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Lcy05g011960 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g011960
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionSuccinate dehydrogenase
Genome locationChr05:13711337..13714446
RNA-Seq ExpressionLcy05g011960
SyntenyLcy05g011960
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9595787.1 hypothetical protein Lalb_Chr17g0342441 [Lupinus albus]2.7e-1070.59Show/hide
Query:  EGATAKMIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE
        E    KMI+RKWSLLTGP  I GGIV ++AVANFIFVK DPF+KP ERK E
Subjt:  EGATAKMIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE

KAG4400452.1 hypothetical protein GLYMA_07G057502v4 [Glycine max]4.7e-1075.56Show/hide
Query:  MIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE
        MI+RKWSLLTGP AILGG+V+++A AN IFVK DPFLKP+ERK E
Subjt:  MIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE

KYP56081.1 hypothetical protein KK1_002311 [Cajanus cajan]4.7e-1075.56Show/hide
Query:  MIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE
        MI+RKWSLLTGP  ILGG+V ++A ANFIFVK DPFLKP+ERK E
Subjt:  MIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE

OAY49047.1 hypothetical protein MANES_05G025100v8 [Manihot esculenta]2.7e-1073.91Show/hide
Query:  KMIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE
        KMIHRKWSLLTGP AILGGIV ++ VAN IFVK+DPFLKPK++  +
Subjt:  KMIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE

XP_009798955.1 PREDICTED: uncharacterized protein LOC104245088 [Nicotiana sylvestris]2.7e-1066.13Show/hide
Query:  ELQRE-ERGNEEGATAKMIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE
        E +RE E   EE    +MIHRKWSLLTGP AILGGIV ++ VANFIFV+ DPFLKP +RK E
Subjt:  ELQRE-ERGNEEGATAKMIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE

TrEMBL top hitse value%identityAlignment
A0A151SMU9 Uncharacterized protein2.3e-1075.56Show/hide
Query:  MIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE
        MI+RKWSLLTGP  ILGG+V ++A ANFIFVK DPFLKP+ERK E
Subjt:  MIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE

A0A1U7YJG2 uncharacterized protein LOC1042450881.3e-1066.13Show/hide
Query:  ELQRE-ERGNEEGATAKMIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE
        E +RE E   EE    +MIHRKWSLLTGP AILGGIV ++ VANFIFV+ DPFLKP +RK E
Subjt:  ELQRE-ERGNEEGATAKMIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE

A0A2C9VSQ8 Uncharacterized protein1.3e-1073.91Show/hide
Query:  KMIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE
        KMIHRKWSLLTGP AILGGIV ++ VAN IFVK+DPFLKPK++  +
Subjt:  KMIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE

A0A2C9VSS0 Uncharacterized protein3.9e-1073.33Show/hide
Query:  MIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE
        MIHRKWSLLTGP AILGGIV ++ VAN IFVK+DPFLKPK++  +
Subjt:  MIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE

A0A6A4PA22 Uncharacterized protein1.3e-1070.59Show/hide
Query:  EGATAKMIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE
        E    KMI+RKWSLLTGP  I GGIV ++AVANFIFVK DPF+KP ERK E
Subjt:  EGATAKMIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCATAGCAATATGAGCCATTTTGGTCATTGGGGATCAGAAACTCAACTCAACGAATTGCAGAGAGAAGAAAGAGGAAACGAAGAAGGAGCAACAGCGAAGATGAT
CCACCGGAAATGGAGTCTTCTCACCGGCCCCACTGCAATCTTGGGCGGCATAGTTCTCTCTCTGGCCGTCGCCAACTTCATCTTCGTTAAAGAAGATCCGTTTCTGAAAC
CAAAGGAAAGGAAGCCAGAACCAGGTCGGGAATGTATAAGGGAACAGTCGGGTGTGTGGTCGACCCCGAAGCTGTCTAGAGAAGCAGAAGGATGGAGAACAAAAACCAAG
AAAAGAAATAATAATAAATCATCAATTTTCTACTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCATAGCAATATGAGCCATTTTGGTCATTGGGGATCAGAAACTCAACTCAACGAATTGCAGAGAGAAGAAAGAGGAAACGAAGAAGGAGCAACAGCGAAGATGAT
CCACCGGAAATGGAGTCTTCTCACCGGCCCCACTGCAATCTTGGGCGGCATAGTTCTCTCTCTGGCCGTCGCCAACTTCATCTTCGTTAAAGAAGATCCGTTTCTGAAAC
CAAAGGAAAGGAAGCCAGAACCAGGTCGGGAATGTATAAGGGAACAGTCGGGTGTGTGGTCGACCCCGAAGCTGTCTAGAGAAGCAGAAGGATGGAGAACAAAAACCAAG
AAAAGAAATAATAATAAATCATCAATTTTCTACTGGTGACTGATGATGTTTGATTCTGTCTTTGTTTCTTTTGTCAGCCTTCATCTAGTTTATATTTTTCTTATATTTTT
TCTCAAAATTTTTAAAAAGATAGATCAATAGAGGCAATGATTTAGCAATGAGAAAACAGAGGACTCTAGAATGAATAATAAGAATTTATTTCCCCAGTATCCTCAATCAA
TACATACATGTAGACCATGAAAAGTGTTCATGTTTCAGAAAAGCTGCAATAATTCTCCGGTTTGTGGTCTCTCAAATTTATTATATGTATGAGTTTTTCTTAAATTTTAT
AAGTGTACATGAAATTGA
Protein sequenceShow/hide protein sequence
MNHSNMSHFGHWGSETQLNELQREERGNEEGATAKMIHRKWSLLTGPTAILGGIVLSLAVANFIFVKEDPFLKPKERKPEPGRECIREQSGVWSTPKLSREAEGWRTKTK
KRNNNKSSIFYW