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Lcy05g008500 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g008500
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationChr05:8623834..8624975
RNA-Seq ExpressionLcy05g008500
SyntenyLcy05g008500
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033232.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]1.3e-5553.37Show/hide
Query:  MFSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGS
        MFS K   +  ++AIALRDNFQY  VKSN E+  ++C +E+C  S+ AS         W++ +  S+H+CS+DV L DH+ AT  VIK+ IK K+ + GS
Subjt:  MFSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGS

Query:  ELKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTYTAYKIDGDGRFLYFFMSLSASIAGWKYCRPIISVD--S
        EL TPKDIV +IR+EHG+ I YQ AWRAREAAL+EI GSP DS+  IP F Y+LKL  P +   YK+D DGRFLYFF++LSA+I+GW++C P+IS+D  S
Subjt:  ELKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTYTAYKIDGDGRFLYFFMSLSASIAGWKYCRPIISVD--S

Query:  LKPAQIIN
        LK  +  N
Subjt:  LKPAQIIN

KAA0051302.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]1.2e-5352.11Show/hide
Query:  MFSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGS
        MFS K   +  ++AIALRDNFQY TVKSN E+  ++C +++  WS+RAS    +    W+V +   +H+CS+DV L DH+QAT  VIK+ IK K+S+ GS
Subjt:  MFSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGS

Query:  ELKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTYTAYKIDGDGRFLYFFMSLSASIAGWKYCRPIISVD--S
        EL T KDIV FIR++HG+  SYQKAWRA EA L++IRGS  DS+  +  F Y+L+L N  +   YK+D DGRFLYFFM+L ASI GWK+ R +IS+D  S
Subjt:  ELKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTYTAYKIDGDGRFLYFFMSLSASIAGWKYCRPIISVD--S

Query:  LKPAQIINNNKYG
        LK       N+YG
Subjt:  LKPAQIINNNKYG

KAA0060121.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]1.1e-5752.73Show/hide
Query:  MFSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGS
        MFS K   +  ++AIA+RDNFQY  VKSN E+  ++C +E+C WS+RAS         W++ +  S+H+C +DV L+D++QAT  V K+ IK K+S+ G 
Subjt:  MFSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGS

Query:  ELKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTY-------TAYKIDGDGRFLYFFMSLSASIAGWKYCRPI
        EL T KDIV FIR+EHG+ ISYQKAWRA E AL++IRGSP DS+  +P F+Y+L+L NP  +         YK+D DGRFLYFFM+LSASI+GW++CRPI
Subjt:  ELKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTY-------TAYKIDGDGRFLYFFMSLSASIAGWKYCRPI

Query:  ISVD--SLKPAQIINNNKYG
        IS+D  SLK       NKYG
Subjt:  ISVD--SLKPAQIINNNKYG

XP_022134813.1 uncharacterized protein LOC111006994 [Momordica charantia]1.0e-5553.06Show/hide
Query:  FSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGSE
        F GK NLQN LR++A+R NF +RTVKSN E+  V C+  +C W + AS++GD  SE WIVKK + +H+CSL++ LNDH+QAT  VIKE IK +++  G++
Subjt:  FSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGSE

Query:  LKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTYTAYKIDGDGRFLYFFMSLSASIAGWKYCRPIISVD
        L + KD +S +  E  I I+YQKA  ARE A+ EIRGSP  S++ IP F +M+K KNP +   +K D +GRF Y FM+ S+SI+GWKYC P+ISVD
Subjt:  LKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTYTAYKIDGDGRFLYFFMSLSASIAGWKYCRPIISVD

XP_022155207.1 uncharacterized protein LOC111022347 [Momordica charantia]4.6e-5651.04Show/hide
Query:  FSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGSE
        F GK NLQN LR++A+RDNFQ+RT+KSN ++  V+  +++C W + AS++GD  SE WIVKK + +H+CSL++ LNDH+QAT  VIKE IK + ++ G++
Subjt:  FSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGSE

Query:  LKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTYTAYKIDGDGRFLYFFMSLSASIAGWKYCRPI
        L + KD++S +R   GI I+YQKAWR R++A+ EI+GSP +S++ +P+F +M+K+KNP +   +K+D  GRF Y FM+LS+SI G++YCRP+
Subjt:  LKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTYTAYKIDGDGRFLYFFMSLSASIAGWKYCRPI

TrEMBL top hitse value%identityAlignment
A0A5A7U620 Protein FAR-RED ELONGATED HYPOCOTYL 3-like6.0e-5452.11Show/hide
Query:  MFSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGS
        MFS K   +  ++AIALRDNFQY TVKSN E+  ++C +++  WS+RAS    +    W+V +   +H+CS+DV L DH+QAT  VIK+ IK K+S+ GS
Subjt:  MFSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGS

Query:  ELKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTYTAYKIDGDGRFLYFFMSLSASIAGWKYCRPIISVD--S
        EL T KDIV FIR++HG+  SYQKAWRA EA L++IRGS  DS+  +  F Y+L+L N  +   YK+D DGRFLYFFM+L ASI GWK+ R +IS+D  S
Subjt:  ELKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTYTAYKIDGDGRFLYFFMSLSASIAGWKYCRPIISVD--S

Query:  LKPAQIINNNKYG
        LK       N+YG
Subjt:  LKPAQIINNNKYG

A0A5A7V2Y2 Protein FAR-RED ELONGATED HYPOCOTYL 3-like5.2e-5852.73Show/hide
Query:  MFSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGS
        MFS K   +  ++AIA+RDNFQY  VKSN E+  ++C +E+C WS+RAS         W++ +  S+H+C +DV L+D++QAT  V K+ IK K+S+ G 
Subjt:  MFSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGS

Query:  ELKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTY-------TAYKIDGDGRFLYFFMSLSASIAGWKYCRPI
        EL T KDIV FIR+EHG+ ISYQKAWRA E AL++IRGSP DS+  +P F+Y+L+L NP  +         YK+D DGRFLYFFM+LSASI+GW++CRPI
Subjt:  ELKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTY-------TAYKIDGDGRFLYFFMSLSASIAGWKYCRPI

Query:  ISVD--SLKPAQIINNNKYG
        IS+D  SLK       NKYG
Subjt:  ISVD--SLKPAQIINNNKYG

A0A5D3BGB6 Protein FAR-RED ELONGATED HYPOCOTYL 3-like6.4e-5653.37Show/hide
Query:  MFSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGS
        MFS K   +  ++AIALRDNFQY  VKSN E+  ++C +E+C  S+ AS         W++ +  S+H+CS+DV L DH+ AT  VIK+ IK K+ + GS
Subjt:  MFSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGS

Query:  ELKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTYTAYKIDGDGRFLYFFMSLSASIAGWKYCRPIISVD--S
        EL TPKDIV +IR+EHG+ I YQ AWRAREAAL+EI GSP DS+  IP F Y+LKL  P +   YK+D DGRFLYFF++LSA+I+GW++C P+IS+D  S
Subjt:  ELKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTYTAYKIDGDGRFLYFFMSLSASIAGWKYCRPIISVD--S

Query:  LKPAQIIN
        LK  +  N
Subjt:  LKPAQIIN

A0A6J1C328 uncharacterized protein LOC1110069944.9e-5653.06Show/hide
Query:  FSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGSE
        F GK NLQN LR++A+R NF +RTVKSN E+  V C+  +C W + AS++GD  SE WIVKK + +H+CSL++ LNDH+QAT  VIKE IK +++  G++
Subjt:  FSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGSE

Query:  LKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTYTAYKIDGDGRFLYFFMSLSASIAGWKYCRPIISVD
        L + KD +S +  E  I I+YQKA  ARE A+ EIRGSP  S++ IP F +M+K KNP +   +K D +GRF Y FM+ S+SI+GWKYC P+ISVD
Subjt:  LKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTYTAYKIDGDGRFLYFFMSLSASIAGWKYCRPIISVD

A0A6J1DNQ8 uncharacterized protein LOC1110223472.2e-5651.04Show/hide
Query:  FSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGSE
        F GK NLQN LR++A+RDNFQ+RT+KSN ++  V+  +++C W + AS++GD  SE WIVKK + +H+CSL++ LNDH+QAT  VIKE IK + ++ G++
Subjt:  FSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGSE

Query:  LKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTYTAYKIDGDGRFLYFFMSLSASIAGWKYCRPI
        L + KD++S +R   GI I+YQKAWR R++A+ EI+GSP +S++ +P+F +M+K+KNP +   +K+D  GRF Y FM+LS+SI G++YCRP+
Subjt:  LKTPKDIVSFIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTYTAYKIDGDGRFLYFFMSLSASIAGWKYCRPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAGTGGCAAGATTAATTTACAGAATGTTTTGCGTGCTATTGCCTTGAGAGACAATTTTCAGTATAGGACTGTAAAATCCAACAATGAGTTGTGGTCTGTTAAATG
TGTCGTTGAGGATTGCAATTGGTCTATTCGTGCCAGTCGATATGGCGATTTTAAAAGTGAAACATGGATTGTGAAGAAGATCATTAGTGATCATTCGTGCTCTCTTGATG
TCGCATTGAATGATCATAAACAAGCAACATCGTATGTCATTAAAGAGTGTATTAAGAGGAAGATGAGCATCACTGGAAGCGAATTGAAAACACCTAAAGATATTGTTTCG
TTCATTCGTTCTGAACATGGCATCCACATAAGTTATCAAAAAGCGTGGCGTGCTAGAGAAGCGGCTCTAAATGAAATCCGAGGCTCACCTGCAGACTCGTTCTCTTCAAT
CCCAGCATTCTCTTACATGCTGAAGTTAAAAAACCCAAGTACCTACACAGCATACAAGATAGATGGTGATGGTCGTTTCCTGTATTTTTTCATGTCCCTTTCTGCTTCTA
TTGCTGGATGGAAATATTGTCGGCCAATCATATCTGTTGATTCTTTGAAACCTGCACAAATAATTAATAATAATAAGTATGGTGTTATGTATAAATCATCTATAATATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTAGTGGCAAGATTAATTTACAGAATGTTTTGCGTGCTATTGCCTTGAGAGACAATTTTCAGTATAGGACTGTAAAATCCAACAATGAGTTGTGGTCTGTTAAATG
TGTCGTTGAGGATTGCAATTGGTCTATTCGTGCCAGTCGATATGGCGATTTTAAAAGTGAAACATGGATTGTGAAGAAGATCATTAGTGATCATTCGTGCTCTCTTGATG
TCGCATTGAATGATCATAAACAAGCAACATCGTATGTCATTAAAGAGTGTATTAAGAGGAAGATGAGCATCACTGGAAGCGAATTGAAAACACCTAAAGATATTGTTTCG
TTCATTCGTTCTGAACATGGCATCCACATAAGTTATCAAAAAGCGTGGCGTGCTAGAGAAGCGGCTCTAAATGAAATCCGAGGCTCACCTGCAGACTCGTTCTCTTCAAT
CCCAGCATTCTCTTACATGCTGAAGTTAAAAAACCCAAGTACCTACACAGCATACAAGATAGATGGTGATGGTCGTTTCCTGTATTTTTTCATGTCCCTTTCTGCTTCTA
TTGCTGGATGGAAATATTGTCGGCCAATCATATCTGTTGATTCTTTGAAACCTGCACAAATAATTAATAATAATAAGTATGGTGTTATGTATAAATCATCTATAATATAG
Protein sequenceShow/hide protein sequence
MFSGKINLQNVLRAIALRDNFQYRTVKSNNELWSVKCVVEDCNWSIRASRYGDFKSETWIVKKIISDHSCSLDVALNDHKQATSYVIKECIKRKMSITGSELKTPKDIVS
FIRSEHGIHISYQKAWRAREAALNEIRGSPADSFSSIPAFSYMLKLKNPSTYTAYKIDGDGRFLYFFMSLSASIAGWKYCRPIISVDSLKPAQIINNNKYGVMYKSSII