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Lcy05g009140 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g009140
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationChr05:9373894..9374879
RNA-Seq ExpressionLcy05g009140
SyntenyLcy05g009140
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144452.1 RING-H2 finger protein ATL3 [Cucumis sativus]2.8e-2168.89Show/hide
Query:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
        MEDEYKL QHS DSV+I+ P M+I+TAILVF L+LVF +LL L+     A  LWSRIEDPT LP+ETRR RRR+FEFSA HDPNS RGL+
Subjt:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
XP_008460362.1 PREDICTED: RING-H2 finger protein ATL3-like [Cucumis melo]3.6e-2170Show/hide
Query:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
        MEDEYKL QHS DSV I+ P M+I+TAILVF LVLVF +LL L+     A  LWSRIEDPT LP+ETRR RRR+FEFSA HDPNS RGL+
Subjt:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
XP_022955893.1 RING-H2 finger protein ATL3-like [Cucurbita moschata]1.4e-2070Show/hide
Query:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
        MED+YKL QHS DSV I+ P M+IVTAILVFLLVLVF +LL L+     A  LWSRIEDP+ LP+ETRR RRR+FEFSA  DPNSGRGL+
Subjt:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
XP_022980687.1 RING-H2 finger protein ATL60-like [Cucurbita maxima]4.7e-2171.11Show/hide
Query:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
        MED+YKL QHS DSV+I+ P M+IVTAILVFLLVLVF +LL L+     A  LWSRIEDPT LP+ETRR RRR+FEFSA  DPNSGRGL+
Subjt:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
XP_023527880.1 RING-H2 finger protein ATL3-like [Cucurbita pepo subsp. pepo]1.6e-2171.11Show/hide
Query:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
        MED+YKL QHS DSV I+ P M+IVTAILVFLLVLVF +LL L+     A  LWSRIEDP+ LP+ETRR RRR+FEFSA HDPNSGRGL+
Subjt:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
TrEMBL top hitse value%identityAlignment
A0A0A0L962 RING-type E3 ubiquitin transferase1.3e-2168.89Show/hide
Query:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
        MEDEYKL QHS DSV+I+ P M+I+TAILVF L+LVF +LL L+     A  LWSRIEDPT LP+ETRR RRR+FEFSA HDPNS RGL+
Subjt:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
A0A1S3CCE4 RING-type E3 ubiquitin transferase1.8e-2170Show/hide
Query:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
        MEDEYKL QHS DSV I+ P M+I+TAILVF LVLVF +LL L+     A  LWSRIEDPT LP+ETRR RRR+FEFSA HDPNS RGL+
Subjt:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
A0A5A7UJD5 RING-type E3 ubiquitin transferase1.8e-2170Show/hide
Query:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
        MEDEYKL QHS DSV I+ P M+I+TAILVF LVLVF +LL L+     A  LWSRIEDPT LP+ETRR RRR+FEFSA HDPNS RGL+
Subjt:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
A0A6J1GV98 RING-type E3 ubiquitin transferase6.7e-2170Show/hide
Query:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
        MED+YKL QHS DSV I+ P M+IVTAILVFLLVLVF +LL L+     A  LWSRIEDP+ LP+ETRR RRR+FEFSA  DPNSGRGL+
Subjt:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
A0A6J1IRZ5 RING-type E3 ubiquitin transferase2.3e-2171.11Show/hide
Query:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
        MED+YKL QHS DSV+I+ P M+IVTAILVFLLVLVF +LL L+     A  LWSRIEDPT LP+ETRR RRR+FEFSA  DPNSGRGL+
Subjt:  MEDEYKL-QHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACGAGTACAAGCTTCAACATTCCGACGACTCAGTGGCCATCAAGTTCCCTAGAATGATCATTGTGACCGCCATTTTAGTGTTCTTATTGGTGCTCGTGTTTTT
TGTTCTTCTTCTTCTCCATTTTAATGGTCATCGAGCTTCCATGTTATGGTCTCGCATTGAAGATCCCACCTCACTTCCTATGGAAACTCGCCGCCCTCGTCGCCGCCAAT
TCGAATTCTCCGCCTTCCACGACCCCAATTCAGGAAGAGGCTTGGAAAGCCTGCCGTTCCATCTCTTACTCTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACGAGTACAAGCTTCAACATTCCGACGACTCAGTGGCCATCAAGTTCCCTAGAATGATCATTGTGACCGCCATTTTAGTGTTCTTATTGGTGCTCGTGTTTTT
TGTTCTTCTTCTTCTCCATTTTAATGGTCATCGAGCTTCCATGTTATGGTCTCGCATTGAAGATCCCACCTCACTTCCTATGGAAACTCGCCGCCCTCGTCGCCGCCAAT
TCGAATTCTCCGCCTTCCACGACCCCAATTCAGGAAGAGGCTTGGAAAGCCTGCCGTTCCATCTCTTACTCTCGTAA
Protein sequenceShow/hide protein sequence
MEDEYKLQHSDDSVAIKFPRMIIVTAILVFLLVLVFFVLLLLHFNGHRASMLWSRIEDPTSLPMETRRPRRRQFEFSAFHDPNSGRGLESLPFHLLLS