; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy05g015280 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g015280
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr05:19026924..19027700
RNA-Seq ExpressionLcy05g015280
SyntenyLcy05g015280
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022739.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-12186.1Show/hide
Query:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT
        M NLVMIRRRIWS KTFH AALTIFNAQ++V R PTTFNI+FQL Q C SS       F APEFYSLNKKMSYLIRTG+I EARELFDSIKHRNTITWNT
Subjt:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT

Query:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY
        MITGYVKRREMTKARQLFDEMP+RDIVSWN MLSGYISCGGRYIESG+NLFDK+P+RDCVSWNT++SGYAKNGMM++AEELF YM ERNVVSWNAMVSGY
Subjt:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY

Query:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA
        LMNGYVEKAIEFFK+MPERDSASLSALVSGLIQNEKLVEAERILL Y GSDGRG+LVHA
Subjt:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA

XP_022928152.1 pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X1 [Cucurbita moschata]3.6e-12185.71Show/hide
Query:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT
        M NLVMIRRRIWS KTFH AALTIFNAQ++V R PTTFNI+FQL Q C SS       FQAPEFYSLNK+MSYLIRTG+I EAR+LFDSIKHRNTITWNT
Subjt:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT

Query:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY
        MITGYVKRREMTKARQLFDEMP+RDIVSWN MLSGYISCGGRYIESG+NLFDK+P+RDCVSWNT++SGYAKNGMM++AEELF YM ERNVVSWNAMVSGY
Subjt:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY

Query:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA
        LMNGYVEKAIEFFK+MPERDSASLSALVSGLIQNEKLVEAERILL Y GSDGRG+LVHA
Subjt:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA

XP_022928153.1 pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X2 [Cucurbita moschata]3.6e-12185.71Show/hide
Query:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT
        M NLVMIRRRIWS KTFH AALTIFNAQ++V R PTTFNI+FQL Q C SS       FQAPEFYSLNK+MSYLIRTG+I EAR+LFDSIKHRNTITWNT
Subjt:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT

Query:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY
        MITGYVKRREMTKARQLFDEMP+RDIVSWN MLSGYISCGGRYIESG+NLFDK+P+RDCVSWNT++SGYAKNGMM++AEELF YM ERNVVSWNAMVSGY
Subjt:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY

Query:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA
        LMNGYVEKAIEFFK+MPERDSASLSALVSGLIQNEKLVEAERILL Y GSDGRG+LVHA
Subjt:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA

XP_022989277.1 pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X1 [Cucurbita maxima]1.1e-12085.33Show/hide
Query:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT
        M NLVMIRRRIWS KTFH AALTIFNAQQ+V R PTTF+I+FQL Q       S  ++FQAPEFYSLNKKMSYLIRTG+I EARELFDSIKHRNT+TWNT
Subjt:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT

Query:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY
        MITGYVKRREMTKARQLFDEMP+RDIVSWN MLSGYISCGGRYIESG+NLFDK+P+RDCVSWNT++SGYAKNGMM++AEELF YM ERNVVSWNAMVSGY
Subjt:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY

Query:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA
        LMNGYVEKAIEFFK+MPERDSASLSALVSGLIQNEKLVEAERILL Y GSDGRG+LVHA
Subjt:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA

XP_022989279.1 pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X3 [Cucurbita maxima]1.1e-12085.33Show/hide
Query:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT
        M NLVMIRRRIWS KTFH AALTIFNAQQ+V R PTTF+I+FQL Q       S  ++FQAPEFYSLNKKMSYLIRTG+I EARELFDSIKHRNT+TWNT
Subjt:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT

Query:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY
        MITGYVKRREMTKARQLFDEMP+RDIVSWN MLSGYISCGGRYIESG+NLFDK+P+RDCVSWNT++SGYAKNGMM++AEELF YM ERNVVSWNAMVSGY
Subjt:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY

Query:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA
        LMNGYVEKAIEFFK+MPERDSASLSALVSGLIQNEKLVEAERILL Y GSDGRG+LVHA
Subjt:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA

TrEMBL top hitse value%identityAlignment
A0A5D3DJ38 Pentatricopeptide repeat-containing protein7.2e-11580.69Show/hide
Query:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT
        M+NLVM+RRRIWS KTFHAAALT+FNAQQH  R P  FNIAFQ  Q C   SSS+AN+FQ PEFYSL+KK+SYLIRTGRI+EAR LFDSIKH NTITWN 
Subjt:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT

Query:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY
        MIT YVKRREM KARQLFDEMPNRDIVSWN MLSGYISCGG++IE  +N+FD++PE DCVSWNT+LSGYAK+GMMDKAEELFN M ERNVVSWNAMVSGY
Subjt:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY

Query:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA
        LMNGYVEKAIEFFK+MP+RDSASL ALVSGLIQN+KLVEAERIL  Y G+DG+GDLV A
Subjt:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA

A0A6J1EJ37 pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X11.8e-12185.71Show/hide
Query:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT
        M NLVMIRRRIWS KTFH AALTIFNAQ++V R PTTFNI+FQL Q C SS       FQAPEFYSLNK+MSYLIRTG+I EAR+LFDSIKHRNTITWNT
Subjt:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT

Query:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY
        MITGYVKRREMTKARQLFDEMP+RDIVSWN MLSGYISCGGRYIESG+NLFDK+P+RDCVSWNT++SGYAKNGMM++AEELF YM ERNVVSWNAMVSGY
Subjt:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY

Query:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA
        LMNGYVEKAIEFFK+MPERDSASLSALVSGLIQNEKLVEAERILL Y GSDGRG+LVHA
Subjt:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA

A0A6J1EN32 pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X21.8e-12185.71Show/hide
Query:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT
        M NLVMIRRRIWS KTFH AALTIFNAQ++V R PTTFNI+FQL Q C SS       FQAPEFYSLNK+MSYLIRTG+I EAR+LFDSIKHRNTITWNT
Subjt:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT

Query:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY
        MITGYVKRREMTKARQLFDEMP+RDIVSWN MLSGYISCGGRYIESG+NLFDK+P+RDCVSWNT++SGYAKNGMM++AEELF YM ERNVVSWNAMVSGY
Subjt:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY

Query:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA
        LMNGYVEKAIEFFK+MPERDSASLSALVSGLIQNEKLVEAERILL Y GSDGRG+LVHA
Subjt:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA

A0A6J1JFD5 pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X15.1e-12185.33Show/hide
Query:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT
        M NLVMIRRRIWS KTFH AALTIFNAQQ+V R PTTF+I+FQL Q       S  ++FQAPEFYSLNKKMSYLIRTG+I EARELFDSIKHRNT+TWNT
Subjt:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT

Query:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY
        MITGYVKRREMTKARQLFDEMP+RDIVSWN MLSGYISCGGRYIESG+NLFDK+P+RDCVSWNT++SGYAKNGMM++AEELF YM ERNVVSWNAMVSGY
Subjt:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY

Query:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA
        LMNGYVEKAIEFFK+MPERDSASLSALVSGLIQNEKLVEAERILL Y GSDGRG+LVHA
Subjt:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA

A0A6J1JNX0 pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X35.1e-12185.33Show/hide
Query:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT
        M NLVMIRRRIWS KTFH AALTIFNAQQ+V R PTTF+I+FQL Q       S  ++FQAPEFYSLNKKMSYLIRTG+I EARELFDSIKHRNT+TWNT
Subjt:  MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNT

Query:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY
        MITGYVKRREMTKARQLFDEMP+RDIVSWN MLSGYISCGGRYIESG+NLFDK+P+RDCVSWNT++SGYAKNGMM++AEELF YM ERNVVSWNAMVSGY
Subjt:  MITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGY

Query:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA
        LMNGYVEKAIEFFK+MPERDSASLSALVSGLIQNEKLVEAERILL Y GSDGRG+LVHA
Subjt:  LMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA

SwissProt top hitse value%identityAlignment
O04590 Pentatricopeptide repeat-containing protein At1g62260, mitochondrial3.5e-5852.56Show/hide
Query:  CCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGG-RYIE
        C  S S+S +++     F + NK+++ +IR+G I+EAR++F+ ++ RNT+TWNTMI+GYVKRREM +AR+LFD MP RD+V+WN M+SGY+SCGG R++E
Subjt:  CCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGG-RYIE

Query:  SGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILL
          + LFD++P RD  SWNT++SGYAKN  + +A  LF  M ERN VSW+AM++G+  NG V+ A+  F+ MP +DS+ L ALV+GLI+NE+L EA  +L 
Subjt:  SGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILL

Query:  HY-SGSDGRGDLVHA
         Y S   GR DLV+A
Subjt:  HY-SGSDGRGDLVHA

O64766 Pentatricopeptide repeat-containing protein At2g35030, mitochondrial1.9e-4044.38Show/hide
Query:  MSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIVSWNMLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAK
        +S  +R+ ++S A  LF  +  RN ++WNTMI GY +   + KA +LFDEMP R+IVSWN +   +   GR I+   NLF+++P RD VSW  ++ G AK
Subjt:  MSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIVSWNMLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAK

Query:  NGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEA
        NG +D+A  LF+ M ERN++SWNAM++GY  N  +++A + F++MPERD AS + +++G I+N ++ +A
Subjt:  NGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEA

Q56XI1 Pentatricopeptide repeat-containing protein At1g09410, mitochondrial3.8e-3639.77Show/hide
Query:  NKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILS
        N ++++L R G+I EAR+LFDS   ++  +WN+M+ GY        AR+LFDEMP+R+I+SWN ++SGY+  G   I+  + +FD +PER+ VSW  ++ 
Subjt:  NKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILS

Query:  GYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERI
        GY  NG +D AE LF  M E+N VSW  M+ G+L +G ++ A + ++++P++D+ + ++++ GL +  ++ EA  I
Subjt:  GYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERI

Q9M4P3 Pentatricopeptide repeat-containing protein At4g16835, mitochondrial6.4e-3639.81Show/hide
Query:  LNQCCPSSSSS-------RANNFQAP----EFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVK-RREMTKARQLFDEMPNRDIVSWNM
        L + C SSS S       R++    P    + + LNK ++  +R+G I  A  +F  ++ +NTITWN+++ G  K    M +A QLFDE+P  D  S+N+
Subjt:  LNQCCPSSSSS-------RANNFQAP----EFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVK-RREMTKARQLFDEMPNRDIVSWNM

Query:  LSGYISCGGRYI--ESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSG
        +   +SC  R +  E  Q+ FD++P +D  SWNT+++GYA+ G M+KA ELF  M E+N VSWNAM+SGY+  G +EKA  FFK+ P R   + +A+++G
Subjt:  LSGYISCGGRYI--ESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSG

Query:  LIQNEKLVEAE
         ++ +K+  AE
Subjt:  LIQNEKLVEAE

Q9SY02 Pentatricopeptide repeat-containing protein At4g027505.2e-3841.49Show/hide
Query:  SLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTI
        S N  +   ++  +I EAR+ FDS+  R+ ++WNT+ITGY +  ++ +ARQLFDE P +D+ +W  M+SGYI    R +E  + LFDK+PER+ VSWN +
Subjt:  SLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTI

Query:  LSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGR
        L+GY +   M+ A+ELF+ M  RNV +WN M++GY   G + +A   F  MP+RD  S +A+++G  Q+    EA R+ +      GR
Subjt:  LSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGR

Arabidopsis top hitse value%identityAlignment
AT1G09410.1 pentatricopeptide (PPR) repeat-containing protein2.7e-3739.77Show/hide
Query:  NKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILS
        N ++++L R G+I EAR+LFDS   ++  +WN+M+ GY        AR+LFDEMP+R+I+SWN ++SGY+  G   I+  + +FD +PER+ VSW  ++ 
Subjt:  NKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILS

Query:  GYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERI
        GY  NG +D AE LF  M E+N VSW  M+ G+L +G ++ A + ++++P++D+ + ++++ GL +  ++ EA  I
Subjt:  GYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERI

AT1G62260.1 mitochondrial editing factor 92.5e-5952.56Show/hide
Query:  CCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGG-RYIE
        C  S S+S +++     F + NK+++ +IR+G I+EAR++F+ ++ RNT+TWNTMI+GYVKRREM +AR+LFD MP RD+V+WN M+SGY+SCGG R++E
Subjt:  CCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGG-RYIE

Query:  SGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILL
          + LFD++P RD  SWNT++SGYAKN  + +A  LF  M ERN VSW+AM++G+  NG V+ A+  F+ MP +DS+ L ALV+GLI+NE+L EA  +L 
Subjt:  SGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILL

Query:  HY-SGSDGRGDLVHA
         Y S   GR DLV+A
Subjt:  HY-SGSDGRGDLVHA

AT2G35030.1 Pentatricopeptide repeat (PPR) superfamily protein1.4e-4144.38Show/hide
Query:  MSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIVSWNMLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAK
        +S  +R+ ++S A  LF  +  RN ++WNTMI GY +   + KA +LFDEMP R+IVSWN +   +   GR I+   NLF+++P RD VSW  ++ G AK
Subjt:  MSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIVSWNMLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAK

Query:  NGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEA
        NG +D+A  LF+ M ERN++SWNAM++GY  N  +++A + F++MPERD AS + +++G I+N ++ +A
Subjt:  NGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEA

AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.7e-3941.49Show/hide
Query:  SLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTI
        S N  +   ++  +I EAR+ FDS+  R+ ++WNT+ITGY +  ++ +ARQLFDE P +D+ +W  M+SGYI    R +E  + LFDK+PER+ VSWN +
Subjt:  SLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTI

Query:  LSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGR
        L+GY +   M+ A+ELF+ M  RNV +WN M++GY   G + +A   F  MP+RD  S +A+++G  Q+    EA R+ +      GR
Subjt:  LSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILLHYSGSDGR

AT4G16835.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.5e-3739.81Show/hide
Query:  LNQCCPSSSSS-------RANNFQAP----EFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVK-RREMTKARQLFDEMPNRDIVSWNM
        L + C SSS S       R++    P    + + LNK ++  +R+G I  A  +F  ++ +NTITWN+++ G  K    M +A QLFDE+P  D  S+N+
Subjt:  LNQCCPSSSSS-------RANNFQAP----EFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVK-RREMTKARQLFDEMPNRDIVSWNM

Query:  LSGYISCGGRYI--ESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSG
        +   +SC  R +  E  Q+ FD++P +D  SWNT+++GYA+ G M+KA ELF  M E+N VSWNAM+SGY+  G +EKA  FFK+ P R   + +A+++G
Subjt:  LSGYISCGGRYI--ESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSG

Query:  LIQNEKLVEAE
         ++ +K+  AE
Subjt:  LIQNEKLVEAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATTTGGTGATGATTCGCCGAAGAATATGGTCAATGAAGACCTTTCACGCAGCTGCTTTAACAATCTTCAATGCTCAGCAGCATGTTCATCGTAGTCCAACTAC
GTTCAACATTGCTTTTCAGTTAAACCAGTGTTGTCCATCTTCTTCTTCTTCGAGAGCCAACAATTTTCAGGCTCCGGAATTTTATTCTCTGAACAAGAAAATGTCTTATT
TGATTCGAACAGGCCGAATAAGTGAAGCGAGGGAATTGTTCGATAGCATTAAGCATCGAAATACGATCACTTGGAATACAATGATCACTGGGTACGTTAAAAGGAGAGAG
ATGACGAAAGCACGCCAGTTGTTTGACGAAATGCCTAATAGAGACATTGTGTCGTGGAACATGTTATCAGGTTACATATCGTGTGGTGGAAGGTACATTGAGAGCGGGCA
GAATTTGTTCGATAAAATACCTGAAAGAGATTGTGTTTCATGGAACACGATTTTAAGTGGGTATGCTAAGAATGGGATGATGGATAAAGCAGAAGAGCTTTTCAATTACA
TGCATGAGCGTAATGTTGTCTCATGGAATGCCATGGTTTCTGGTTATTTGATGAATGGTTATGTGGAGAAAGCTATTGAGTTCTTTAAGATCATGCCAGAACGAGACTCT
GCTTCTCTTAGTGCACTGGTTTCTGGTCTGATTCAGAATGAGAAGTTGGTTGAAGCTGAAAGGATTCTGCTTCATTACAGTGGGAGTGATGGTAGAGGGGATTTAGTTCA
TGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATTTGGTGATGATTCGCCGAAGAATATGGTCAATGAAGACCTTTCACGCAGCTGCTTTAACAATCTTCAATGCTCAGCAGCATGTTCATCGTAGTCCAACTAC
GTTCAACATTGCTTTTCAGTTAAACCAGTGTTGTCCATCTTCTTCTTCTTCGAGAGCCAACAATTTTCAGGCTCCGGAATTTTATTCTCTGAACAAGAAAATGTCTTATT
TGATTCGAACAGGCCGAATAAGTGAAGCGAGGGAATTGTTCGATAGCATTAAGCATCGAAATACGATCACTTGGAATACAATGATCACTGGGTACGTTAAAAGGAGAGAG
ATGACGAAAGCACGCCAGTTGTTTGACGAAATGCCTAATAGAGACATTGTGTCGTGGAACATGTTATCAGGTTACATATCGTGTGGTGGAAGGTACATTGAGAGCGGGCA
GAATTTGTTCGATAAAATACCTGAAAGAGATTGTGTTTCATGGAACACGATTTTAAGTGGGTATGCTAAGAATGGGATGATGGATAAAGCAGAAGAGCTTTTCAATTACA
TGCATGAGCGTAATGTTGTCTCATGGAATGCCATGGTTTCTGGTTATTTGATGAATGGTTATGTGGAGAAAGCTATTGAGTTCTTTAAGATCATGCCAGAACGAGACTCT
GCTTCTCTTAGTGCACTGGTTTCTGGTCTGATTCAGAATGAGAAGTTGGTTGAAGCTGAAAGGATTCTGCTTCATTACAGTGGGAGTGATGGTAGAGGGGATTTAGTTCA
TGCTTAA
Protein sequenceShow/hide protein sequence
MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRRE
MTKARQLFDEMPNRDIVSWNMLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDS
ASLSALVSGLIQNEKLVEAERILLHYSGSDGRGDLVHA