; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy05g010800 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g010800
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionselenoprotein F-like
Genome locationChr05:12028831..12033222
RNA-Seq ExpressionLcy05g010800
SyntenyLcy05g010800
Gene Ontology termsGO:0005788 - endoplasmic reticulum lumen (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR014912 - Selenoprotein F/M domain
IPR036249 - Thioredoxin-like superfamily
IPR038219 - Selenoprotein F/M, thioredoxin-like domain superfamily
IPR039992 - Selenoprotein F/M


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592972.1 Selenoprotein F, partial [Cucurbita argyrosperma subsp. sororia]1.2e-8088.89Show/hide
Query:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR
        MQ    VK+PAT + +AA AAAIIF+ASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC+EDSDDATSKITYSGAVLEVCMR
Subjt:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEEEKD+FPSVK+QYIFNSPPKL +LDDEGQHKESIRIDNWKREHILQFLQ+KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

XP_008460012.1 PREDICTED: 15 kDa selenoprotein [Cucumis melo]4.2e-8189.47Show/hide
Query:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR
        MQ L  V  PATA+T+  AAAAIIF++SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC+EDSDDATSKITYSGAVLEVCMR
Subjt:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEE+KDQFPSVKVQY FNSPPKL++LDDEGQHKESIRIDNWKREH LQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

XP_022960129.1 selenoprotein F-like [Cucurbita moschata]5.4e-8189.47Show/hide
Query:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR
        MQ    VKKPAT + +AA AAAIIF+ASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC+EDSDDATSKITYSGAVLEVCMR
Subjt:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEEEKD+FPSVK+QYIFNSPPKL +LDDEGQHKESIRIDNWKREHILQFLQ+KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

XP_023004122.1 selenoprotein F-like [Cucurbita maxima]7.1e-8189.47Show/hide
Query:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR
        MQ    VKKPAT + +AA  AAIIF+ASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC+EDSDDATSKITYSGAVLEVCMR
Subjt:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEEEKD+FPSVKVQYIFNSPPKL +LDDEGQHKESIRIDNWKREHILQFLQ+KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

XP_038875398.1 selenoprotein F [Benincasa hispida]4.5e-8390.64Show/hide
Query:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR
        MQ L  V+ PATA+T+A AA  +IF+ASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC+EDSDDATSKITYSGAVLEVCMR
Subjt:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKL++LDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

TrEMBL top hitse value%identityAlignment
A0A1S3CC00 15 kDa selenoprotein2.0e-8189.47Show/hide
Query:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR
        MQ L  V  PATA+T+  AAAAIIF++SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC+EDSDDATSKITYSGAVLEVCMR
Subjt:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEE+KDQFPSVKVQY FNSPPKL++LDDEGQHKESIRIDNWKREH LQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

A0A5A7T9G4 15 kDa selenoprotein7.2e-7984.07Show/hide
Query:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ-----------ELVSDCLKCCSEDSDDATSKIT
        MQ L  V  PATA+T+A AA AIIF++SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ           ELV+DCLKCC+EDSDDATSKIT
Subjt:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ-----------ELVSDCLKCCSEDSDDATSKIT

Query:  YSGAVLEVCMRKLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        YSGAVLEVCMRKLVFYPEIVGFIEE+KDQFPSVKVQY FNSPPKL++LDDEGQHKESIRIDNWKREH LQFLQEKVKRSSAI
Subjt:  YSGAVLEVCMRKLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

A0A6J1DP91 selenoprotein F1.6e-7887.72Show/hide
Query:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR
        M  L  VKKPA A T  AAA AIIF+AS+PLAWSKE L  RECEDLGFTGLALCSDC+TLAEYIKDQEL+SDCLKCC+EDSDDATSKITYSGAVLEVCMR
Subjt:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIE+EKDQFP+VKVQYIFNSPPKLV+LDDEGQ KESIRIDNWKREHILQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

A0A6J1HA08 selenoprotein F-like2.6e-8189.47Show/hide
Query:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR
        MQ    VKKPAT + +AA AAAIIF+ASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC+EDSDDATSKITYSGAVLEVCMR
Subjt:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEEEKD+FPSVK+QYIFNSPPKL +LDDEGQHKESIRIDNWKREHILQFLQ+KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

A0A6J1KPJ2 selenoprotein F-like3.4e-8189.47Show/hide
Query:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR
        MQ    VKKPAT + +AA  AAIIF+ASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC+EDSDDATSKITYSGAVLEVCMR
Subjt:  MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEEEKD+FPSVKVQYIFNSPPKL +LDDEGQHKESIRIDNWKREHILQFLQ+KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

SwissProt top hitse value%identityAlignment
A1Z623 Selenoprotein F8.9e-1835.85Show/hide
Query:  PATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEIV
        PA  L L  A A       M  A+  E  SS  C +LGF+   LC  C  L ++   Q L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++ 
Subjt:  PATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEIV

Query:  GFIEEEKDQ-FPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKR
         F+  +K + F  ++++Y+  S P L +LDD G   E + I  W  + + +FL EK++R
Subjt:  GFIEEEKDQ-FPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKR

A8YXY3 Selenoprotein F4.7e-1936.36Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLV
        + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  +K + F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLV

Query:  MLDDEGQHKESIRIDNWKREHILQFLQEKVKR
        +LDD G   E + I  W  + + +FL EK++R
Subjt:  MLDDEGQHKESIRIDNWKREHILQFLQEKVKR

O60613 Selenoprotein F8.0e-1936.36Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLV
        + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  +K + F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLV

Query:  MLDDEGQHKESIRIDNWKREHILQFLQEKVKR
        +LDD G   E + I  W  + + +FL EK++R
Subjt:  MLDDEGQHKESIRIDNWKREHILQFLQEKVKR

Q802F3 Selenoprotein F1.8e-1836.36Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLV
        +LSS  C +LGF+   LCS C  L ++  +Q L   C +CC E++     K+ Y GA+LEVC  KL  +P++  F+  +K + F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLV

Query:  MLDDEGQHKESIRIDNWKREHILQFLQEKVKR
        +LDD G   E + I  W  + + +FL EK++R
Subjt:  MLDDEGQHKESIRIDNWKREHILQFLQEKVKR

Q923V8 Selenoprotein F5.8e-1735Show/hide
Query:  KPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEI
        +PA  L L  A A   F A   L     + SS  C +LGF+   LCS C  L ++     L   C  CC E++   T K+ Y+GA+LEVC  KL  +P++
Subjt:  KPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEI

Query:  VGFIEEEKDQ-FPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKR
          F+  +K + F  ++++Y+  S P L +LDD G   E + I  W  + + +FL EK++R
Subjt:  VGFIEEEKDQ-FPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKR

Arabidopsis top hitse value%identityAlignment
AT1G05720.1 selenoprotein family protein5.3e-6671.34Show/hide
Query:  VKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYP
        +K+   A  +  +A  I+ +AS   A  KEQLS++ECEDLGF+GLALCSDCH+L+EY+KDQELVSDCLKCC++DS+D+ SK+TYSGA+LEVCMRKLVFYP
Subjt:  VKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYP

Query:  EIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSA
        EIVGFIEEEK++FPSVKVQYIFNSPPKL+MLD++G+HKESIRIDNWKREH+LQ+++EKVK ++A
Subjt:  EIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTTTCTCAGAGTTGTAAAGAAGCCGGCCACGGCGTTGACGCTGGCGGCAGCGGCAGCGGCGATAATTTTCGTAGCGTCAATGCCGTTGGCTTGGTCAAAGGAGCA
ACTCAGCTCGAGGGAATGTGAGGATCTAGGTTTCACAGGCCTTGCCCTCTGTTCTGATTGCCACACTTTAGCTGAATATATCAAAGATCAAGAATTAGTGTCAGACTGTT
TGAAGTGTTGCTCGGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCTGTGCTGGAGGTCTGCATGAGGAAACTAGTTTTCTATCCTGAAATTGTTGGC
TTCATTGAAGAAGAAAAGGATCAATTCCCTTCAGTTAAGGTCCAATATATCTTCAACTCTCCGCCGAAGCTGGTTATGCTAGATGATGAGGGCCAACATAAAGAAAGCAT
CAGGATTGACAATTGGAAACGTGAACATATTTTGCAGTTCCTGCAAGAGAAGGTTAAGCGATCTTCAGCAATTTAA
mRNA sequenceShow/hide mRNA sequence
GATTTTTCTCCAAAATTTGAAGTTAAAGAATTGGTCTTCCACTGAGAGTTTCTGATCGTCTCTAGACTTTGCTTCTTCACCCACAGTCGCCGGCGAACACATAGATGCAG
TTTCTCAGAGTTGTAAAGAAGCCGGCCACGGCGTTGACGCTGGCGGCAGCGGCAGCGGCGATAATTTTCGTAGCGTCAATGCCGTTGGCTTGGTCAAAGGAGCAACTCAG
CTCGAGGGAATGTGAGGATCTAGGTTTCACAGGCCTTGCCCTCTGTTCTGATTGCCACACTTTAGCTGAATATATCAAAGATCAAGAATTAGTGTCAGACTGTTTGAAGT
GTTGCTCGGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCTGTGCTGGAGGTCTGCATGAGGAAACTAGTTTTCTATCCTGAAATTGTTGGCTTCATT
GAAGAAGAAAAGGATCAATTCCCTTCAGTTAAGGTCCAATATATCTTCAACTCTCCGCCGAAGCTGGTTATGCTAGATGATGAGGGCCAACATAAAGAAAGCATCAGGAT
TGACAATTGGAAACGTGAACATATTTTGCAGTTCCTGCAAGAGAAGGTTAAGCGATCTTCAGCAATTTAAGGCTCTCTCTCTTTTCTTTTCTTAATCTCTGTAAAAAAAA
ACTTGATGCAGAAGTTGAATGAAACAATTATCAACCAAAAAACTTGAGCCGAACATTAATTTTTGTCAATTTCAAGGATAGTTGGAAAGATAACGGATTTACTTGTCTAA
Protein sequenceShow/hide protein sequence
MQFLRVVKKPATALTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEIVG
FIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI