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Lcy05g012740 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g012740
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionprotein DA1-like
Genome locationChr05:14780985..14795321
RNA-Seq ExpressionLcy05g012740
SyntenyLcy05g012740
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR022087 - Protein DA1-like
IPR026960 - Reverse transcriptase zinc-binding domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9844077.1 hypothetical protein H0E87_018311, partial [Populus deltoides]3.1e-2454.46Show/hide
Query:  VMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA-----------DSQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGLKHT
        VM+G ILAHE MHAWLRLQ V  L  ++EEGICQV+G  WLDWF+A            +QF +NL +TFK +VE     AYGDGFR+AQWAV+  GL H 
Subjt:  VMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA-----------DSQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGLKHT

Query:  INEIVTRRTLPK
        I  I+  +TLP+
Subjt:  INEIVTRRTLPK

KAG6761486.1 hypothetical protein POTOM_034710 [Populus tomentosa]1.4e-2455.36Show/hide
Query:  VMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA-----------DSQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGLKHT
        VM+G ILAHE MHAWLRLQ V NL  ++EEGICQV+G  WLDWF+A            +QF++NL  TFK +VE     AYGDGFR+AQWAV+  GL H 
Subjt:  VMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA-----------DSQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGLKHT

Query:  INEIVTRRTLPK
        I  I+  +TLP+
Subjt:  INEIVTRRTLPK

PNT20775.1 hypothetical protein POPTR_009G111500 [Populus trichocarpa]2.3e-2454.46Show/hide
Query:  VMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA-----------DSQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGLKHT
        VM+G ILAHE MHAWLRLQ V  L  ++EEGICQV+G  WLDWF+A            +QF++NL +TFK +VE     AYGDGFR+AQWAV+  GL H 
Subjt:  VMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA-----------DSQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGLKHT

Query:  INEIVTRRTLPK
        I  I+  +TLP+
Subjt:  INEIVTRRTLPK

TKS05322.1 hypothetical protein D5086_0000134190 [Populus alba]2.3e-2454.46Show/hide
Query:  VMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA-----------DSQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGLKHT
        VM+G ILAHE MHAWLRLQ V  L  ++EEGICQV+G  WLDWF+A            +QF++NL +TFK +VE     AYGDGFR+AQWAV+  GL H 
Subjt:  VMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA-----------DSQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGLKHT

Query:  INEIVTRRTLPK
        I  I+  +TLP+
Subjt:  INEIVTRRTLPK

XP_031744668.1 protein DA1-like [Cucumis sativus]5.2e-3266.36Show/hide
Query:  MSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA----------DSQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGLKHTIN
        M+GAILAHEMMHAW RLQ VVNLEAKVEEGICQVIGR WLDW++           ++QF KNLM+  KH VE+D SEAYG+GFR+AQWAV   GLK+TIN
Subjt:  MSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA----------DSQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGLKHTIN

Query:  EIVTRRTLPK
         I+T  TLP+
Subjt:  EIVTRRTLPK

TrEMBL top hitse value%identityAlignment
A0A4U5Q6F3 Uncharacterized protein1.1e-2454.46Show/hide
Query:  VMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA-----------DSQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGLKHT
        VM+G ILAHE MHAWLRLQ V  L  ++EEGICQV+G  WLDWF+A            +QF++NL +TFK +VE     AYGDGFR+AQWAV+  GL H 
Subjt:  VMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA-----------DSQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGLKHT

Query:  INEIVTRRTLPK
        I  I+  +TLP+
Subjt:  INEIVTRRTLPK

A0A6P6AB63 protein DA1-like2.8e-2350.44Show/hide
Query:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFK-----------ADSQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGLKH
        R+M+GAI+AHE+MHAWL+ + V NLE KVEEGICQVI   WL+WF+            ++QF +NL +TF+  VE+DSS AYG+GFR+A+WAV   G   
Subjt:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFK-----------ADSQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGLKH

Query:  TINEIVTRRTLPK
         +N ++   TLP+
Subjt:  TINEIVTRRTLPK

B9HRS3 Uncharacterized protein1.1e-2454.46Show/hide
Query:  VMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA-----------DSQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGLKHT
        VM+G ILAHE MHAWLRLQ V  L  ++EEGICQV+G  WLDWF+A            +QF++NL +TFK +VE     AYGDGFR+AQWAV+  GL H 
Subjt:  VMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA-----------DSQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGLKHT

Query:  INEIVTRRTLPK
        I  I+  +TLP+
Subjt:  INEIVTRRTLPK

M5VMD6 Uncharacterized protein (Fragment)4.8e-2353.91Show/hide
Query:  RVMSGAILAHEMMHAWLRLQEV--VNLEAKVEEGICQVIGRMWLDWFKAD-----------SQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGL
        +VM+GAILAHEMMHAW RL+ +    LE KVEEG+CQVIGR WL+W +A            +QF +NL+ET+K+ V+M SS  YG GFREA+WAV    L
Subjt:  RVMSGAILAHEMMHAWLRLQEV--VNLEAKVEEGICQVIGRMWLDWFKAD-----------SQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGL

Query:  KHTINEIVTRRTLPK
          TI+ I+T R LP+
Subjt:  KHTINEIVTRRTLPK

V4SHC1 Uncharacterized protein (Fragment)1.6e-2351.82Show/hide
Query:  MSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA-----------DSQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGLKHTI
        M+G +LAHEMMHAWL +Q +  LE K+ EGICQV+G  WLDWF++           ++Q+ +NL + +KH VE+DSS AYGDGFR+A+ +VA  GL++ I
Subjt:  MSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA-----------DSQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGLKHTI

Query:  NEIVTRRTLP
        N I   RTLP
Subjt:  NEIVTRRTLP

SwissProt top hitse value%identityAlignment
P0C7Q8 Protein DA16.4e-1743.1Show/hide
Query:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA----------------------DSQFVKNLMETFKHQVEMDSSEAYGDGFREA
        R+++G+ILAHEMMHAW+RL+    L   VEEGICQV+   WLD   A                       SQ+ + L E FKHQ+E D+S  YGDGFR  
Subjt:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA----------------------DSQFVKNLMETFKHQVEMDSSEAYGDGFREA

Query:  QWAVASSGLKHTINEI
        + AV   GL+ T+  I
Subjt:  QWAVASSGLKHTINEI

Q0WSN2 Protein DA1-related 29.3e-1638.76Show/hide
Query:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKADSQFVKNLMET----------------------------FKHQVEMDSSEAYG
        R+++GAILAHE+MH WLRL    NL  +VEEGICQV+  MWL+         +NL  T                            FKHQ+  D+S AYG
Subjt:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKADSQFVKNLMET----------------------------FKHQVEMDSSEAYG

Query:  DGFREAQWAVASSGLKHTINEIVTRRTLP
         GFR A  A    GL+ T++ I    T P
Subjt:  DGFREAQWAVASSGLKHTINEIVTRRTLP

Q84WJ0 Protein DA1-related 57.1e-1640.62Show/hide
Query:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLD---WFKAD---------------------------SQFVKNLMETFKHQVEMDSSEA
        R+++G ILAHEMMHAWLRL   +NL   +EEGICQV+G +WL+   +  AD                           S F K L+E  K+Q+E D S  
Subjt:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLD---WFKAD---------------------------SQFVKNLMETFKHQVEMDSSEA

Query:  YGDGFREAQWAVASSGLKHTINEIVTRR
        YG GFR     V +S L+ T+ EI+ RR
Subjt:  YGDGFREAQWAVASSGLKHTINEIVTRR

Q8W4F0 Protein DA1-related 16.2e-2044.44Show/hide
Query:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFK-------------------------ADSQFVKNLMETFKHQVEMDSSEAYGDGF
        R+++G+ILAHEMMHAWLRL    NL  +VEEGICQV+  MWL+                              S F K L E FKHQ+E DSS AYGDGF
Subjt:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFK-------------------------ADSQFVKNLMETFKHQVEMDSSEAYGDGF

Query:  REAQWAVASSGLKHTINEIVTRRTLP
        R+   AV   GL+ T++ I    T P
Subjt:  REAQWAVASSGLKHTINEIVTRRTLP

Q9FJX9 Protein DA1-related 71.7e-1439.68Show/hide
Query:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFK-------------------------ADSQFVKNLMETFKHQVEMDSSEAYGDGF
        R+++G ILAHEMMHAWLRL    NL+ ++EEGICQV+G MWL+                            A S + K L+E  K Q+E D S  YG GF
Subjt:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFK-------------------------ADSQFVKNLMETFKHQVEMDSSEAYGDGF

Query:  REAQWAVASSGLKHTINEIVTRRTLP
        R+    V+ S L H I + +   T P
Subjt:  REAQWAVASSGLKHTINEIVTRRTLP

Arabidopsis top hitse value%identityAlignment
AT1G19270.1 DA14.6e-1843.1Show/hide
Query:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA----------------------DSQFVKNLMETFKHQVEMDSSEAYGDGFREA
        R+++G+ILAHEMMHAW+RL+    L   VEEGICQV+   WLD   A                       SQ+ + L E FKHQ+E D+S  YGDGFR  
Subjt:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKA----------------------DSQFVKNLMETFKHQVEMDSSEAYGDGFREA

Query:  QWAVASSGLKHTINEI
        + AV   GL+ T+  I
Subjt:  QWAVASSGLKHTINEI

AT2G39830.1 DA1-related protein 26.6e-1738.76Show/hide
Query:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKADSQFVKNLMET----------------------------FKHQVEMDSSEAYG
        R+++GAILAHE+MH WLRL    NL  +VEEGICQV+  MWL+         +NL  T                            FKHQ+  D+S AYG
Subjt:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKADSQFVKNLMET----------------------------FKHQVEMDSSEAYG

Query:  DGFREAQWAVASSGLKHTINEIVTRRTLP
         GFR A  A    GL+ T++ I    T P
Subjt:  DGFREAQWAVASSGLKHTINEIVTRRTLP

AT4G36860.1 LIM domain-containing protein4.4e-2144.44Show/hide
Query:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFK-------------------------ADSQFVKNLMETFKHQVEMDSSEAYGDGF
        R+++G+ILAHEMMHAWLRL    NL  +VEEGICQV+  MWL+                              S F K L E FKHQ+E DSS AYGDGF
Subjt:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFK-------------------------ADSQFVKNLMETFKHQVEMDSSEAYGDGF

Query:  REAQWAVASSGLKHTINEIVTRRTLP
        R+   AV   GL+ T++ I    T P
Subjt:  REAQWAVASSGLKHTINEIVTRRTLP

AT5G66610.1 DA1-related protein 71.2e-1539.68Show/hide
Query:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFK-------------------------ADSQFVKNLMETFKHQVEMDSSEAYGDGF
        R+++G ILAHEMMHAWLRL    NL+ ++EEGICQV+G MWL+                            A S + K L+E  K Q+E D S  YG GF
Subjt:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFK-------------------------ADSQFVKNLMETFKHQVEMDSSEAYGDGF

Query:  REAQWAVASSGLKHTINEIVTRRTLP
        R+    V+ S L H I + +   T P
Subjt:  REAQWAVASSGLKHTINEIVTRRTLP

AT5G66630.1 DA1-related protein 55.0e-1740.62Show/hide
Query:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLD---WFKAD---------------------------SQFVKNLMETFKHQVEMDSSEA
        R+++G ILAHEMMHAWLRL   +NL   +EEGICQV+G +WL+   +  AD                           S F K L+E  K+Q+E D S  
Subjt:  RVMSGAILAHEMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLD---WFKAD---------------------------SQFVKNLMETFKHQVEMDSSEA

Query:  YGDGFREAQWAVASSGLKHTINEIVTRR
        YG GFR     V +S L+ T+ EI+ RR
Subjt:  YGDGFREAQWAVASSGLKHTINEIVTRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGATAGTAATTGGAAACCTTTGAGAGTTACCCAGGAGTTTAAAAGTAAAAAAGTGATGGAAATTCTGAACTCGGATGGAACTTGGAAAGAAGAAGTCATTAAAGA
CTCATTTCTCCCGTGTGATGTAGAAACAATTCTGAATATGCCAAAGAGAAACATGACCACCGAAGATGAGATTATATGGGGGAAAGATCTAAAAGGGATTTTCACCGTGA
AAAGTGCTTATCACCTCGCTACCTTTAAGGATTCCCAATTATCAGCTTCGATTTCTGATCTTTCGGTATCTAAAAGACCGTGGAAGTCAATTTGGCAGCTTAACAGCAGA
CCAAAAGTGAAAATTCACCTTTGGAAAGCTACGAGGGATGCCCTCCCTACTCTCGATAATATTAAGAAAAAAGGACTTATAACTAACGAGAGTGGAAATTGTGATGCTTC
GAACTCAGTAGGGCTGGGGTGGATTATCCGAGACTCAGACGGTTCTTTGATTGGAGCTGGATGCAAGAAAATTAGCAGGAAATTAGAAATCAAAATGCTGGAAAGTATGG
CTATTCTCGAGGGTCTTCTCCAAATTGACAAACGTTTTAAGGCTTACCCGGAGCTCCTTGATCGCGAAGTGGTGGTCGAATCGGACATTGCAGTGGTCATCAAGCTGATC
AGTAGAGAAGACGAAGACCATTCGGAGATTTCCCTGCTGATAGACAAGGAAGATCATGTGAATGAAGACGAAATTGATGATATAGCTTGTGCCATAGAGCTCTCTCTTCT
TGATCTCGACCGTCAAGATGAACAATTTGTGGACACAGGAGGAGGGGCCATATTGGAAATAGCCGAGTTTGTGATGTTTGTGATGAACCAATTAGGAGAGCAATGGGTAA
GCTTGAATTTTGGAACCAAATTTTTTGTCACTCTCATTGGTTCGACAAGACTCCCCAATGCTGCGGTTGTACGCGCTTCAAGGGTTATGAGTGGAGCAATTTTAGCTCAT
GAGATGATGCATGCTTGGTTACGACTTCAAGAGGTTGTAAATTTGGAGGCAAAGGTAGAGGAAGGAATTTGCCAAGTGATAGGTCGCATGTGGCTGGATTGGTTCAAAGC
CGACAGTCAGTTCGTGAAGAACCTTATGGAAACTTTCAAGCACCAGGTTGAAATGGACTCTTCTGAAGCCTATGGTGACGGTTTCAGAGAAGCTCAGTGGGCTGTCGCCA
GCTCTGGCCTTAAACACACCATCAATGAAATTGTTACTCGTCGAACTCTACCCAAGAATAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGATAGTAATTGGAAACCTTTGAGAGTTACCCAGGAGTTTAAAAGTAAAAAAGTGATGGAAATTCTGAACTCGGATGGAACTTGGAAAGAAGAAGTCATTAAAGA
CTCATTTCTCCCGTGTGATGTAGAAACAATTCTGAATATGCCAAAGAGAAACATGACCACCGAAGATGAGATTATATGGGGGAAAGATCTAAAAGGGATTTTCACCGTGA
AAAGTGCTTATCACCTCGCTACCTTTAAGGATTCCCAATTATCAGCTTCGATTTCTGATCTTTCGGTATCTAAAAGACCGTGGAAGTCAATTTGGCAGCTTAACAGCAGA
CCAAAAGTGAAAATTCACCTTTGGAAAGCTACGAGGGATGCCCTCCCTACTCTCGATAATATTAAGAAAAAAGGACTTATAACTAACGAGAGTGGAAATTGTGATGCTTC
GAACTCAGTAGGGCTGGGGTGGATTATCCGAGACTCAGACGGTTCTTTGATTGGAGCTGGATGCAAGAAAATTAGCAGGAAATTAGAAATCAAAATGCTGGAAAGTATGG
CTATTCTCGAGGGTCTTCTCCAAATTGACAAACGTTTTAAGGCTTACCCGGAGCTCCTTGATCGCGAAGTGGTGGTCGAATCGGACATTGCAGTGGTCATCAAGCTGATC
AGTAGAGAAGACGAAGACCATTCGGAGATTTCCCTGCTGATAGACAAGGAAGATCATGTGAATGAAGACGAAATTGATGATATAGCTTGTGCCATAGAGCTCTCTCTTCT
TGATCTCGACCGTCAAGATGAACAATTTGTGGACACAGGAGGAGGGGCCATATTGGAAATAGCCGAGTTTGTGATGTTTGTGATGAACCAATTAGGAGAGCAATGGGTAA
GCTTGAATTTTGGAACCAAATTTTTTGTCACTCTCATTGGTTCGACAAGACTCCCCAATGCTGCGGTTGTACGCGCTTCAAGGGTTATGAGTGGAGCAATTTTAGCTCAT
GAGATGATGCATGCTTGGTTACGACTTCAAGAGGTTGTAAATTTGGAGGCAAAGGTAGAGGAAGGAATTTGCCAAGTGATAGGTCGCATGTGGCTGGATTGGTTCAAAGC
CGACAGTCAGTTCGTGAAGAACCTTATGGAAACTTTCAAGCACCAGGTTGAAATGGACTCTTCTGAAGCCTATGGTGACGGTTTCAGAGAAGCTCAGTGGGCTGTCGCCA
GCTCTGGCCTTAAACACACCATCAATGAAATTGTTACTCGTCGAACTCTACCCAAGAATAAATAA
Protein sequenceShow/hide protein sequence
MNDSNWKPLRVTQEFKSKKVMEILNSDGTWKEEVIKDSFLPCDVETILNMPKRNMTTEDEIIWGKDLKGIFTVKSAYHLATFKDSQLSASISDLSVSKRPWKSIWQLNSR
PKVKIHLWKATRDALPTLDNIKKKGLITNESGNCDASNSVGLGWIIRDSDGSLIGAGCKKISRKLEIKMLESMAILEGLLQIDKRFKAYPELLDREVVVESDIAVVIKLI
SREDEDHSEISLLIDKEDHVNEDEIDDIACAIELSLLDLDRQDEQFVDTGGGAILEIAEFVMFVMNQLGEQWVSLNFGTKFFVTLIGSTRLPNAAVVRASRVMSGAILAH
EMMHAWLRLQEVVNLEAKVEEGICQVIGRMWLDWFKADSQFVKNLMETFKHQVEMDSSEAYGDGFREAQWAVASSGLKHTINEIVTRRTLPKNK