; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy05g008370 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g008370
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr05:8451514..8455625
RNA-Seq ExpressionLcy05g008370
SyntenyLcy05g008370
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021809818.1 uncharacterized protein LOC110753261 [Prunus avium]4.5e-2034.91Show/hide
Query:  ITREEVRWSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMD
        I  +  +WSPP +G YK+NVDAAF  E   +G+G VVR+  G VM   +L   +  S + AE      G+  A + G    ++E+DS  V    + +E +
Subjt:  ITREEVRWSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMD

Query:  DYSDLGALVVDLRKELLGSSSVGCTFTRREGNGVAHHLARWALKEEESMVWMESVPQCVEALVSSDIVL
         ++  G L+ D+++ L     V  +F+ R  N VAH LAR AL  +  + W+E VP  ++++V+ DIV+
Subjt:  DYSDLGALVVDLRKELLGSSSVGCTFTRREGNGVAHHLARWALKEEESMVWMESVPQCVEALVSSDIVL

XP_021833932.1 uncharacterized protein LOC110773715 [Prunus avium]1.7e-1934.91Show/hide
Query:  ITREEVRWSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMD
        I  +  +WSPP +G  K+NVDAAF  E +  G+  VVR+  G +M   +L      SP+ AE      GI+ A + G   +++E DS  V    + +E +
Subjt:  ITREEVRWSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMD

Query:  DYSDLGALVVDLRKELLGSSSVGCTFTRREGNGVAHHLARWALKEEESMVWMESVPQCVEALVSSDIVL
         ++  G L+ D+++ L     V  +F+ R  N VAH LA+ AL     + W+E VP C+E +V  DIV+
Subjt:  DYSDLGALVVDLRKELLGSSSVGCTFTRREGNGVAHHLARWALKEEESMVWMESVPQCVEALVSSDIVL

XP_022135942.1 uncharacterized protein LOC111007775 [Momordica charantia]5.0e-1936.65Show/hide
Query:  WSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMDDYSDLGA
        W PP   ++KVNVDAAF++  + AGL +++RDS   V+L A     HV    +AE     +G+ LA+E GL P  +ETDSS+V    +  + +D S++G 
Subjt:  WSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMDDYSDLGA

Query:  LVVDLRKELLGSSSV--GCTFTRREGNGVAHHLARWALKEEESMVWMESVPQCVEALVSSD
        L   +R  ++ S  +  G +F  REGN  AH LAR  +  E   VW+E     +  ++++D
Subjt:  LVVDLRKELLGSSSV--GCTFTRREGNGVAHHLARWALKEEESMVWMESVPQCVEALVSSD

XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]3.9e-2439.29Show/hide
Query:  EVRWSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMDDYSD
        EV W PPD   YK+N DA+F      AGLG+++R+  G+VM  A+   ++++S +MAE    V+G++LA +IG+ P++LETDSSR+   F ++  +D S+
Subjt:  EVRWSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMDDYSD

Query:  LGALVVDLRKELLGSSSVGCTFTRREGNGVAHHLARWALKEEESMVWMESVP---------QCVEALV
         G +V+  +     S      F +REGN  AH LAR AL   E  +WME  P         +C+E LV
Subjt:  LGALVVDLRKELLGSSSVGCTFTRREGNGVAHHLARWALKEEESMVWMESVP---------QCVEALV

XP_030941863.1 uncharacterized protein LOC115966860 [Quercus lobata]5.0e-1938.1Show/hide
Query:  ITREEVRWSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMD
        I R  VRWSPP   WYK N DAAF  E   A +GVV RD AG+V          V+S +MAE     + +  A E+ LF +++E D   V    Q    +
Subjt:  ITREEVRWSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMD

Query:  DYSDLGALVVDLRKELLGSSSVGCTF--TRREGNGVAHHLARWALKEEESMVWMESVPQCVEALVSSD
          + L   ++D  K  +G    GC F   RREGN +AH LAR A+   ++ VW+E +P+ V  +  SD
Subjt:  DYSDLGALVVDLRKELLGSSSVGCTF--TRREGNGVAHHLARWALKEEESMVWMESVPQCVEALVSSD

TrEMBL top hitse value%identityAlignment
A0A6J1C467 uncharacterized protein LOC1110077752.4e-1936.65Show/hide
Query:  WSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMDDYSDLGA
        W PP   ++KVNVDAAF++  + AGL +++RDS   V+L A     HV    +AE     +G+ LA+E GL P  +ETDSS+V    +  + +D S++G 
Subjt:  WSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMDDYSDLGA

Query:  LVVDLRKELLGSSSV--GCTFTRREGNGVAHHLARWALKEEESMVWMESVPQCVEALVSSD
        L   +R  ++ S  +  G +F  REGN  AH LAR  +  E   VW+E     +  ++++D
Subjt:  LVVDLRKELLGSSSV--GCTFTRREGNGVAHHLARWALKEEESMVWMESVPQCVEALVSSD

A0A6J1CIF1 uncharacterized protein LOC1110112371.9e-2439.29Show/hide
Query:  EVRWSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMDDYSD
        EV W PPD   YK+N DA+F      AGLG+++R+  G+VM  A+   ++++S +MAE    V+G++LA +IG+ P++LETDSSR+   F ++  +D S+
Subjt:  EVRWSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMDDYSD

Query:  LGALVVDLRKELLGSSSVGCTFTRREGNGVAHHLARWALKEEESMVWMESVP---------QCVEALV
         G +V+  +     S      F +REGN  AH LAR AL   E  +WME  P         +C+E LV
Subjt:  LGALVVDLRKELLGSSSVGCTFTRREGNGVAHHLARWALKEEESMVWMESVP---------QCVEALV

A0A6J1DBJ7 uncharacterized protein LOC1110189733.2e-1936.88Show/hide
Query:  WSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMDDYSDLGA
        W PP     KVNVDAAFR+E + AG+GV++RDS G V L A  +       +  EG+   +GI LA+E G     +ETDS R+      + +DD S++G 
Subjt:  WSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMDDYSDLGA

Query:  LVVDLRKELLG-SSSVGCTFTRREGNGVAHHLARWALKEEESMVWMESVPQCVEALVSSD
        L   ++  L   +  V  +FT R GN  AH LA+ AL      +W+E  P  + ++++ D
Subjt:  LVVDLRKELLG-SSSVGCTFTRREGNGVAHHLARWALKEEESMVWMESVPQCVEALVSSD

A0A6P5S7Q3 uncharacterized protein LOC1107532612.2e-2034.91Show/hide
Query:  ITREEVRWSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMD
        I  +  +WSPP +G YK+NVDAAF  E   +G+G VVR+  G VM   +L   +  S + AE      G+  A + G    ++E+DS  V    + +E +
Subjt:  ITREEVRWSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMD

Query:  DYSDLGALVVDLRKELLGSSSVGCTFTRREGNGVAHHLARWALKEEESMVWMESVPQCVEALVSSDIVL
         ++  G L+ D+++ L     V  +F+ R  N VAH LAR AL  +  + W+E VP  ++++V+ DIV+
Subjt:  DYSDLGALVVDLRKELLGSSSVGCTFTRREGNGVAHHLARWALKEEESMVWMESVPQCVEALVSSDIVL

A0A6P5U3N2 uncharacterized protein LOC1107737158.3e-2034.91Show/hide
Query:  ITREEVRWSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMD
        I  +  +WSPP +G  K+NVDAAF  E +  G+  VVR+  G +M   +L      SP+ AE      GI+ A + G   +++E DS  V    + +E +
Subjt:  ITREEVRWSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMD

Query:  DYSDLGALVVDLRKELLGSSSVGCTFTRREGNGVAHHLARWALKEEESMVWMESVPQCVEALVSSDIVL
         ++  G L+ D+++ L     V  +F+ R  N VAH LA+ AL     + W+E VP C+E +V  DIV+
Subjt:  DYSDLGALVVDLRKELLGSSSVGCTFTRREGNGVAHHLARWALKEEESMVWMESVPQCVEALVSSDIVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein1.0e-0927.74Show/hide
Query:  REEVRWSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMDDY
        R+  +W+PP  GW K N D+ + +       G  +R+  G ++L  +   Q       AE    +  +++    GL  +  E+DS  +     N E  D+
Subjt:  REEVRWSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMDDY

Query:  SDLGALVVDLRKELLGSSSVGCTFTRREGNGVAHHLA
        S LG L+ D+R  +L        F  RE N  A  LA
Subjt:  SDLGALVVDLRKELLGSSSVGCTFTRREGNGVAHHLA

AT4G09490.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.1e-0727.07Show/hide
Query:  PDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMDDYSDLGALVV
        PD+    +  DAA++ E    G G V+R+      L      ++VR P MAE       ++ A  IG+  L + +DS ++     +E     ++   ++ 
Subjt:  PDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMDDYSDLGALVV

Query:  DLRKELLGSSSVGCTFTRREGNGVAHHLARWAL
        D+    LG + V  +F  R  N VA  LA+ +L
Subjt:  DLRKELLGSSSVGCTFTRREGNGVAHHLARWAL

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.5e-0825.62Show/hide
Query:  RWSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMDDYSDLG
        +WSPP     K N DA+       +GLG ++R+S G V+       Q   + E AE  T +  I+ +   G   ++ E D+  +      +  +    L 
Subjt:  RWSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAGFFQNEEMDDYSDLG

Query:  ALVVDLRKELLGSSSVGCTFTRREGNGVAHHLARWALKEEESMVWMESVPQCVEALVSSD
          +  ++  +    S+  +F  RE NG A  LA+ A+KE        S P  +   V++D
Subjt:  ALVVDLRKELLGSSSVGCTFTRREGNGVAHHLARWALKEEESMVWMESVPQCVEALVSSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATGGGGAGGGGACGAGTATACGTTTTGTGGGTTGTGTGGGCATAGGGGGATTACAAGGGAAGAGGTAAGATGGAGCCCCCCGGATATTGGTTGGTATAAGGTGAA
CGTTGATGCAGCCTTTCGAAGGGAAGGATGGCAGGCGGGTTTGGGGGTGGTTGTCCGAGATTCTGCTGGGCGGGTTATGTTGTTGGCGTCATTGGTGCAGCAGCATGTAC
GAAGCCCGGAGATGGCCGAAGGGTGGACAACTGTGAAGGGCATAAGACTGGCTTTGGAGATTGGTTTGTTCCCACTGGTGCTGGAGACCGACTCTAGTCGTGTGGCTGGT
TTTTTTCAGAATGAGGAAATGGATGACTACTCTGATTTAGGTGCGCTAGTGGTTGATCTGCGGAAGGAGCTTCTGGGGTCTTCCTCTGTCGGCTGTACGTTTACCCGGAG
AGAGGGAAATGGAGTGGCTCACCATTTGGCTCGTTGGGCGTTGAAAGAGGAAGAATCTATGGTGTGGATGGAATCTGTACCTCAGTGTGTGGAGGCATTGGTCTCTTCTG
ATATCGTTTTGGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATGGGGAGGGGACGAGTATACGTTTTGTGGGTTGTGTGGGCATAGGGGGATTACAAGGGAAGAGGTAAGATGGAGCCCCCCGGATATTGGTTGGTATAAGGTGAA
CGTTGATGCAGCCTTTCGAAGGGAAGGATGGCAGGCGGGTTTGGGGGTGGTTGTCCGAGATTCTGCTGGGCGGGTTATGTTGTTGGCGTCATTGGTGCAGCAGCATGTAC
GAAGCCCGGAGATGGCCGAAGGGTGGACAACTGTGAAGGGCATAAGACTGGCTTTGGAGATTGGTTTGTTCCCACTGGTGCTGGAGACCGACTCTAGTCGTGTGGCTGGT
TTTTTTCAGAATGAGGAAATGGATGACTACTCTGATTTAGGTGCGCTAGTGGTTGATCTGCGGAAGGAGCTTCTGGGGTCTTCCTCTGTCGGCTGTACGTTTACCCGGAG
AGAGGGAAATGGAGTGGCTCACCATTTGGCTCGTTGGGCGTTGAAAGAGGAAGAATCTATGGTGTGGATGGAATCTGTACCTCAGTGTGTGGAGGCATTGGTCTCTTCTG
ATATCGTTTTGGTGTAA
Protein sequenceShow/hide protein sequence
MEWGGDEYTFCGLCGHRGITREEVRWSPPDIGWYKVNVDAAFRREGWQAGLGVVVRDSAGRVMLLASLVQQHVRSPEMAEGWTTVKGIRLALEIGLFPLVLETDSSRVAG
FFQNEEMDDYSDLGALVVDLRKELLGSSSVGCTFTRREGNGVAHHLARWALKEEESMVWMESVPQCVEALVSSDIVLV