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Lcy05g014820 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g014820
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionSWIM-type domain-containing protein
Genome locationChr05:18262987..18264460
RNA-Seq ExpressionLcy05g014820
SyntenyLcy05g014820
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7140119.1 hypothetical protein RHSIM_Rhsim06G0115000 [Rhododendron simsii]6.8e-1138.6Show/hide
Query:  MYSFFLELVNGHNLWPKSNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKGLVARRRKQTRGGMTFMGFTIPNME
        +Y+  +   NG NLW ++ Y PI PP +R+P  RPR+QR+++ DE     + +  G T+ C KC   GHN R+CKG+V        GG  F    IP   
Subjt:  MYSFFLELVNGHNLWPKSNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKGLVARRRKQTRGGMTFMGFTIPNME

Query:  RDSSQQPQLSGATT
          SSQ P  S   T
Subjt:  RDSSQQPQLSGATT

KAF7840310.1 hypothetical protein G2W53_002608 [Senna tora]5.2e-1137.5Show/hide
Query:  MYSFFLELVNGHNLWPKSNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKGLVARRRKQTRGG
        +Y  +++  NG  +WP++  DP+ PP +++PP RP++QRK++ +E S     K     +RC+KC+ VGHN R+CKG  +++ K ++ G
Subjt:  MYSFFLELVNGHNLWPKSNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKGLVARRRKQTRGG

KAG8475439.1 hypothetical protein CXB51_032209 [Gossypium anomalum]4.0e-1141.32Show/hide
Query:  MYSFFLELVNGHNLW-PKSNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKGLVARR--RKQTRGGMTFMGFTIP
        +YS F+  V G   W P SN  PI PP +R+PP RP + ++++ DE  +++R    G  IRCSKCK VGHN RSCKG V +    K+ + G+       P
Subjt:  MYSFFLELVNGHNLW-PKSNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKGLVARR--RKQTRGGMTFMGFTIP

Query:  NMERDSSQQ----PQLSGATT
        N +  +S Q     QLS A T
Subjt:  NMERDSSQQ----PQLSGATT

KAG8481389.1 hypothetical protein CXB51_026139 [Gossypium anomalum]1.8e-1142.15Show/hide
Query:  MYSFFLELVNGHNLW-PKSNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKGLVARR--RKQTRGGMTFMGFTIP
        +YS F+  V G   W P SN  PI PP +R+PP RP + R+++ DE  +++R    G  IRCSKCK VGHN RSCKG V +    K+ + G+       P
Subjt:  MYSFFLELVNGHNLW-PKSNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKGLVARR--RKQTRGGMTFMGFTIP

Query:  NMERDSSQQ----PQLSGATT
        N +  +S Q     QLS A T
Subjt:  NMERDSSQQ----PQLSGATT

XP_020230608.1 uncharacterized protein LOC109811316 isoform X2 [Cajanus cajan]6.8e-1141.86Show/hide
Query:  YSFFLELVNGHNLWPKSNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKGLVARRRKQTRG
        YS      NG NLWP  + +PI+PP++R+ P RP++QRKR +DE  +  +      TI+C KC+  GHN R+CKG     R+  +G
Subjt:  YSFFLELVNGHNLWPKSNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKGLVARRRKQTRG

TrEMBL top hitse value%identityAlignment
A0A151SBM5 SWIM-type domain-containing protein3.3e-1141.86Show/hide
Query:  YSFFLELVNGHNLWPKSNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKGLVARRRKQTRG
        YS      NG NLWP  + +PI+PP++R+ P RP++QRKR +DE  +  +      TI+C KC+  GHN R+CKG     R+  +G
Subjt:  YSFFLELVNGHNLWPKSNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKGLVARRRKQTRG

A0A1U8KIG2 uncharacterized protein LOC1079173911.6e-1038.98Show/hide
Query:  MYSFFLELVNGHNLWPK-SNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKGLVARR---RKQTRGGMTFMGFTI
        +YS F+ LV G   W   SN  PI PP +R+P  RP + R+ + DE  +++R    G  IRC KCK VGHN RSCKG V +    ++   G +T    T 
Subjt:  MYSFFLELVNGHNLWPK-SNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKGLVARR---RKQTRGGMTFMGFTI

Query:  PNMERDSSQQPQLSGATT
           E   +QQ  L+   T
Subjt:  PNMERDSSQQPQLSGATT

A0A3Q7XS19 uncharacterized protein LOC1137866902.1e-1040.23Show/hide
Query:  YSFFLELVNGHNLWPKSNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKGLVARRRKQTRGG
        YS+ +   NG  LW  SN DPI PP++R+ P RP+++R +  DE+  S +      T++C  C  +GHN+R+CKG  A  R+  +GG
Subjt:  YSFFLELVNGHNLWPKSNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKGLVARRRKQTRGG

A0A3Q7YH69 uncharacterized protein LOC1137880952.1e-1040.23Show/hide
Query:  YSFFLELVNGHNLWPKSNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKGLVARRRKQTRGG
        YS+ +   NG  LW  SN DPI PP++R+ P RP+++R +  DE+  S +      T++C  C  +GHN+R+CKG  A  R+  +GG
Subjt:  YSFFLELVNGHNLWPKSNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKGLVARRRKQTRGG

A0A6P8DW92 uncharacterized protein LOC1162082721.6e-1043.42Show/hide
Query:  MYSFFLELVNGHNLWPKSNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKG
        +Y FF++   G   W KSN DP+QPP +++PP RP++QRK+  +E     + K     I C KC G  HN R+CKG
Subjt:  MYSFFLELVNGHNLWPKSNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTCATTCTTTTTAGAGCTTGTTAATGGACACAACTTATGGCCTAAATCGAATTATGACCCGATACAACCACCTATGATACGAAAACCGCCAAGGAGACCAAGACG
ACAAAGGAAGAGGGATGTGGATGAGGCTTCTTCTTCCCAACGATTTAAGCTTTGTGGACCTACTATTCGATGTAGTAAATGTAAAGGGGTAGGTCATAATTCTCGATCAT
GTAAAGGACTCGTGGCTAGGAGGAGGAAACAAACTAGAGGAGGAATGACTTTTATGGGATTCACAATCCCAAACATGGAGAGAGATTCTTCACAACAACCTCAACTTTCT
GGAGCTACGACAATATGA
mRNA sequenceShow/hide mRNA sequence
CTCTTTCTCTTTCCTTTTTGTCTTTTCCCATTCCAACTTTTCTTTCTCTTTCCTCACGTGAACCCTCCCTCCCTCTTCTTTCTTTTTTCTATTCTCTCTTTCTTCTTCAT
CCCATTTCCTCCTACCCGATTTCTTTCTCCCTCTCTTTTCTCCTTCCCTTTCTTTCTCATTCACTCCTTCTCATTCTCCGGCGTCGGCAGACTCGGCACACCAAGACTTC
GTTCGTTTTTTTTTCTTCTCTTTTTTCTTATTCTTCCTCACTAATCTCTCTTTCTTCTTCTTTCCCTCTCTTTCTCTTTTTCCTCTTTTTTCTTCCCTTCTTTTCTCCTC
TTCCTCATGCTTCAAACCCTCACAAAAACTTCCAAGAAAAAATCTCATCTCAAAGAAGAAAACCTCATCTCAAGTCACAAAACCGACAAAATCGACCGACCGACCGTGTT
TTTGGTCGGTCGGTTTCAGAGAGCGTTCAAAAACTTCCGGCCACCGACCGACTGAAACCGATAGGTCGGTTGTCGGCGTCGGTTTTTGCCCAAAACCGACTCCGACCGAC
CGACGAACACCCCTACTTGCCATCATGTTGTTCAATGTATCCTCTACTTGAAAAAACGACCCGAAGAATTTGTGGATGCTTACTACTCTAAAGAATCATTGGTGAAAATG
TATTCATTCTTTTTAGAGCTTGTTAATGGACACAACTTATGGCCTAAATCGAATTATGACCCGATACAACCACCTATGATACGAAAACCGCCAAGGAGACCAAGACGACA
AAGGAAGAGGGATGTGGATGAGGCTTCTTCTTCCCAACGATTTAAGCTTTGTGGACCTACTATTCGATGTAGTAAATGTAAAGGGGTAGGTCATAATTCTCGATCATGTA
AAGGACTCGTGGCTAGGAGGAGGAAACAAACTAGAGGAGGAATGACTTTTATGGGATTCACAATCCCAAACATGGAGAGAGATTCTTCACAACAACCTCAACTTTCTGGA
GCTACGACAATATGAGACCTTGACCCACAACTGCCTCAATCTTCGGGATCTATACATACACGACAAGAGTAGGCATCAACCATCAATTTTTGTCTCACAATCGACTCTCT
AACTTCTTCAGGATTGACAATGGTAGACATCAATCTCCAATTTCCATTTTTTGGAGGCTTCTTCAAGATGTGTTTTGTAGCAAGAGATGACATCTCTAAAAGTTTCTTCA
AATTGGACATTTGCACCGGATGCATTATGGATCTAAAAATTAATTTTGTAAAAGGATATTTTGTTAAAAGGAAACCTATTTTGTTGGTTTAAGAATTTTGGG
Protein sequenceShow/hide protein sequence
MYSFFLELVNGHNLWPKSNYDPIQPPMIRKPPRRPRRQRKRDVDEASSSQRFKLCGPTIRCSKCKGVGHNSRSCKGLVARRRKQTRGGMTFMGFTIPNMERDSSQQPQLS
GATTI