; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy05g013080 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g013080
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionBEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein .
Genome locationChr05:15331030..15331656
RNA-Seq ExpressionLcy05g013080
SyntenyLcy05g013080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572024.1 hypothetical protein SDJN03_28752, partial [Cucurbita argyrosperma subsp. sororia]9.6e-6466.29Show/hide
Query:  RRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEK
        RR+R R D   IEPPYPWS E RA +H L+YLQSN+I+TI GDV C +CE+ YE++Y+L+ KF+EIA FIE+ RD MH+RAP  W + +LP+CE C EE 
Subjt:  RRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEK

Query:  CVEPVIPENDHDN----INWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLFH
        CVEP+IP+ + DN    INWLFLLLGQL+GRL+L QLKYFCA+T NHRTGAK+RL++LTYLALCKQLQPSNRLF+
Subjt:  CVEPVIPENDHDN----INWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLFH

KAG7011696.1 hypothetical protein SDJN02_26602, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-6466.29Show/hide
Query:  RRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEK
        RR+R R D   IEPPYPWS E RA +H L+YLQSN+I+TI GDV C +CE+ YE++Y+L+ KF+EIA FIE+ RD MH+RAP  W + +LP+CE C EE 
Subjt:  RRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEK

Query:  CVEPVIPENDHDN----INWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLFH
        CVEP+IP+ + DN    INWLFLLLGQL+GRL+L QLKYFCA+T NHRTGAK+RL++LTYLALCKQLQPSNRLF+
Subjt:  CVEPVIPENDHDN----INWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLFH

XP_022135937.1 uncharacterized protein LOC111007768 [Momordica charantia]5.3e-7068.06Show/hide
Query:  RLPPPPPPPPPPQQPPEHPRRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERA
        R  P P     P  P    RR+R  L NTPI+PPYPWSTEH+AVVH+L+YL+ N ILTITGDV C RCEK+Y ++YDL+ KFEEIASFIE+N+ T+H+RA
Subjt:  RLPPPPPPPPPPQQPPEHPRRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERA

Query:  PSSWVDSVLPDCELCGEEKCVEPVIPENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLFHR
        P SW +    DC+LCGEE CV P IPE D+ NINWLFLLLGQ++GRL+L  LKYFCAYTNNHRTGAKNRL+YLTYL LCKQLQPS  LFHR
Subjt:  PSSWVDSVLPDCELCGEEKCVEPVIPENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLFHR

XP_022135938.1 probable serine/threonine-protein kinase samkC [Momordica charantia]3.3e-6459.91Show/hide
Query:  NTNQSYEGLDLELSLRLPPP--PPPPPPPQQPPEHPRRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFE
        NT+QS +      S +  P   P      QQ P   RR R +  +T IEPPYPWST +RAVVH+L YLQ N ILTITGDV+C +C+K+Y+++YDL+ KF+
Subjt:  NTNQSYEGLDLELSLRLPPP--PPPPPPPQQPPEHPRRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFE

Query:  EIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEKCVEPVIPENDHD----NINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALC
        EIASFIE+N+DT+H+RAPSSW +  LP+C+ CG+E C+ PVIP  D D    NINWLFLLLGQ++G L L  LKYFC YTNNHRT AK+RL+YLTYL+LC
Subjt:  EIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEKCVEPVIPENDHD----NINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALC

Query:  KQLQPSNRLFHR
        KQLQPS  LFHR
Subjt:  KQLQPSNRLFHR

XP_038895979.1 junction-mediating and -regulatory protein-like [Benincasa hispida]4.3e-6451.71Show/hide
Query:  NTNQSYEGLDLELSLRLPPPP----PPPPPPQQPP-------------------------------------------------------EHPRRTRFRL
        N N      +LELSLRLP PP    PPPPPP  PP                                                         PRR R R 
Subjt:  NTNQSYEGLDLELSLRLPPPP----PPPPPPQQPP-------------------------------------------------------EHPRRTRFRL

Query:  DNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEKCVEPVIP
        D T IEPPYPWST+ RAV+HEL YLQSN+I+TI G+V+C +CE++YEM+YDL+ KF EIA FIE  +D+MH+RAP  W   +LP+C LC +E+CVEPVI 
Subjt:  DNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEKCVEPVIP

Query:  ENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLF
        E D+  INWLFLLLG+ LG L+L QLKYFCA TN HRTGAKNRLLYL YL LC QLQPSN LF
Subjt:  ENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLF

TrEMBL top hitse value%identityAlignment
A0A1S3AZB1 protein PAF1 homolog6.1e-5659.04Show/hide
Query:  PPPPPPPPPQ---QPPE--HPRRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHE
        PP  P P  Q   QPPE   P+R R + DN+ IEPPYPWSTE  AV+H+L+YL++N+ILTI G+V+C RC+++ E++Y+L+ KF+EI  FIE+ +D MH+
Subjt:  PPPPPPPPPQ---QPPE--HPRRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHE

Query:  RAPSSWVDSVLPDCELCGEEKCVEPVIPENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSN
        RAP  WV+ +L +C  C +E+CVEP+I E  + NINWLFLLLG  LG L+L QLKYFC  TN HRTGAK+RL+YLTYLALCKQLQP++
Subjt:  RAPSSWVDSVLPDCELCGEEKCVEPVIPENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSN

A0A6J1C462 uncharacterized protein LOC1110077682.5e-7068.06Show/hide
Query:  RLPPPPPPPPPPQQPPEHPRRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERA
        R  P P     P  P    RR+R  L NTPI+PPYPWSTEH+AVVH+L+YL+ N ILTITGDV C RCEK+Y ++YDL+ KFEEIASFIE+N+ T+H+RA
Subjt:  RLPPPPPPPPPPQQPPEHPRRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERA

Query:  PSSWVDSVLPDCELCGEEKCVEPVIPENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLFHR
        P SW +    DC+LCGEE CV P IPE D+ NINWLFLLLGQ++GRL+L  LKYFCAYTNNHRTGAKNRL+YLTYL LCKQLQPS  LFHR
Subjt:  PSSWVDSVLPDCELCGEEKCVEPVIPENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLFHR

A0A6J1C690 probable serine/threonine-protein kinase samkC1.6e-6459.91Show/hide
Query:  NTNQSYEGLDLELSLRLPPP--PPPPPPPQQPPEHPRRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFE
        NT+QS +      S +  P   P      QQ P   RR R +  +T IEPPYPWST +RAVVH+L YLQ N ILTITGDV+C +C+K+Y+++YDL+ KF+
Subjt:  NTNQSYEGLDLELSLRLPPP--PPPPPPPQQPPEHPRRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFE

Query:  EIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEKCVEPVIPENDHD----NINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALC
        EIASFIE+N+DT+H+RAPSSW +  LP+C+ CG+E C+ PVIP  D D    NINWLFLLLGQ++G L L  LKYFC YTNNHRT AK+RL+YLTYL+LC
Subjt:  EIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEKCVEPVIPENDHD----NINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALC

Query:  KQLQPSNRLFHR
        KQLQPS  LFHR
Subjt:  KQLQPSNRLFHR

A0A6J1GM83 mucin-16-like4.7e-6466.29Show/hide
Query:  RRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEK
        RR+R R D   IEPPYPWS E RA +H L+YLQSN+I+TI GDV C +CE+ YE++Y+L+ KF+EIA FIE+ RD MH+RAP  W + +LP+CE C EE 
Subjt:  RRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEK

Query:  CVEPVIPENDHDN----INWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLFH
        CVEP+IP+ + DN    INWLFLLLGQL+GRL+L QLKYFCA+T NHRTGAK+RL++LTYLALCKQLQPSNRLF+
Subjt:  CVEPVIPENDHDN----INWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLFH

A0A6J1I8I0 uncharacterized protein KIAA0754-like1.8e-6365.71Show/hide
Query:  RRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEK
        RR+R R D   IEPPYPWS E RA +H L+YLQSN+I+ I GDV C +CE+ YE++Y+L+ KF+EIA FIE+ RD MH+RAP  W + +LP+CE C EE 
Subjt:  RRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEK

Query:  CVEPVIPENDHDN----INWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLFH
        CVEP+IP+ + DN    INWLFLLLGQL+GRL+L QLKYFCA+T NHRTGAK+RL++LTYLALCKQLQPSNRLF+
Subjt:  CVEPVIPENDHDN----INWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLFH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49330.1 hydroxyproline-rich glycoprotein family protein2.0e-4347.64Show/hide
Query:  SLRLPPPPPPPPPPQQPPEHPRRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHE
        S  L PPP   P       +  R+     +  I PP+PW+T  R  +  L+YL+SN I TITG+V+C  CEK Y++ Y+L E+F E+  F    +  M +
Subjt:  SLRLPPPPPPPPPPQQPPEHPRRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHE

Query:  RAPSSWVDSVLPDCELCGEEKCVEPVIPENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLF
        RA   W       CELCG EK V+PVI E     INWLFLLLGQ LG   L QLK FC ++ NHRTGAK+R+LYLTY+ LCK LQP + LF
Subjt:  RAPSSWVDSVLPDCELCGEEKCVEPVIPENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLF

AT2G16190.1 BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1)5.5e-3340.53Show/hide
Query:  SLRLPPPPPPPPPPQQPPEHPRR----TRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRD
        ++ L  P    PP  Q   + +R        + +  I PPYPW+T+    +     L SN+I  I+G V C  C++   ++Y+L EKF E+  +I+ N++
Subjt:  SLRLPPPPPPPPPPQQPPEHPRR----TRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRD

Query:  TMHERAPSSWVDSVLPDCELCGEEKCVEPVIPENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQP
         M  RAP SW    L  C  C  E  ++PV+ E   + INWLFLLLGQ+LG   L QL+YFC   + HRTG+K+R++Y+TYL+LCKQL P
Subjt:  TMHERAPSSWVDSVLPDCELCGEEKCVEPVIPENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQP

AT2G16190.2 FUNCTIONS IN: molecular_function unknown4.5e-1936.71Show/hide
Query:  SLRLPPPPPPPPPPQQPPEHPRR----TRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRD
        ++ L  P    PP  Q   + +R        + +  I PPYPW+T+    +     L SN+I  I+G V C  C++   ++Y+L EKF E+  +I+ N++
Subjt:  SLRLPPPPPPPPPPQQPPEHPRR----TRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRD

Query:  TMHERAPSSWVDSVLPDCELCGEEKCVEPVIPENDHDNINWLFLLLGQLLGRLRLHQL
         M  RAP SW    L  C  C  E  ++PV+ E   + INWLFLLLGQ+LG   L QL
Subjt:  TMHERAPSSWVDSVLPDCELCGEEKCVEPVIPENDHDNINWLFLLLGQLLGRLRLHQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATACCAACCAAAGCTACGAGGGTCTCGATCTCGAACTCTCCCTCCGCCTGCCGCCGCCGCCGCCTCCTCCACCTCCTCCGCAGCAGCCACCCGAACATCCGAG
ACGAACGAGGTTTCGACTAGACAACACGCCGATCGAGCCACCATATCCATGGTCGACAGAGCACCGGGCGGTAGTCCACGAGCTCGACTACCTCCAATCGAACAGCATCC
TGACGATCACCGGTGACGTCGAGTGCGGGCGGTGCGAGAAACGGTACGAGATGAAGTACGACCTGCTCGAGAAGTTCGAGGAGATAGCGAGTTTCATAGAGCAAAACAGG
GACACCATGCACGAGAGAGCGCCGAGTTCGTGGGTGGACTCGGTTTTGCCGGATTGCGAGTTATGTGGGGAAGAGAAGTGCGTGGAGCCGGTGATTCCTGAGAATGATCA
CGACAACATTAACTGGCTGTTCTTGCTTTTGGGACAATTGCTTGGACGTTTGAGACTCCATCAGCTCAAATATTTCTGTGCTTACACCAACAATCATCGGACTGGTGCAA
AGAATCGGCTTCTTTATCTCACTTATCTTGCTTTGTGTAAGCAGCTTCAGCCCTCCAACAGACTCTTCCATCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATACCAACCAAAGCTACGAGGGTCTCGATCTCGAACTCTCCCTCCGCCTGCCGCCGCCGCCGCCTCCTCCACCTCCTCCGCAGCAGCCACCCGAACATCCGAG
ACGAACGAGGTTTCGACTAGACAACACGCCGATCGAGCCACCATATCCATGGTCGACAGAGCACCGGGCGGTAGTCCACGAGCTCGACTACCTCCAATCGAACAGCATCC
TGACGATCACCGGTGACGTCGAGTGCGGGCGGTGCGAGAAACGGTACGAGATGAAGTACGACCTGCTCGAGAAGTTCGAGGAGATAGCGAGTTTCATAGAGCAAAACAGG
GACACCATGCACGAGAGAGCGCCGAGTTCGTGGGTGGACTCGGTTTTGCCGGATTGCGAGTTATGTGGGGAAGAGAAGTGCGTGGAGCCGGTGATTCCTGAGAATGATCA
CGACAACATTAACTGGCTGTTCTTGCTTTTGGGACAATTGCTTGGACGTTTGAGACTCCATCAGCTCAAATATTTCTGTGCTTACACCAACAATCATCGGACTGGTGCAA
AGAATCGGCTTCTTTATCTCACTTATCTTGCTTTGTGTAAGCAGCTTCAGCCCTCCAACAGACTCTTCCATCGCTGA
Protein sequenceShow/hide protein sequence
MENTNQSYEGLDLELSLRLPPPPPPPPPPQQPPEHPRRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNR
DTMHERAPSSWVDSVLPDCELCGEEKCVEPVIPENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLFHR