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Lcy05g015720 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g015720
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNase H domain-containing protein
Genome locationChr05:20274502..20275462
RNA-Seq ExpressionLcy05g015720
SyntenyLcy05g015720
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG47194.1 hypothetical protein EZV62_026488 [Acer yangbiense]4.4e-2032.16Show/hide
Query:  PGSFVVAYIHSF-RAIRLSGRVERSAVSGSSPVPDQRVRWMPPSDGWLKLNTDAAFHIDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILL
        P + VV +   F +  R S    +  +    PVP    +W+ P  G  K+NTDAA ++  +    G ++R+  GQVML +     + +S  +AE  A+L 
Subjt:  PGSFVVAYIHSF-RAIRLSGRVERSAVSGSSPVPDQRVRWMPPSDGWLKLNTDAAFHIDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILL

Query:  GVQQTVNHGFLRLQIESDALGVIRSLFKEIEDISEVGVLVQAVHQLLQNGNFGGAFFTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLVFWDSP
        G++     GF    +ESDAL V++ + +     S+VG+++  +    ++ NF      PR  N+VAH LA+L + +L   VW G+CP  V +LV  D P
Subjt:  GVQQTVNHGFLRLQIESDALGVIRSLFKEIEDISEVGVLVQAVHQLLQNGNFGGAFFTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLVFWDSP

TXG57364.1 hypothetical protein EZV62_018677 [Acer yangbiense]2.4e-1836.97Show/hide
Query:  QRVRWMPPSDGWLKLNTDAAFHIDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILLGVQQTVNHGFLRLQIESDALGVIRSLFKEIEDISE
        +R +W  P  G  KLNTDAA       V  G I+RD TG VM  +  P  +  +   AE  AI  G+   V  GFL L +ESDA GV+  + K +   +E
Subjt:  QRVRWMPPSDGWLKLNTDAAFHIDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILLGVQQTVNHGFLRLQIESDALGVIRSLFKEIEDISE

Query:  VGVLVQAVHQLLQNGNFG-GAFFTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLVFWDSP
         GV++  +  L+ +        F+ R+ N VAH+LA L   +  S  W+  CP QV SLV  + P
Subjt:  VGVLVQAVHQLLQNGNFG-GAFFTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLVFWDSP

TXG72479.1 hypothetical protein EZV62_001058 [Acer yangbiense]2.6e-2035.71Show/hide
Query:  RLSGRVERSAVSGSSPVPDQRVRWMPPSDGWLKLNTDAAFHIDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILLGVQQTVNHGFLRLQIE
        R++  VE       SP P    +W PP  G  K+N+DAA          GC++RDS G V          C+   +AE  AIL G +     G L   +E
Subjt:  RLSGRVERSAVSGSSPVPDQRVRWMPPSDGWLKLNTDAAFHIDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILLGVQQTVNHGFLRLQIE

Query:  SDALGVIRSLFKEIEDISEVGVLVQAVHQLLQNGNFGGAFFTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLVFWDS
        SDAL V+ ++  +   +SEVGV++Q + ++  +       F PR  N+V H LA+L VG +   VWV +CP  V SLV  DS
Subjt:  SDALGVIRSLFKEIEDISEVGVLVQAVHQLLQNGNFGGAFFTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLVFWDS

XP_021747921.1 uncharacterized protein LOC110713786 [Chenopodium quinoa]3.3e-2032.97Show/hide
Query:  RLSGRVERSAVSGSSPVPDQRVRWMPPSDGWLKLNTDAAFH--IDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILLGVQQTVNHGFLRLQ
        ++ G + +  V  SS     +  W PPS G LKLN D      + SS+   G +LRD+ G V+L AS+     W   + E  AILLGVQ   + G   ++
Subjt:  RLSGRVERSAVSGSSPVPDQRVRWMPPSDGWLKLNTDAAFH--IDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILLGVQQTVNHGFLRLQ

Query:  IESDALGVIRSLFKEIEDISEVGVLVQAVHQLLQNGNFGGAFFTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLVFWDSP
        +ESD LGV+ ++  ++   S + ++   ++  +++ +F    FT R+GN+VAH+LA        SRVW+   P+ +  L+ +D P
Subjt:  IESDALGVIRSLFKEIEDISEVGVLVQAVHQLLQNGNFGGAFFTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLVFWDSP

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]8.0e-2240.61Show/hide
Query:  PDQRVRWMPPSDGWLKLNTDAAFHIDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILLGVQQTVNHGFLRLQIESDALGVIRSLFKEIEDI
        P +   W PP+   LK+N DAAF  +S +   G I+RDSTG V L A   L     VD  EG+A+  G+   V  GF+R QIE+D+L +   L  +  D 
Subjt:  PDQRVRWMPPSDGWLKLNTDAAFHIDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILLGVQQTVNHGFLRLQIESDALGVIRSLFKEIEDI

Query:  SEVGVLVQAVHQLLQNGNFGGAF-FTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLVFWD
        SEVGVL   +   L +     +F FT R+GN  AH LAQL + S   ++WV E P ++SS++  D
Subjt:  SEVGVLVQAVHQLLQNGNFGGAF-FTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLVFWD

TrEMBL top hitse value%identityAlignment
A0A5C7GQX3 RNase H domain-containing protein2.1e-2032.16Show/hide
Query:  PGSFVVAYIHSF-RAIRLSGRVERSAVSGSSPVPDQRVRWMPPSDGWLKLNTDAAFHIDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILL
        P + VV +   F +  R S    +  +    PVP    +W+ P  G  K+NTDAA ++  +    G ++R+  GQVML +     + +S  +AE  A+L 
Subjt:  PGSFVVAYIHSF-RAIRLSGRVERSAVSGSSPVPDQRVRWMPPSDGWLKLNTDAAFHIDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILL

Query:  GVQQTVNHGFLRLQIESDALGVIRSLFKEIEDISEVGVLVQAVHQLLQNGNFGGAFFTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLVFWDSP
        G++     GF    +ESDAL V++ + +     S+VG+++  +    ++ NF      PR  N+VAH LA+L + +L   VW G+CP  V +LV  D P
Subjt:  GVQQTVNHGFLRLQIESDALGVIRSLFKEIEDISEVGVLVQAVHQLLQNGNFGGAFFTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLVFWDSP

A0A5C7GW84 RNase H domain-containing protein1.7e-1735.62Show/hide
Query:  KLNTDAAFHIDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILLGVQQTVNHGFLRLQIESDALGVIRSLFKEIEDISEVGVLVQAVHQLLQ
        K+NTDAA  I  + V    ++R+  G+VML       +C+S  +AE  A++ G++   N GF    +ESDAL V+R +  ++   SEVG+++  +    +
Subjt:  KLNTDAAFHIDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILLGVQQTVNHGFLRLQIESDALGVIRSLFKEIEDISEVGVLVQAVHQLLQ

Query:  NGNFGGAFFTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLV
          NF    + PR   +VAH LA+L +  L   VW G+CP  V +LV
Subjt:  NGNFGGAFFTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLV

A0A5C7HKD5 Uncharacterized protein1.2e-1836.97Show/hide
Query:  QRVRWMPPSDGWLKLNTDAAFHIDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILLGVQQTVNHGFLRLQIESDALGVIRSLFKEIEDISE
        +R +W  P  G  KLNTDAA       V  G I+RD TG VM  +  P  +  +   AE  AI  G+   V  GFL L +ESDA GV+  + K +   +E
Subjt:  QRVRWMPPSDGWLKLNTDAAFHIDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILLGVQQTVNHGFLRLQIESDALGVIRSLFKEIEDISE

Query:  VGVLVQAVHQLLQNGNFG-GAFFTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLVFWDSP
         GV++  +  L+ +        F+ R+ N VAH+LA L   +  S  W+  CP QV SLV  + P
Subjt:  VGVLVQAVHQLLQNGNFG-GAFFTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLVFWDSP

A0A5C7ITL2 RNase H domain-containing protein1.2e-2035.71Show/hide
Query:  RLSGRVERSAVSGSSPVPDQRVRWMPPSDGWLKLNTDAAFHIDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILLGVQQTVNHGFLRLQIE
        R++  VE       SP P    +W PP  G  K+N+DAA          GC++RDS G V          C+   +AE  AIL G +     G L   +E
Subjt:  RLSGRVERSAVSGSSPVPDQRVRWMPPSDGWLKLNTDAAFHIDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILLGVQQTVNHGFLRLQIE

Query:  SDALGVIRSLFKEIEDISEVGVLVQAVHQLLQNGNFGGAFFTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLVFWDS
        SDAL V+ ++  +   +SEVGV++Q + ++  +       F PR  N+V H LA+L VG +   VWV +CP  V SLV  DS
Subjt:  SDALGVIRSLFKEIEDISEVGVLVQAVHQLLQNGNFGGAFFTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLVFWDS

A0A6J1DBJ7 uncharacterized protein LOC1110189733.9e-2240.61Show/hide
Query:  PDQRVRWMPPSDGWLKLNTDAAFHIDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILLGVQQTVNHGFLRLQIESDALGVIRSLFKEIEDI
        P +   W PP+   LK+N DAAF  +S +   G I+RDSTG V L A   L     VD  EG+A+  G+   V  GF+R QIE+D+L +   L  +  D 
Subjt:  PDQRVRWMPPSDGWLKLNTDAAFHIDSSMVRSGCILRDSTGQVMLVASYPLPSCWSVDLAEGWAILLGVQQTVNHGFLRLQIESDALGVIRSLFKEIEDI

Query:  SEVGVLVQAVHQLLQNGNFGGAF-FTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLVFWD
        SEVGVL   +   L +     +F FT R+GN  AH LAQL + S   ++WV E P ++SS++  D
Subjt:  SEVGVLVQAVHQLLQNGNFGGAF-FTPRDGNRVAHKLAQLVVGSLESRVWVGECPAQVSSLVFWD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCAAGTGGTGAGACGATTCTGGCGTCAATCAGAATTTCAGGCCCTTCTTAGTATAAACTCGGTGGCTGATATCTTCTCTTTAGTTTGTAAGGATATGAACATCCT
TCAGGATCCGGGTTCTTTTGTCGTTGCCTATATCCATAGCTTTCGGGCTATTCGGTTGTCTGGGCGGGTGGAGAGGTCGGCGGTTAGTGGCTCATCTCCTGTTCCTGATC
AAAGGGTGCGGTGGATGCCTCCGTCGGATGGGTGGTTGAAGCTCAATACTGATGCGGCTTTCCATATTGATTCGAGCATGGTTAGGTCTGGATGTATTCTTCGGGATTCG
ACTGGTCAAGTGATGCTTGTTGCTTCGTATCCTCTTCCGAGTTGCTGGAGTGTTGATTTAGCGGAAGGCTGGGCTATCCTCCTGGGGGTTCAGCAGACAGTCAACCATGG
GTTTCTTCGTCTTCAGATTGAGTCGGATGCTCTTGGTGTGATTCGCTCTCTGTTCAAAGAGATTGAGGATATATCTGAGGTGGGGGTTTTGGTCCAAGCAGTTCATCAGT
TGCTGCAAAATGGAAATTTTGGAGGTGCTTTCTTTACACCTCGTGATGGTAATCGTGTGGCTCATAAATTGGCCCAGTTGGTTGTTGGGTCTTTAGAGAGTAGGGTATGG
GTTGGGGAATGTCCAGCTCAAGTGTCTTCTCTTGTTTTTTGGGATTCTCCTGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCCAAGTGGTGAGACGATTCTGGCGTCAATCAGAATTTCAGGCCCTTCTTAGTATAAACTCGGTGGCTGATATCTTCTCTTTAGTTTGTAAGGATATGAACATCCT
TCAGGATCCGGGTTCTTTTGTCGTTGCCTATATCCATAGCTTTCGGGCTATTCGGTTGTCTGGGCGGGTGGAGAGGTCGGCGGTTAGTGGCTCATCTCCTGTTCCTGATC
AAAGGGTGCGGTGGATGCCTCCGTCGGATGGGTGGTTGAAGCTCAATACTGATGCGGCTTTCCATATTGATTCGAGCATGGTTAGGTCTGGATGTATTCTTCGGGATTCG
ACTGGTCAAGTGATGCTTGTTGCTTCGTATCCTCTTCCGAGTTGCTGGAGTGTTGATTTAGCGGAAGGCTGGGCTATCCTCCTGGGGGTTCAGCAGACAGTCAACCATGG
GTTTCTTCGTCTTCAGATTGAGTCGGATGCTCTTGGTGTGATTCGCTCTCTGTTCAAAGAGATTGAGGATATATCTGAGGTGGGGGTTTTGGTCCAAGCAGTTCATCAGT
TGCTGCAAAATGGAAATTTTGGAGGTGCTTTCTTTACACCTCGTGATGGTAATCGTGTGGCTCATAAATTGGCCCAGTTGGTTGTTGGGTCTTTAGAGAGTAGGGTATGG
GTTGGGGAATGTCCAGCTCAAGTGTCTTCTCTTGTTTTTTGGGATTCTCCTGTGTAG
Protein sequenceShow/hide protein sequence
MFQVVRRFWRQSEFQALLSINSVADIFSLVCKDMNILQDPGSFVVAYIHSFRAIRLSGRVERSAVSGSSPVPDQRVRWMPPSDGWLKLNTDAAFHIDSSMVRSGCILRDS
TGQVMLVASYPLPSCWSVDLAEGWAILLGVQQTVNHGFLRLQIESDALGVIRSLFKEIEDISEVGVLVQAVHQLLQNGNFGGAFFTPRDGNRVAHKLAQLVVGSLESRVW
VGECPAQVSSLVFWDSPV