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Lcy05g009350 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g009350
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein At4g13200, chloroplastic
Genome locationChr05:9670329..9674382
RNA-Seq ExpressionLcy05g009350
SyntenyLcy05g009350
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
InterPro domainsIPR040003 - Plastoglobular protein 18-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139667.1 uncharacterized protein At4g13200, chloroplastic [Cucumis sativus]5.4e-6679.46Show/hide
Query:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG
        MSSGVT SVS SPFSL+ T+PKITH S PS LLF SSSTPSNL+FRGISHF+PNG  RF+ARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVL 
Subjt:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG

Query:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSS-IWPTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGD
        GIGRLQAE+QKQI DFQ+EVIERAKKAK+KAARD+KEVQGP+SSS I P IEV SSPT       +S+PD DSE+VVNQDP LG+
Subjt:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSS-IWPTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGD
XP_008447268.1 PREDICTED: uncharacterized protein At4g13200, chloroplastic isoform X1 [Cucumis melo]5.0e-6477.84Show/hide
Query:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG
        MSS +T SVS SPFSL+ T+PKITH SSPS L F SSSTPSNL+FRGISHF+PNGS R +ARCSSGDGDSRT+LDAFFLGKALAEALTERIESTIGEVL 
Subjt:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG

Query:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSS-IWPTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGD
        GIG+LQAE+QKQI DFQ+EVIERAKKAK+KAAR+AKEVQ P+SSS I PTIEV+SSPT       +S+PD DSE+ VNQDPPLGD
Subjt:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSS-IWPTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGD
XP_023005089.1 uncharacterized protein At4g13200, chloroplastic-like [Cucurbita maxima]9.8e-6074.6Show/hide
Query:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG
        M+SGVTPSVSPS FS+L+++PKITH SS           PSNL+FR IS   P GSPRFV RCSSGD DSRTVL+AFFLGKALAEALTER+ESTIGEVL 
Subjt:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG

Query:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSSI---WPTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGDEE
        GIGRLQAE+QKQILDFQEEVIERAKKA++KAARDAKEVQGPISSS     PTIEV SS TTST+++Q SNP  DS T  NQDPPLGDEE
Subjt:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSSI---WPTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGDEE
XP_023514675.1 uncharacterized protein At4g13200, chloroplastic-like [Cucurbita pepo subsp. pepo]4.9e-5974.07Show/hide
Query:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG
        M+SGVTPSVSPS FS+L+++PKITH SS           PSNL+FR IS   P GSPRFV RCSSGDGDSRTVL+AFFLGKALAEALTER+ESTIGEVL 
Subjt:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG

Query:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSSI---WPTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGDEE
        GIGRLQAE+QKQILDFQEEVIERAKKA++KAARDAKEVQGPISSS     PTIEV SS T+ST+++Q SNP  DS T  NQDPPLG EE
Subjt:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSSI---WPTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGDEE
XP_038900031.1 uncharacterized protein At4g13200, chloroplastic [Benincasa hispida]9.8e-7686.1Show/hide
Query:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG
        MSSGVT SVS SPFSL+ T+PKITH SS S LLF SSSTPSNL+FR ISHF+PNGSPRF+ARCSSGDGDSRTVLDAFFLGKALAEALTERIEST+GEVL 
Subjt:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG

Query:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSSIW-PTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGDEE
        GIGRLQAE+QKQI DFQEEVIERAKKAKDKAARDAKEVQGP+SSSI  PTIEVTSSPT ST+R+Q SNPD DSETVVNQDPPLGD+E
Subjt:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSSIW-PTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGDEE
TrEMBL top hitse value%identityAlignment
A0A0A0K6Q2 Uncharacterized protein2.6e-6679.46Show/hide
Query:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG
        MSSGVT SVS SPFSL+ T+PKITH S PS LLF SSSTPSNL+FRGISHF+PNG  RF+ARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVL 
Subjt:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG

Query:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSS-IWPTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGD
        GIGRLQAE+QKQI DFQ+EVIERAKKAK+KAARD+KEVQGP+SSS I P IEV SSPT       +S+PD DSE+VVNQDP LG+
Subjt:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSS-IWPTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGD
A0A1S3BHX5 uncharacterized protein At4g13200, chloroplastic isoform X12.4e-6477.84Show/hide
Query:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG
        MSS +T SVS SPFSL+ T+PKITH SSPS L F SSSTPSNL+FRGISHF+PNGS R +ARCSSGDGDSRT+LDAFFLGKALAEALTERIESTIGEVL 
Subjt:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG

Query:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSS-IWPTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGD
        GIG+LQAE+QKQI DFQ+EVIERAKKAK+KAAR+AKEVQ P+SSS I PTIEV+SSPT       +S+PD DSE+ VNQDPPLGD
Subjt:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSS-IWPTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGD
A0A6J1GNZ1 uncharacterized protein At4g13200, chloroplastic-like4.0e-5972.73Show/hide
Query:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG
        MSSGV  SVS S FS++ T+ KITHCSSPS + F SSST SNL+      FRPNGS RF+A CSSGDGD+RTVLDAFF+GKA AE LTER+EST+GEVLG
Subjt:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG

Query:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSS-IWPTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGDEE
         IGRLQAERQ+QI+DFQEEVI+RAKKAK+KA RDAKE QGPISSS I  TIEVTSSPT S++ +Q S+P+  SETVVNQDPP GDEE
Subjt:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSS-IWPTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGDEE
A0A6J1JX27 uncharacterized protein At4g13200, chloroplastic-like5.3e-5973.8Show/hide
Query:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG
        MSSGV  SVSPS FS+L T+ KITHCSSPS + F SSST SNL+      FRPNGS RF+A CSSGDGD+RTVLDAFFLGKA AE LTER+EST+GEVL 
Subjt:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG

Query:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSSIW-PTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGDEE
         IGRLQAERQ+QI+DFQEEVIERAKKAK+KA RDAKE QGPISSSI   TIEVTSSPT S++ +Q S+ +  SETVVNQDPP GDEE
Subjt:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSSIW-PTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGDEE
A0A6J1KY61 uncharacterized protein At4g13200, chloroplastic-like4.8e-6074.6Show/hide
Query:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG
        M+SGVTPSVSPS FS+L+++PKITH SS           PSNL+FR IS   P GSPRFV RCSSGD DSRTVL+AFFLGKALAEALTER+ESTIGEVL 
Subjt:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLG

Query:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSSI---WPTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGDEE
        GIGRLQAE+QKQILDFQEEVIERAKKA++KAARDAKEVQGPISSS     PTIEV SS TTST+++Q SNP  DS T  NQDPPLGDEE
Subjt:  GIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSSI---WPTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGDEE
SwissProt top hitse value%identityAlignment
P73628 Thylakoid protein sll17691.2e-0436.11Show/hide
Query:  VLDAFFLGKALAEALTERIESTIGEVLGGIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISS
        VL AFFLG+A AE L+E++E  +   L  +G+  AE+++ +  F  EV  RA     +       V GP+S+
Subjt:  VLDAFFLGKALAEALTERIESTIGEVLGGIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISS
Q8LDV3 Uncharacterized protein At4g13200, chloroplastic5.5e-2142.16Show/hide
Query:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFR----GISHFRPNGSPRFVARCS-----SGDGDSRTVLDAFFLGKALAEALTERI
        MSS   P  SPS FSL N+  +    +SP    F   ++ SN  F      +   R + S R  + CS     SG+ ++++VLDAFFLGKALAE + ERI
Subjt:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFR----GISHFRPNGSPRFVARCS-----SGDGDSRTVLDAFFLGKALAEALTERI

Query:  ESTIGEVLGGIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSSIWPTIEVTSSPTTSTDRKQASNPDPDSETVV
        EST+GEVL  IG+ QAE+QKQ+ + QEEV+ERAKKAK++AAR+  E QG ++S     + +T +P         S    +S+T++
Subjt:  ESTIGEVLGGIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSSIWPTIEVTSSPTTSTDRKQASNPDPDSETVV
Arabidopsis top hitse value%identityAlignment
AT4G13200.1 unknown protein3.9e-2242.16Show/hide
Query:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFR----GISHFRPNGSPRFVARCS-----SGDGDSRTVLDAFFLGKALAEALTERI
        MSS   P  SPS FSL N+  +    +SP    F   ++ SN  F      +   R + S R  + CS     SG+ ++++VLDAFFLGKALAE + ERI
Subjt:  MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFR----GISHFRPNGSPRFVARCS-----SGDGDSRTVLDAFFLGKALAEALTERI

Query:  ESTIGEVLGGIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSSIWPTIEVTSSPTTSTDRKQASNPDPDSETVV
        EST+GEVL  IG+ QAE+QKQ+ + QEEV+ERAKKAK++AAR+  E QG ++S     + +T +P         S    +S+T++
Subjt:  ESTIGEVLGGIGRLQAERQKQILDFQEEVIERAKKAKDKAARDAKEVQGPISSSIWPTIEVTSSPTTSTDRKQASNPDPDSETVV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGTGGGGTTACACCTTCGGTTTCCCCATCCCCTTTCTCTCTTCTGAACACACAACCAAAAATTACCCATTGTTCATCTCCATCTCAACTTCTATTTTGTTCCTC
TTCCACTCCCTCAAATCTCAGGTTTCGAGGAATTTCACATTTTCGACCAAATGGGTCTCCCAGATTCGTTGCTCGTTGCAGCTCCGGTGATGGTGACAGCAGGACTGTTC
TAGATGCCTTTTTCTTAGGAAAAGCTTTAGCAGAAGCCTTAACTGAGCGTATCGAGTCAACAATTGGAGAGGTCTTAGGCGGGATTGGTAGGCTGCAAGCTGAACGACAA
AAACAAATTCTTGATTTCCAGGAGGAGGTGATAGAAAGAGCCAAAAAAGCCAAGGACAAAGCAGCACGTGATGCTAAAGAAGTACAAGGACCCATCTCCTCTTCAATATG
GCCTACGATCGAAGTTACTTCATCTCCAACTACTTCGACCGATCGAAAACAAGCCTCGAACCCCGACCCAGATTCCGAAACTGTTGTGAACCAGGATCCTCCTCTTGGTG
ACGAAGAGTAG
mRNA sequenceShow/hide mRNA sequence
GGGTAATCCGATTAAGGAATGAACAGCAAAACACAGTGACGGTTCCGGGTTACTGTCAATCGTCCTTACACAGCTCAAGCCACAAGCATCAATTTTTCAATTTTCCCTTT
CACCACCAAAGATCTTTCTTTATATATTAATGTTTGGTTGTCAAGAAAATGAGCGAGAAACACTGAGAAAGTGACACATTCCTTTCCATTCCCATCGCACAAAATGAGTA
GTGGGGTTACACCTTCGGTTTCCCCATCCCCTTTCTCTCTTCTGAACACACAACCAAAAATTACCCATTGTTCATCTCCATCTCAACTTCTATTTTGTTCCTCTTCCACT
CCCTCAAATCTCAGGTTTCGAGGAATTTCACATTTTCGACCAAATGGGTCTCCCAGATTCGTTGCTCGTTGCAGCTCCGGTGATGGTGACAGCAGGACTGTTCTAGATGC
CTTTTTCTTAGGAAAAGCTTTAGCAGAAGCCTTAACTGAGCGTATCGAGTCAACAATTGGAGAGGTCTTAGGCGGGATTGGTAGGCTGCAAGCTGAACGACAAAAACAAA
TTCTTGATTTCCAGGAGGAGGTGATAGAAAGAGCCAAAAAAGCCAAGGACAAAGCAGCACGTGATGCTAAAGAAGTACAAGGACCCATCTCCTCTTCAATATGGCCTACG
ATCGAAGTTACTTCATCTCCAACTACTTCGACCGATCGAAAACAAGCCTCGAACCCCGACCCAGATTCCGAAACTGTTGTGAACCAGGATCCTCCTCTTGGTGACGAAGA
GTAGTCGTCTTTATATCAATTCTCTTGGTTATAGACTTATAGTGAATGTGACCTATATATCGATGACGATGTGTTAGTCGTTCGATCTCAAAATCATATAGAAATTGTCA
TTCTTAAGGTTCCTCTTTTAGATATCTTATGAGTTTCTTGATGTCGAATATTGTCAGACCACACAATCTGTTTAGTGAGATCACTCAAGGTTTATAAGTAAGAAACCGTC
GGTATTCTTTCATCAGAAGAGACAAGTTCTTTGATTATTTGGCTGATTATCATGGTTGATCTCTCAGTTTGATTTTGATTGCTTGTTGATCCTAATCCTTCAATGGAACA
ATTTAATCTCTTTTGTTATCATACTTCCATTTTTCATTTGTAGTTCCACTTTGATATCGTTTATTATTATTATAAATTTTCTTAGTTTAAGAATATTTCGG
Protein sequenceShow/hide protein sequence
MSSGVTPSVSPSPFSLLNTQPKITHCSSPSQLLFCSSSTPSNLRFRGISHFRPNGSPRFVARCSSGDGDSRTVLDAFFLGKALAEALTERIESTIGEVLGGIGRLQAERQ
KQILDFQEEVIERAKKAKDKAARDAKEVQGPISSSIWPTIEVTSSPTTSTDRKQASNPDPDSETVVNQDPPLGDEE