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Lcy05g010430 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g010430
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNase H domain-containing protein
Genome locationChr05:11339541..11339948
RNA-Seq ExpressionLcy05g010430
SyntenyLcy05g010430
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608327.1 hypothetical protein SDJN03_01669, partial [Cucurbita argyrosperma subsp. sororia]2.7e-1453.09Show/hide
Query:  GVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTTKHCEI
        G QL M + L+ VW +++SK+VW LL D+ Q+  EIA LI+HLK L+ +H I+GFL  P+D  K TH LA HA  TKH EI
Subjt:  GVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTTKHCEI

MBA0755499.1 hypothetical protein [Gossypium gossypioides]1.1e-0432.29Show/hide
Query:  AEAQALVEGVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTTKHCEIWLEDCPL
        AEA A++ G+Q  +D   S V  E DS++V N +    +  +E  P    +K LA   H   F    R+GN   H L       +    W+ED PL
Subjt:  AEAQALVEGVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTTKHCEIWLEDCPL

XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]6.3e-0832.54Show/hide
Query:  MAAADNFWRTSCTVEWAEAQALVEGVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTT
        MA+A  +     +V+ AEA   VEG+QL     ++PV  E DS  ++NL     + L+E   ++   K   +      F    R+GNK  H LA  A   
Subjt:  MAAADNFWRTSCTVEWAEAQALVEGVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTT

Query:  KHCEIWLEDCPLWAQSSLAQDMCLTD
        +   IW+ED PL  +S L  + CL +
Subjt:  KHCEIWLEDCPLWAQSSLAQDMCLTD

XP_023901742.1 uncharacterized protein LOC112013579 [Quercus suber]1.1e-0428.23Show/hide
Query:  MAAADNFWRTSCTVEWAEAQALVEGVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTT
        +AA+      S   E +EA A+ EGV L  + ++S    E DS  +   + ++  +  E   +I+++  +A+      F    R+GNKV H+LA  A+ +
Subjt:  MAAADNFWRTSCTVEWAEAQALVEGVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTT

Query:  KHCEIWLEDCPLWAQSSLAQDMCL
           ++W   CP   +  L +D+CL
Subjt:  KHCEIWLEDCPLWAQSSLAQDMCL

XP_031091124.1 uncharacterized protein LOC115996122 [Ipomoea triloba]2.9e-0534.55Show/hide
Query:  TVEWAEAQALVEGVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTTKHCEIWLEDCPL
        TV  AEA +L E +    DS +  V  EMDS+IV+N LH +  +++    L+  +K LAS  +   F    R  N   H +A  A +      WL+  PL
Subjt:  TVEWAEAQALVEGVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTTKHCEIWLEDCPL

Query:  WAQSSLAQDM
        +  S LA D+
Subjt:  WAQSSLAQDM

TrEMBL top hitse value%identityAlignment
A0A5B7BJX6 RNase H domain-containing protein (Fragment)3.8e-0628.85Show/hide
Query:  EAQALVEGVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTTKHCEIWLEDCPLWAQSS
        E  A++E + L        +  E D++ + +LL     Y +E+  ++  ++ L+ +  +  FL   R GN V H LA        CE+WLED P W + +
Subjt:  EAQALVEGVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTTKHCEIWLEDCPLWAQSS

Query:  LAQD
        L  D
Subjt:  LAQD

A0A5C7H0P0 Uncharacterized protein9.2e-0531.31Show/hide
Query:  TVEWAEAQALVEGVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTTKHCEIWLEDCP
        +VE  EAQA +EG+ L +D  +S V  E D+  V  LL D+     E+  +I     L +  ++  ++   R+ N V H +A HA +     +W E+ P
Subjt:  TVEWAEAQALVEGVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTTKHCEIWLEDCP

A0A5C7IIT4 Uncharacterized protein1.6e-0430.77Show/hide
Query:  EAQALVEGVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTTKHCEIWLEDCPLWAQSS
        EA A++ G +L +++ L P   E DS  V NL++       EI  ++  +  + S+         PR  N V H LA  + + +   +WLEDCPL  +S 
Subjt:  EAQALVEGVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTTKHCEIWLEDCPLWAQSS

Query:  LAQD
        +  D
Subjt:  LAQD

A0A6J1CIF1 uncharacterized protein LOC1110112373.1e-0832.54Show/hide
Query:  MAAADNFWRTSCTVEWAEAQALVEGVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTT
        MA+A  +     +V+ AEA   VEG+QL     ++PV  E DS  ++NL     + L+E   ++   K   +      F    R+GNK  H LA  A   
Subjt:  MAAADNFWRTSCTVEWAEAQALVEGVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTT

Query:  KHCEIWLEDCPLWAQSSLAQDMCLTD
        +   IW+ED PL  +S L  + CL +
Subjt:  KHCEIWLEDCPLWAQSSLAQDMCLTD

A0A7J9D462 Uncharacterized protein5.4e-0532.29Show/hide
Query:  AEAQALVEGVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTTKHCEIWLEDCPL
        AEA A++ G+Q  +D   S V  E DS++V N +    +  +E  P    +K LA   H   F    R+GN   H L       +    W+ED PL
Subjt:  AEAQALVEGVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTTKHCEIWLEDCPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTGCTGACAATTTTTGGAGAACAAGTTGCACTGTAGAATGGGCAGAAGCCCAGGCCCTTGTAGAGGGTGTGCAATTAACTATGGATTCGGACTTATCTCCAGT
TTGGACAGAGATGGATTCCAAAATTGTTTGGAATTTACTTCATGATCGAGGGCAATATCTAAATGAAATAGCCCCCTTAATCCAACACCTCAAGTTTCTCGCCTCAGATC
ATCACATAAGGGGGTTCCTTCTAGCCCCAAGGGATGGCAATAAAGTAACGCACCAGTTAGCTACTCATGCACGTACAACAAAACATTGTGAAATTTGGCTAGAAGATTGT
CCTCTTTGGGCTCAAAGTAGTTTAGCTCAAGATATGTGTCTAACAGACACCCAAACCTCATCTTTTGTCTTGTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCTGCTGACAATTTTTGGAGAACAAGTTGCACTGTAGAATGGGCAGAAGCCCAGGCCCTTGTAGAGGGTGTGCAATTAACTATGGATTCGGACTTATCTCCAGT
TTGGACAGAGATGGATTCCAAAATTGTTTGGAATTTACTTCATGATCGAGGGCAATATCTAAATGAAATAGCCCCCTTAATCCAACACCTCAAGTTTCTCGCCTCAGATC
ATCACATAAGGGGGTTCCTTCTAGCCCCAAGGGATGGCAATAAAGTAACGCACCAGTTAGCTACTCATGCACGTACAACAAAACATTGTGAAATTTGGCTAGAAGATTGT
CCTCTTTGGGCTCAAAGTAGTTTAGCTCAAGATATGTGTCTAACAGACACCCAAACCTCATCTTTTGTCTTGTTGTAA
Protein sequenceShow/hide protein sequence
MAAADNFWRTSCTVEWAEAQALVEGVQLTMDSDLSPVWTEMDSKIVWNLLHDRGQYLNEIAPLIQHLKFLASDHHIRGFLLAPRDGNKVTHQLATHARTTKHCEIWLEDC
PLWAQSSLAQDMCLTDTQTSSFVLL