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Lcy05g015980 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g015980
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationChr05:21030879..21031872
RNA-Seq ExpressionLcy05g015980
SyntenyLcy05g015980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN65684.1 hypothetical protein Csa_019689 [Cucumis sativus]2.5e-1641.72Show/hide
Query:  MADYLRLMKSQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFNHSTSVNMVSNKGTQSQGNG
        M DYLR+MK+ +DNLGQA SP+  R LISQVLLGL+E  NPV+ +IQG+  +SW +MQ++LL+F+K L+ QN+QK   +   + ++NM  ++        
Subjt:  MADYLRLMKSQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFNHSTSVNMVSNKGTQSQGNG

Query:  RGWNYNNNNQRIQAPNNNQRGGASYNGGRGHKRGRGHKRGRGNYGYSNNRP
            ++ NN+      NN +G   + GG  + RG G  RGRG+     N+P
Subjt:  RGWNYNNNNQRIQAPNNNQRGGASYNGGRGHKRGRGHKRGRGNYGYSNNRP

TYK05754.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.2e-1545.59Show/hide
Query:  DYLRLMKSQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFNHSTSVNMVSNKGTQSQGNGRG
        DYLR+MK+ SD LGQA SPV  R  ISQ LLGL+E  NPV+A+IQG+  +SW +MQ+ELL F+K LE Q+ QK T +   +  VN+  N+ +        
Subjt:  DYLRLMKSQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFNHSTSVNMVSNKGTQSQGNGRG

Query:  WNYNNNNQRIQAPNNNQRGGASYNGGRGHKRGRGHK
          ++ NN+     NN+Q     +N GRG  +GRG+K
Subjt:  WNYNNNNQRIQAPNNNQRGGASYNGGRGHKRGRGHK

XP_038902267.1 probable serine/threonine-protein kinase roco9 [Benincasa hispida]7.2e-1649.26Show/hide
Query:  SQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFNH--STSVNMVSNKGTQSQGNGRGWNYNN
        S    + +  SPV  R LISQVLLGL+EE N +VA IQGR ++SW ++Q++LL+++K LE Q  QKT V FN   +TSVNM + K T           NN
Subjt:  SQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFNH--STSVNMVSNKGTQSQGNGRGWNYNN

Query:  NNQRIQAPNNNQRGGASYNGGRGHKRGRGHKRGRGN
        NN++  + NNNQ  G    GG GH RGRG  RGRGN
Subjt:  NNQRIQAPNNNQRGGASYNGGRGHKRGRGHKRGRGN

XP_038905161.1 uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida]1.3e-1749.66Show/hide
Query:  MADYLRLMKSQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFNH--STSVNMVSNKGTQSQG
        M +YL+ MK  +DNL QA SP+  R L+SQVLLGL+EE N +VAMIQGR ++SW +MQ+ELL++++ LE Q+ QKTTV FN   + SVNM          
Subjt:  MADYLRLMKSQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFNH--STSVNMVSNKGTQSQG

Query:  NGRGWNYNNNNQRIQAPNNNQRGGASYNGGRGHKRGRGHKRGRGN
        N R  N NN        ++NQ  G    GG GH RGRG  RGR N
Subjt:  NGRGWNYNNNNQRIQAPNNNQRGGASYNGGRGHKRGRGHKRGRGN

XP_038905164.1 uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida]1.3e-1749.66Show/hide
Query:  MADYLRLMKSQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFNH--STSVNMVSNKGTQSQG
        M +YL+ MK  +DNL QA SP+  R L+SQVLLGL+EE N +VAMIQGR ++SW +MQ+ELL++++ LE Q+ QKTTV FN   + SVNM          
Subjt:  MADYLRLMKSQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFNH--STSVNMVSNKGTQSQG

Query:  NGRGWNYNNNNQRIQAPNNNQRGGASYNGGRGHKRGRGHKRGRGN
        N R  N NN        ++NQ  G    GG GH RGRG  RGR N
Subjt:  NGRGWNYNNNNQRIQAPNNNQRGGASYNGGRGHKRGRGHKRGRGN

TrEMBL top hitse value%identityAlignment
A0A0A0LXB7 Uncharacterized protein1.2e-1641.72Show/hide
Query:  MADYLRLMKSQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFNHSTSVNMVSNKGTQSQGNG
        M DYLR+MK+ +DNLGQA SP+  R LISQVLLGL+E  NPV+ +IQG+  +SW +MQ++LL+F+K L+ QN+QK   +   + ++NM  ++        
Subjt:  MADYLRLMKSQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFNHSTSVNMVSNKGTQSQGNG

Query:  RGWNYNNNNQRIQAPNNNQRGGASYNGGRGHKRGRGHKRGRGNYGYSNNRP
            ++ NN+      NN +G   + GG  + RG G  RGRG+     N+P
Subjt:  RGWNYNNNNQRIQAPNNNQRGGASYNGGRGHKRGRGHKRGRGNYGYSNNRP

A0A5D3C373 Retrovirus-related Pol polyprotein from transposon TNT 1-945.9e-1645.59Show/hide
Query:  DYLRLMKSQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFNHSTSVNMVSNKGTQSQGNGRG
        DYLR+MK+ SD LGQA SPV  R  ISQ LLGL+E  NPV+A+IQG+  +SW +MQ+ELL F+K LE Q+ QK T +   +  VN+  N+ +        
Subjt:  DYLRLMKSQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFNHSTSVNMVSNKGTQSQGNGRG

Query:  WNYNNNNQRIQAPNNNQRGGASYNGGRGHKRGRGHK
          ++ NN+     NN+Q     +N GRG  +GRG+K
Subjt:  WNYNNNNQRIQAPNNNQRGGASYNGGRGHKRGRGHK

A0A5D3E3L7 Uncharacterized protein4.2e-1447.52Show/hide
Query:  MADYLRLMKSQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFNHSTSVNMVSNKGTQSQGNG
        M DYLR+MK  +DNLGQA SPV  R LISQVLLGL+E  NPV A+IQG+ ++SW +MQ+ELL+F+ ++E+   +  + +   +  V    N+G     NG
Subjt:  MADYLRLMKSQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFNHSTSVNMVSNKGTQSQGNG

Query:  R
        +
Subjt:  R

A0A6J1D5J0 uncharacterized protein LOC1110175011.6e-1357.83Show/hide
Query:  MADYLRLMKSQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFNHS
        M D+LR+MKS +DNLGQA SPV +R+LISQVLLGL+EE NPVVA IQG+  +SW EMQAE        + QN Q +   FN++
Subjt:  MADYLRLMKSQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFNHS

A0A6J1DCW4 uncharacterized protein LOC1110195986.5e-1543.87Show/hide
Query:  MADYLRLMKSQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFN--HSTSVNMVSNKGTQSQG
        M +YL+LMKS +DNL  A S V+ R+L+SQVL GL+EE NP+V  +QG+ NLSWSEM AELL ++K LE QN+ K+ +  N   + SVN V  +  Q+  
Subjt:  MADYLRLMKSQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFN--HSTSVNMVSNKGTQSQG

Query:  NGRGWNYNNNNQRIQAPNNNQRGGASYNGGRGHK-RGRG-HKRGRGNYGYSNNRP
             N   NN      +N  RGG    G  G + RGRG       N+  SN+ P
Subjt:  NGRGWNYNNNNQRIQAPNNNQRGGASYNGGRGHK-RGRG-HKRGRGNYGYSNNRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATTATTTGAGACTAATGAAATCTCAATCTGATAATTTAGGGCAAGCTAGGAGTCCAGTGACCTCAAGGAATCTGATATCTCAAGTGCTATTGGGTCTCAACGA
AGAAAATAACCCAGTTGTCGCTATGATTCAAGGAAGAGGAAATCTGTCATGGTCAGAAATGCAGGCTGAGCTCCTTGTTTTCAAGAAAATGTTGGAATTACAAAATGCTC
AGAAAACCACCGTGTCCTTCAATCACTCGACTTCAGTGAACATGGTAAGCAATAAAGGAACTCAAAGTCAAGGAAATGGGAGAGGATGGAACTACAACAACAATAATCAG
AGAATTCAAGCTCCAAACAACAATCAAAGAGGAGGAGCTAGTTACAATGGAGGCAGAGGCCACAAACGTGGCAGAGGCCACAAACGTGGCAGAGGAAATTATGGATATTC
AAATAACCGACCACTTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATTATTTGAGACTAATGAAATCTCAATCTGATAATTTAGGGCAAGCTAGGAGTCCAGTGACCTCAAGGAATCTGATATCTCAAGTGCTATTGGGTCTCAACGA
AGAAAATAACCCAGTTGTCGCTATGATTCAAGGAAGAGGAAATCTGTCATGGTCAGAAATGCAGGCTGAGCTCCTTGTTTTCAAGAAAATGTTGGAATTACAAAATGCTC
AGAAAACCACCGTGTCCTTCAATCACTCGACTTCAGTGAACATGGTAAGCAATAAAGGAACTCAAAGTCAAGGAAATGGGAGAGGATGGAACTACAACAACAATAATCAG
AGAATTCAAGCTCCAAACAACAATCAAAGAGGAGGAGCTAGTTACAATGGAGGCAGAGGCCACAAACGTGGCAGAGGCCACAAACGTGGCAGAGGAAATTATGGATATTC
AAATAACCGACCACTTGATTAA
Protein sequenceShow/hide protein sequence
MADYLRLMKSQSDNLGQARSPVTSRNLISQVLLGLNEENNPVVAMIQGRGNLSWSEMQAELLVFKKMLELQNAQKTTVSFNHSTSVNMVSNKGTQSQGNGRGWNYNNNNQ
RIQAPNNNQRGGASYNGGRGHKRGRGHKRGRGNYGYSNNRPLD