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Lcy05g014080 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g014080
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionrRNA intron-encoded homing endonuclease, putative
Genome locationChr05:17171222..17171757
RNA-Seq ExpressionLcy05g014080
SyntenyLcy05g014080
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TKS01550.1 hypothetical protein D5086_0000171890 [Populus alba]4.3e-5190.16Show/hide
Query:  VSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGS
        V  GRLVPS GDALLALTG+    DFDPI+LAFGIGVMINRD+RGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVA RTPPAPYEKSK LGSGGS
Subjt:  VSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGS

Query:  MVARLKLKGIDGRAPPGVEPAA
        MVARLKLKGIDGRAPPGVEPAA
Subjt:  MVARLKLKGIDGRAPPGVEPAA

TKS01553.1 hypothetical protein D5086_0000171920 [Populus alba]4.3e-5190.16Show/hide
Query:  VSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGS
        V  GRLVPS GDALLALTG+    DFDPI+LAFGIGVMINRD+RGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVA RTPPAPYEKSK LGSGGS
Subjt:  VSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGS

Query:  MVARLKLKGIDGRAPPGVEPAA
        MVARLKLKGIDGRAPPGVEPAA
Subjt:  MVARLKLKGIDGRAPPGVEPAA

TKS01561.1 hypothetical protein D5086_0000172000 [Populus alba]4.3e-5190.16Show/hide
Query:  VSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGS
        V  GRLVPS GDALLALTG+    DFDPI+LAFGIGVMINRD+RGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVA RTPPAPYEKSK LGSGGS
Subjt:  VSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGS

Query:  MVARLKLKGIDGRAPPGVEPAA
        MVARLKLKGIDGRAPPGVEPAA
Subjt:  MVARLKLKGIDGRAPPGVEPAA

TKS05961.1 hypothetical protein D5086_0000127890 [Populus alba]1.5e-5190.24Show/hide
Query:  MVSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGG
        MV  GRLVPS GDALLALTG+    DFDPI+LAFGIGVMINRD+RGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVA RTPPAPYEKSK LGSGG
Subjt:  MVSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGG

Query:  SMVARLKLKGIDGRAPPGVEPAA
        SMVARLKLKGIDGRAPPGVEPAA
Subjt:  SMVARLKLKGIDGRAPPGVEPAA

TKS17488.1 hypothetical protein D5086_0000013120 [Populus alba]4.3e-5190.16Show/hide
Query:  VSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGS
        V  GRLVPS GDALLALTG+    DFDPI+LAFGIGVMINRD+RGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVA RTPPAPYEKSK LGSGGS
Subjt:  VSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGS

Query:  MVARLKLKGIDGRAPPGVEPAA
        MVARLKLKGIDGRAPPGVEPAA
Subjt:  MVARLKLKGIDGRAPPGVEPAA

TrEMBL top hitse value%identityAlignment
A0A4U5PVM9 Retrotrans_gag domain-containing protein2.1e-5190.16Show/hide
Query:  VSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGS
        V  GRLVPS GDALLALTG+    DFDPI+LAFGIGVMINRD+RGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVA RTPPAPYEKSK LGSGGS
Subjt:  VSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGS

Query:  MVARLKLKGIDGRAPPGVEPAA
        MVARLKLKGIDGRAPPGVEPAA
Subjt:  MVARLKLKGIDGRAPPGVEPAA

A0A4U5PVW4 Uncharacterized protein2.1e-5190.16Show/hide
Query:  VSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGS
        V  GRLVPS GDALLALTG+    DFDPI+LAFGIGVMINRD+RGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVA RTPPAPYEKSK LGSGGS
Subjt:  VSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGS

Query:  MVARLKLKGIDGRAPPGVEPAA
        MVARLKLKGIDGRAPPGVEPAA
Subjt:  MVARLKLKGIDGRAPPGVEPAA

A0A4U5Q829 Retrotrans_gag domain-containing protein7.1e-5290.24Show/hide
Query:  MVSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGG
        MV  GRLVPS GDALLALTG+    DFDPI+LAFGIGVMINRD+RGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVA RTPPAPYEKSK LGSGG
Subjt:  MVSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGG

Query:  SMVARLKLKGIDGRAPPGVEPAA
        SMVARLKLKGIDGRAPPGVEPAA
Subjt:  SMVARLKLKGIDGRAPPGVEPAA

A0A4U5QPX7 Uncharacterized protein2.1e-5190.16Show/hide
Query:  VSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGS
        V  GRLVPS GDALLALTG+    DFDPI+LAFGIGVMINRD+RGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVA RTPPAPYEKSK LGSGGS
Subjt:  VSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGS

Query:  MVARLKLKGIDGRAPPGVEPAA
        MVARLKLKGIDGRAPPGVEPAA
Subjt:  MVARLKLKGIDGRAPPGVEPAA

A0A4U5R5A1 Uncharacterized protein2.1e-5190.16Show/hide
Query:  VSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGS
        V  GRLVPS GDALLALTG+    DFDPI+LAFGIGVMINRD+RGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVA RTPPAPYEKSK LGSGGS
Subjt:  VSIGRLVPSAGDALLALTGQ----DFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGS

Query:  MVARLKLKGIDGRAPPGVEPAA
        MVARLKLKGIDGRAPPGVEPAA
Subjt:  MVARLKLKGIDGRAPPGVEPAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGCATCGGTCGGCTCGTCCCTTCTGCCGGCGATGCGCTCCTGGCCTTAACTGGCCAGGATTTCGATCCTATTCTGTTGGCCTTCGGGATCGGAGTAATGATTAA
CAGGGACAATCGGGGGCATTCGTATTTCATAGTCAGAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGAT
TGGCGGATGTTGCTTTAAGGACTCCGCCAGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGG
GCACCACCAGGAGTGGAGCCTGCGGCTTCATTTGACTCAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGCATCGGTCGGCTCGTCCCTTCTGCCGGCGATGCGCTCCTGGCCTTAACTGGCCAGGATTTCGATCCTATTCTGTTGGCCTTCGGGATCGGAGTAATGATTAA
CAGGGACAATCGGGGGCATTCGTATTTCATAGTCAGAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGAT
TGGCGGATGTTGCTTTAAGGACTCCGCCAGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGG
GCACCACCAGGAGTGGAGCCTGCGGCTTCATTTGACTCAACATAG
Protein sequenceShow/hide protein sequence
MVSIGRLVPSAGDALLALTGQDFDPILLAFGIGVMINRDNRGHSYFIVRERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGIDGR
APPGVEPAASFDST