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Lcy05g008120 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g008120
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionWerner Syndrome-like exonuclease
Genome locationChr05:8215593..8215940
RNA-Seq ExpressionLcy05g008120
SyntenyLcy05g008120
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147765.1 Werner Syndrome-like exonuclease, partial [Momordica charantia]1.6e-0435.71Show/hide
Query:  LVGPEEASSRLRYFLRRPTVTFVGLNLNKDARPINQTFDCFVKKKVELKRLTTPRNFRRS--NMTFHHLAEE-LGISIKKDKKIWFN--DLENVSLKQVK
        L+   E    L +FL   T TFVG+ +++DAR +   +D  V   V+L+ +   R  RR   N     LA E LG  I K K +  +  D E ++  QV 
Subjt:  LVGPEEASSRLRYFLRRPTVTFVGLNLNKDARPINQTFDCFVKKKVELKRLTTPRNFRRS--NMTFHHLAEE-LGISIKKDKKIWFN--DLENVSLKQVK

Query:  YASVHAFISASI
        YAS+ AF+S  I
Subjt:  YASVHAFISASI
TrEMBL top hitse value%identityAlignment
A0A6J1D121 Werner Syndrome-like exonuclease7.9e-0535.71Show/hide
Query:  LVGPEEASSRLRYFLRRPTVTFVGLNLNKDARPINQTFDCFVKKKVELKRLTTPRNFRRS--NMTFHHLAEE-LGISIKKDKKIWFN--DLENVSLKQVK
        L+   E    L +FL   T TFVG+ +++DAR +   +D  V   V+L+ +   R  RR   N     LA E LG  I K K +  +  D E ++  QV 
Subjt:  LVGPEEASSRLRYFLRRPTVTFVGLNLNKDARPINQTFDCFVKKKVELKRLTTPRNFRRS--NMTFHHLAEE-LGISIKKDKKIWFN--DLENVSLKQVK

Query:  YASVHAFISASI
        YAS+ AF+S  I
Subjt:  YASVHAFISASI
A0A6J1J8Y2 Werner Syndrome-like exonuclease5.1e-0432.77Show/hide
Query:  MVLVGPEEASSRLRYFLRRPTVTFVGLNLNKDARPINQTFDCFVKKKVELKRLTTPRNFRR--SNMTFHHLAEE-LGISIKKDKKIWFN--DLENVSLKQ
        M L+   E    L  FL   +++FVG+ +  DA  +N  +   V+K V+L+ L      RR   N     LA+E LG  I+K + +  +  D E ++  Q
Subjt:  MVLVGPEEASSRLRYFLRRPTVTFVGLNLNKDARPINQTFDCFVKKKVELKRLTTPRNFRR--SNMTFHHLAEE-LGISIKKDKKIWFN--DLENVSLKQ

Query:  VKYASVHAFISASIEKHRL
        +KYA   AF+S  I +H L
Subjt:  VKYASVHAFISASIEKHRL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTGGTTGGACCAGAAGAAGCATCATCTCGGCTCCGATACTTCCTAAGGCGTCCTACAGTCACGTTCGTTGGGCTGAATCTCAACAAAGACGCTCGGCCTATCAA
CCAGACATTTGATTGCTTCGTGAAGAAAAAGGTTGAATTAAAACGTCTGACGACACCTAGAAACTTCAGGAGAAGCAATATGACATTTCACCATCTTGCGGAAGAACTAG
GAATTTCAATCAAGAAGGACAAGAAGATCTGGTTCAATGACTTGGAGAACGTTAGCCTCAAACAGGTGAAATATGCATCCGTACATGCGTTTATCTCGGCTTCCATTGAG
AAGCATAGGCTTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTGGTTGGACCAGAAGAAGCATCATCTCGGCTCCGATACTTCCTAAGGCGTCCTACAGTCACGTTCGTTGGGCTGAATCTCAACAAAGACGCTCGGCCTATCAA
CCAGACATTTGATTGCTTCGTGAAGAAAAAGGTTGAATTAAAACGTCTGACGACACCTAGAAACTTCAGGAGAAGCAATATGACATTTCACCATCTTGCGGAAGAACTAG
GAATTTCAATCAAGAAGGACAAGAAGATCTGGTTCAATGACTTGGAGAACGTTAGCCTCAAACAGGTGAAATATGCATCCGTACATGCGTTTATCTCGGCTTCCATTGAG
AAGCATAGGCTTGGATGA
Protein sequenceShow/hide protein sequence
MVLVGPEEASSRLRYFLRRPTVTFVGLNLNKDARPINQTFDCFVKKKVELKRLTTPRNFRRSNMTFHHLAEELGISIKKDKKIWFNDLENVSLKQVKYASVHAFISASIE
KHRLG