKKWQMQRDVWRLLVEILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL
        C + K    +R +  + + ILDKKE ++ +E + AY EI++ YETMNEFETA SL
Subjt:  CVIRKKWQMQRDVWRLLVEILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL

A0A2I4F0X6 protein KINESIN LIGHT CHAIN-RELATED 19.2e-0476.47Show/hide
Query:  MLKAFKDMGSASEEKGLGFASLRIGLKLDQEGSD
        M+KAFK+M SA EEK LG ASL+IGLKLDQEG D
Subjt:  MLKAFKDMGSASEEKGLGFASLRIGLKLDQEGSD

A0A6J1CRC1 protein KINESIN LIGHT CHAIN-RELATED 17.0e-0472.97Show/hide
Query:  MLKAFKDMGSASEEKGLGFASLRIGLKLDQEGSDVYK
        ML AFKDM SA EE+ LG ASL+IGLKLDQEG D  K
Subjt:  MLKAFKDMGSASEEKGLGFASLRIGLKLDQEGSDVYK

A0A6J1CRC1 protein KINESIN LIGHT CHAIN-RELATED 19.2e-0475Show/hide
Query:  ILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL
        I DKKEA+S +EAA AY EIS+ YETMNEFETA SL
Subjt:  ILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL

A0A6J1CRC1 protein KINESIN LIGHT CHAIN-RELATED 17.0e-0470.27Show/hide
Query:  MLKAFKDMGSASEEKGLGFASLRIGLKLDQEGSDVYK
        MLKAFKDM SA +E+ LG ASL++GLKLDQEG D  K
Subjt:  MLKAFKDMGSASEEKGLGFASLRIGLKLDQEGSDVYK

A0A7J0GSF7 Tetratricopeptide repeat (TPR)-like superfamily protein4.1e-0428.99Show/hide
Query:  MLKAFKDMGSASEEKGLGFASLRIGLKLDQEGSDVYK---------------------------------------------------------------
        MLKAFKD+ +  +E+ LG   L++GLKLDQEG D  K                                                               
Subjt:  MLKAFKDMGSASEEKGLGFASLRIGLKLDQEGSDVYK---------------------------------------------------------------

Query:  -YCVIRKKWQMQRDVWRL------------LVEILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL
          C+  K+   ++ V +L               ILDKKE +  +E A AY+EIS+ YETMNEFETA +L
Subjt:  -YCVIRKKWQMQRDVWRL------------LVEILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G31240.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.7e-0543.86Show/hide
Query:  KYCVIRKKWQMQRDVWRLLVEILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL
        K  V ++K+   +       EIL+KKE +  +E A AY E+++ YE+MNEFETA SL
Subjt:  KYCVIRKKWQMQRDVWRLLVEILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCAAGGCGTTTAAGGACATGGGATCCGCTTCTGAGGAGAAGGGTCTTGGATTCGCTTCCTTGAGAATTGGTCTGAAACTTGACCAAGAAGGCAGTGATGTATATAA
GTATTGTGTAATCAGGAAAAAATGGCAGATGCAAAGAGATGTTTGGAGATTGCTTGTGGAAATTCTTGACAAGAAAGAGGCCAGTTCTCGAATGGAAGCTGCTGTGGCAT
ATTTGGAAATATCATTGCCGTATGAGACAATGAATGAGTTTGAAACTGCATTTTCTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCAAGGCGTTTAAGGACATGGGATCCGCTTCTGAGGAGAAGGGTCTTGGATTCGCTTCCTTGAGAATTGGTCTGAAACTTGACCAAGAAGGCAGTGATGTATATAA
GTATTGTGTAATCAGGAAAAAATGGCAGATGCAAAGAGATGTTTGGAGATTGCTTGTGGAAATTCTTGACAAGAAAGAGGCCAGTTCTCGAATGGAAGCTGCTGTGGCAT
ATTTGGAAATATCATTGCCGTATGAGACAATGAATGAGTTTGAAACTGCATTTTCTTTATGA
Protein sequenceShow/hide protein sequence
MLKAFKDMGSASEEKGLGFASLRIGLKLDQEGSDVYKYCVIRKKWQMQRDVWRLLVEILDKKEASSRMEAAVAYLEISLPYETMNEFETAFSL