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Lcy05g012050 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g012050
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
Genome locationChr05:13828237..13853384
RNA-Seq ExpressionLcy05g012050
SyntenyLcy05g012050
Gene Ontology termsGO:0009086 - methionine biosynthetic process (biological process)
GO:0005829 - cytosol (cellular component)
GO:0003871 - 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0008705 - methionine synthase activity (molecular function)
InterPro domainsIPR002629 - Cobalamin-independent methionine synthase MetE, C-terminal/archaeal
IPR038071 - UROD/MetE-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PKU73266.1 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Dendrobium catenatum]2.8e-0670.59Show/hide
Query:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEY
        ATN  V +  + KKLNLPIL TTTI SFPQT ELR VRREYKANK S +EY
Subjt:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEY

XP_013451552.1 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 [Medicago truncatula]1.2e-0666.04Show/hide
Query:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK
        ATN    ++ + KKLNLP+L TTTI SFPQTPELR VRREYKA K S +EY K
Subjt:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK

XP_028761322.1 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase-like [Prosopis alba]2.1e-0666.67Show/hide
Query:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQKQ
        ATN    +  + KKLNLPIL TTTI SFPQT ELR VRREYKANK S +EY K+
Subjt:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQKQ

XP_028790502.1 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase-like isoform X1 [Prosopis alba]2.1e-0666.67Show/hide
Query:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQKQ
        ATN    +  + KKLNLPIL TTTI SFPQT ELR VRREYKANK S +EY K+
Subjt:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQKQ

XP_028790503.1 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase-like isoform X2 [Prosopis alba]2.1e-0666.67Show/hide
Query:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQKQ
        ATN    +  + KKLNLPIL TTTI SFPQT ELR VRREYKANK S +EY K+
Subjt:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQKQ

TrEMBL top hitse value%identityAlignment
A0A072UID0 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase6.0e-0766.04Show/hide
Query:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK
        ATN    ++ + KKLNLP+L TTTI SFPQTPELR VRREYKA K S +EY K
Subjt:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK

A0A2I0WC68 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase1.3e-0670.59Show/hide
Query:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEY
        ATN  V +  + KKLNLPIL TTTI SFPQT ELR VRREYKANK S +EY
Subjt:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEY

A0A5D3DPF4 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase1.7e-0667.92Show/hide
Query:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK
        ATN    +  + KKLNLPIL TTTI SFPQT ELR VRREYKANK S +EY K
Subjt:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK

A0A6A4R3A1 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase1.3e-0666.07Show/hide
Query:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQKQGT
        ATN    +  + KKLNLPIL TTTI SFPQT ELR VRREYKANK S +EY K  T
Subjt:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQKQGT

A0A6A5N003 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase1.3e-0666.07Show/hide
Query:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQKQGT
        ATN    +  + KKLNLPIL TTTI SFPQT ELR VRREYKANK S +EY K  T
Subjt:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQKQGT

SwissProt top hitse value%identityAlignment
O50008 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 15.2e-0864.15Show/hide
Query:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK
        ATN    +  + KKLNLPIL TTTI SFPQT ELR VRREYKA K S ++Y K
Subjt:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK

P93263 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase1.2e-0778.05Show/hide
Query:  KKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK
        KKLNLPIL TTTI SFPQT ELR VRREYKA K S +EY K
Subjt:  KKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK

Q2QLY4 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 28.9e-0864.71Show/hide
Query:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEY
        ATN    +  + KKLNLP+L TTTI SFPQT ELR VRREYKA K S  EY
Subjt:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEY

Q2QLY5 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 15.2e-0864.71Show/hide
Query:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEY
        ATN    +  + KKLNLP+L TTTI SFPQT ELR VRREYKA K S +EY
Subjt:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEY

Q9SRV5 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 22.6e-0775.61Show/hide
Query:  KKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK
        KKLNLPIL TTTI SFPQT ELR VRREYKA K S ++Y K
Subjt:  KKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK

Arabidopsis top hitse value%identityAlignment
AT3G03780.1 methionine synthase 21.8e-0875.61Show/hide
Query:  KKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK
        KKLNLPIL TTTI SFPQT ELR VRREYKA K S ++Y K
Subjt:  KKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK

AT3G03780.2 methionine synthase 21.8e-0875.61Show/hide
Query:  KKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK
        KKLNLPIL TTTI SFPQT ELR VRREYKA K S ++Y K
Subjt:  KKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK

AT3G03780.3 methionine synthase 21.8e-0875.61Show/hide
Query:  KKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK
        KKLNLPIL TTTI SFPQT ELR VRREYKA K S ++Y K
Subjt:  KKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK

AT5G17920.1 Cobalamin-independent synthase family protein3.7e-0964.15Show/hide
Query:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK
        ATN    +  + KKLNLPIL TTTI SFPQT ELR VRREYKA K S ++Y K
Subjt:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK

AT5G17920.2 Cobalamin-independent synthase family protein3.7e-0964.15Show/hide
Query:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK
        ATN    +  + KKLNLPIL TTTI SFPQT ELR VRREYKA K S ++Y K
Subjt:  ATNAEVHVQ-KAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCATAAATCCAATTCCCCACCGCACCAATGTACACTCTTTCTCTCTCGGCGAAACACACACCCAGTCGCGCCACCCCTACTCCATCCGTGGCTTCCTCTCACCTCC
GGCCATCTCCGGCGACAGCAACTGCTGCCAGCGCAACACTCCTTCGACGCAAGTTGTAGCAACATTAGTGTGTCGTTCACGATCAGATCGACTCGACAGCATCAGCTTCC
ATATCCTTCATGTTTTCGACAAGCTGCAGTGTCGACGGGTCGATTCCGATGGCTTCGATCTCTCCAACACGCGGTGGGTTCATTTTCTGGTGATTTGGGCAATGGGTATT
GGATTCTCGGTGGTTGCTAGCGATTTCAAGCTATGGGCATTCTTTGCTACTAATGCTGAAGTTCATGTTCAAAAAGCGAAGAAGCTTAATCTTCCAATCCTTCTAACCAC
CACCATTGATTCCTTCCCTCAAACTCCTGAACTCAGGATGGTTCGTCGTGAATACAAAGCTAACAAGTCATCCATCAAAGAGTATCAAAAGCAAGGTACAAGTAGGAAGA
ATATGCAGTTTTGTTCATTTTGCTTAGGAGAACGACCTTTAGGAAGGGTAACCTTTGATTTTGCAAAGAATCACAAAAAGCTCAAACATGGAAATCAGAGTGCTTGTGGC
ATAGGAATTGTCATACGTGATGGCGGTACAGACTCTATCCTCTCTGGGGTGTATTTCTCCATTGGGCGCGAAAGCGGTAGCGGTATTAGAAGGGATGCGTCTGGCCAGGA
AGTTAAACACTCTTTGTCTCTGATAAATACAATCAATGATGTTGTACAGGGGGAGGCTAGTATTGCGGCAACAATCTGGGACATTAAAGCAAGTCAAAATACCTTTCAGA
AAGATCTTCGAACGGCAGCGACGGAACGCACGCGTTCGACCCTTGATCTGGACGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCATAAATCCAATTCCCCACCGCACCAATGTACACTCTTTCTCTCTCGGCGAAACACACACCCAGTCGCGCCACCCCTACTCCATCCGTGGCTTCCTCTCACCTCC
GGCCATCTCCGGCGACAGCAACTGCTGCCAGCGCAACACTCCTTCGACGCAAGTTGTAGCAACATTAGTGTGTCGTTCACGATCAGATCGACTCGACAGCATCAGCTTCC
ATATCCTTCATGTTTTCGACAAGCTGCAGTGTCGACGGGTCGATTCCGATGGCTTCGATCTCTCCAACACGCGGTGGGTTCATTTTCTGGTGATTTGGGCAATGGGTATT
GGATTCTCGGTGGTTGCTAGCGATTTCAAGCTATGGGCATTCTTTGCTACTAATGCTGAAGTTCATGTTCAAAAAGCGAAGAAGCTTAATCTTCCAATCCTTCTAACCAC
CACCATTGATTCCTTCCCTCAAACTCCTGAACTCAGGATGGTTCGTCGTGAATACAAAGCTAACAAGTCATCCATCAAAGAGTATCAAAAGCAAGGTACAAGTAGGAAGA
ATATGCAGTTTTGTTCATTTTGCTTAGGAGAACGACCTTTAGGAAGGGTAACCTTTGATTTTGCAAAGAATCACAAAAAGCTCAAACATGGAAATCAGAGTGCTTGTGGC
ATAGGAATTGTCATACGTGATGGCGGTACAGACTCTATCCTCTCTGGGGTGTATTTCTCCATTGGGCGCGAAAGCGGTAGCGGTATTAGAAGGGATGCGTCTGGCCAGGA
AGTTAAACACTCTTTGTCTCTGATAAATACAATCAATGATGTTGTACAGGGGGAGGCTAGTATTGCGGCAACAATCTGGGACATTAAAGCAAGTCAAAATACCTTTCAGA
AAGATCTTCGAACGGCAGCGACGGAACGCACGCGTTCGACCCTTGATCTGGACGACTAA
Protein sequenceShow/hide protein sequence
MPINPIPHRTNVHSFSLGETHTQSRHPYSIRGFLSPPAISGDSNCCQRNTPSTQVVATLVCRSRSDRLDSISFHILHVFDKLQCRRVDSDGFDLSNTRWVHFLVIWAMGI
GFSVVASDFKLWAFFATNAEVHVQKAKKLNLPILLTTTIDSFPQTPELRMVRREYKANKSSIKEYQKQGTSRKNMQFCSFCLGERPLGRVTFDFAKNHKKLKHGNQSACG
IGIVIRDGGTDSILSGVYFSIGRESGSGIRRDASGQEVKHSLSLINTINDVVQGEASIAATIWDIKASQNTFQKDLRTAATERTRSTLDLDD