; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy05g016030 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g016030
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr05:21418758..21420567
RNA-Seq ExpressionLcy05g016030
SyntenyLcy05g016030
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006487889.1 uncharacterized protein LOC102617714 [Citrus sinensis]1.4e-7641.32Show/hide
Query:  FNGIIRNGDLQSSGPQRDSNQISAFREVLDDCHLQDMGFSGNIFTWCNRRDSG---------------------------AQIQEAYGQPLPLDFSLIH-
        FN I  N + +  G +R+ +++  FR+ + DC L D+G  G  FTW NRR+                              Q+++   +   +  S  H 
Subjt:  FNGIIRNGDLQSSGPQRDSNQISAFREVLDDCHLQDMGFSGNIFTWCNRRDSG---------------------------AQIQEAYGQPLPLDFSLIH-

Query:  -------QLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLG
               + E+Q+D +L ++EI+WKQRSR DWLK GD+NTK+FH KAS RR++N I GI+DE G W  +   +  +F  +F  +F +T P+   +D    
Subjt:  -------QLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLG

Query:  DIPRKVTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQPRLVSDFRPISLC
        D   KV  EMN +L AP+  EE+  A+    PTKAPG DG PA F+QK+W  V    +  CL ILN +  +   NHT I LIPK+ +P+ VS+FRPISLC
Subjt:  DIPRKVTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQPRLVSDFRPISLC

Query:  NVVYKFVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLR
        NV+Y+ + K  AN LK IL  I+   QS F   R ITDN+IIG+E L+ I+  +  K G +ALKLD+SKAYDR EW++LR
Subjt:  NVVYKFVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLR

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.4e-7640.81Show/hide
Query:  DSNQISAFREVLDDCHLQDMGFSGNIFTWCNRRDSG----------------------------------------------------------------
        D++QI AFR ++D C L DMGF G IFTWCN R +G                                                                
Subjt:  DSNQISAFREVLDDCHLQDMGFSGNIFTWCNRRDSG----------------------------------------------------------------

Query:  --AQIQEAYGQPLPLDFSLIHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFK
          A I +AY QPLPLDF++IH LE+ L  LL  +EI+WKQRSREDWLKWG                                  +I+N +          
Subjt:  --AQIQEAYGQPLPLDFSLIHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFK

Query:  STCPSLGALDRVLGDIPRKVTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSR
                ++ ++  IP ++T E+N++LLAPYT+EE+E AI+   PTKA G DGFPALFYQ YW VVG KT++ CL  LN  + IK WN T I LIPK +
Subjt:  STCPSLGALDRVLGDIPRKVTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSR

Query:  QPRLVSDFRPISLCNVVYKFVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVL
        QPR +SDFRPISLCNV YK ++K   NRLK ++  +I + QS F P R+I+DN+IIGHE LH I + + G +G  ALKLD+SKA+DR EW+YL  ++
Subjt:  QPRLVSDFRPISLCNVVYKFVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVL

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]2.8e-7752.14Show/hide
Query:  IHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLGDIPRK
        I+ L  +++ LL  +EI W+QRSR  WL  GDRNTK+FH KAS RRRRN I+GI+DENG+WQ     I  +  SYFQ I+ S+ P+   +  VL  IP  
Subjt:  IHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLGDIPRK

Query:  VTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQPRLVSDFRPISLCNVVYK
        VT EMN  L+  +TREE+E A+    PTKAPG DG  A+F+QKYW++VG   V   L +LN    +   N TNI L+PK + P  +SDFRPISLCNVVYK
Subjt:  VTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQPRLVSDFRPISLCNVVYK

Query:  FVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVLDR
         ++KV ANRLK IL  II E QS F  GR ITDN+++  E +HY++++++GK GF A+KLDMSKAYDR EW ++++V+++
Subjt:  FVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVLDR

XP_024044510.1 uncharacterized protein LOC112100177 [Citrus clementina]5.3e-7644.71Show/hide
Query:  GPQRDSNQISAFREVLDDCHLQDMGFSGNIFTWCNRRDSGAQIQEAYGQPL-PLDFSLIHQ--LESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQ
        G ++  N+++ FR  L DC L D+G  G  FTW NRR     I+E   + L    +   +Q    S L +   +      + SR DWLK GDRNTK+FH 
Subjt:  GPQRDSNQISAFREVLDDCHLQDMGFSGNIFTWCNRRDSGAQIQEAYGQPL-PLDFSLIHQ--LESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQ

Query:  KASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLGDIPRKVTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALF
        KAS RR++N I GI DENG W  +  ++  +F  YF +IF ++ PS   L+  L  +P KV+ EMN +L   +T+EE+  A+    PTKAPG DG PA F
Subjt:  KASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLGDIPRKVTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALF

Query:  YQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQPRLVSDFRPISLCNVVYKFVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHE
        +QK+W  V    V  CL ILN    +   NHT I L+PK  +PR V++FRPI+LCNV+Y+ V K  ANRLK +L+DII   QS F P R ITDN+IIG+E
Subjt:  YQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQPRLVSDFRPISLCNVVYKFVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHE

Query:  TLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVLDR
         L+ I+  R  + G +A+KLD+SKAYDR EWS+++  + +
Subjt:  TLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVLDR

XP_030940247.1 uncharacterized protein LOC115965211 [Quercus lobata]4.8e-7739.26Show/hide
Query:  FNGIIRNGDLQSSGPQRDSNQISAFREVLDDCHLQDMGFSGNIFTWCNRRDSGAQIQEAYGQPLPLD--------FSL---------------IHQLESQ
        FN I+R+ + +  G  R   Q+  FRE+LD+C   D+GFSG  FTWC R   G  + E   + +           +S+               +H L+ +
Subjt:  FNGIIRNGDLQSSGPQRDSNQISAFREVLDDCHLQDMGFSGNIFTWCNRRDSGAQIQEAYGQPLPLD--------FSL---------------IHQLESQ

Query:  LDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLGDIPRKVTFEMNQ
        L  LL+++E  W+QRS+  WLK GD+NT++FH KAS R R+N I  + ++NG W      I  +F  Y+ ++F ++ PS   L  VL +IP+ V+  MN 
Subjt:  LDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLGDIPRKVTFEMNQ

Query:  RLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQPRLVSDFRPISLCNVVYKFVTKVFA
         L+ P+ ++EV+ A+K   P KAPG DG P +FYQ YWD +G       L+ LN      S NHT+I LIPK + P  VSDFRPISLCN++YK ++KV A
Subjt:  RLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQPRLVSDFRPISLCNVVYKFVTKVFA

Query:  NRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVL----------DRALCYVKFSTVSFYLRHI
        NRLK +L  ++ E QS F   ++ITDN+++  ETLH++K ++ GK GF+A+KLDMSKAY+R EW +L  ++          D  +  +K  + SF +   
Subjt:  NRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVL----------DRALCYVKFSTVSFYLRHI

Query:  HCAIL
         C  +
Subjt:  HCAIL

TrEMBL top hitse value%identityAlignment
A0A2N9GDB5 Reverse transcriptase domain-containing protein1.3e-7536.65Show/hide
Query:  FNGIIRNGDLQSSGPQRDSNQISAFREVLDDCHLQDMGFSGNIFTWCNRR--------------------------------------------------
        FN ++R  + Q S   R   Q+  FR+VLD+C L D+GFSG  FTW N R                                                  
Subjt:  FNGIIRNGDLQSSGPQRDSNQISAFREVLDDCHLQDMGFSGNIFTWCNRR--------------------------------------------------

Query:  -------------DSGAQ--IQEAYGQPLP-----------------LDFSLIHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRR
                     D G +  I+ ++   +P                  D   + QL+ +L  LL ++E  W+QRSR +WLK GD+NT++FH +A+ R+RR
Subjt:  -------------DSGAQ--IQEAYGQPLP-----------------LDFSLIHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRR

Query:  NFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLGDIPRKVTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVV
        N+I  + +  G W T+ S +  +F  ++  +F++  P    ++ V+ DI R VT EMN +L+  +T  EVE A+K   P KAPG DG P LFYQ+YW ++
Subjt:  NFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLGDIPRKVTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVV

Query:  GYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQPRLVSDFRPISLCNVVYKFVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNR
        G       L  LN  + +K+ NHT I LIPK + P  V +FRPISLCNV+YK ++K+ ANRLK IL  I+ E QS F PGR ITDN+++  ETLH+++++
Subjt:  GYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQPRLVSDFRPISLCNVVYKFVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNR

Query:  RKGKVGFVALKLDMSKAYDRGEWSYLREVLDRALCYVKFSTV
        + GK G +ALKLDMSKAYDR EW +L+ V+++   + K+ ++
Subjt:  RKGKVGFVALKLDMSKAYDRGEWSYLREVLDRALCYVKFSTV

A0A2N9GKW3 Reverse transcriptase domain-containing protein2.2e-7537.68Show/hide
Query:  FNGIIRNGDLQSSGPQRDSNQISAFREVLDDCHLQDMGFSGNIFTWCNRRD---SGAQIQEAYGQPLPL-------------------------------
        FN ++R  + +     R   Q+  FR+VLD+C   D+GF+G  FTW N R    +  ++  A   P+ L                               
Subjt:  FNGIIRNGDLQSSGPQRDSNQISAFREVLDDCHLQDMGFSGNIFTWCNRRD---SGAQIQEAYGQPLPL-------------------------------

Query:  --------------------DFSLIHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYF
                            D   + +L  +L +LL ++E  W+QRSR +WL+ GDRNT++FH +A+ R+RRN +  +   +G W T  + +  +F  Y+
Subjt:  --------------------DFSLIHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYF

Query:  QDIFKSTCPSLGALDRVLGDIPRKVTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVL
          IF++   +L  ++ V+ +IP+ VT EMN +L   YT  EV+ A+K   P K+PG DG P +FYQKYW ++G       L  LN  + +K+ NHT I L
Subjt:  QDIFKSTCPSLGALDRVLGDIPRKVTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVL

Query:  IPKSRQPRLVSDFRPISLCNVVYKFVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLRE
        IPK + P  V +FRPISLCNV+YK ++KV ANRLK +L  II E QS F PGR ITDN+++  ETLH+++++R G++G +A+KLDMSKAYDR EW YL+ 
Subjt:  IPKSRQPRLVSDFRPISLCNVVYKFVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLRE

Query:  VLDRALCYVKFSTV
        V+ +   + K+ T+
Subjt:  VLDRALCYVKFSTV

A0A2N9HB41 Uncharacterized protein2.6e-7650.72Show/hide
Query:  IHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLGDIPRK
        ++ +  +L TL+ ++EI+W+QRSR  WLK GD N+++FH+ AS RR+ N +HG+ D NG WQ++P ++  +   YFQ++F S+ PS   ++ V   +  +
Subjt:  IHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLGDIPRK

Query:  VTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQPRLVSDFRPISLCNVVYK
        V+ EMN  LLAP++ EEV +A+    P+KAPG DG  ALF+Q+YW++VG    D  L  LN    + S N TNIVLIPK + P  +S FRPISLCNV+YK
Subjt:  VTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQPRLVSDFRPISLCNVVYK

Query:  FVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVL
         ++KV  NR+K IL  II +CQS F PGR ITDN+II  E LHY+KN++ G+VG +A KLDMSKAYDR EW YLR +L
Subjt:  FVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVL

A0A2N9J109 Uncharacterized protein3.7e-7550.36Show/hide
Query:  IHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLGDIPRK
        IH L  ++  LL ++E  W+QRSR  WLK+GDRNT +FH +A+ R+RRN I G+ D +G W+TE   I  +  SYFQ IF ++ PS  ++D VL  +P  
Subjt:  IHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLGDIPRK

Query:  VTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQPRLVSDFRPISLCNVVYK
        VT  MN+ L  PYT  EVE A++   P  APG DG P +FYQ +W ++G   +   L+ LN  + ++S NHTNI LIPK + P  VS+FRPISLCNV+YK
Subjt:  VTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQPRLVSDFRPISLCNVVYK

Query:  FVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVLDR
         ++KV ANRLK IL  +I E QS F  GR ITDN+++  ETLH++++ R+GK G +ALKLDMSKAYDR EWS+L  ++ +
Subjt:  FVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVLDR

A0A6J1DX30 uncharacterized protein LOC1110248741.2e-7640.81Show/hide
Query:  DSNQISAFREVLDDCHLQDMGFSGNIFTWCNRRDSG----------------------------------------------------------------
        D++QI AFR ++D C L DMGF G IFTWCN R +G                                                                
Subjt:  DSNQISAFREVLDDCHLQDMGFSGNIFTWCNRRDSG----------------------------------------------------------------

Query:  --AQIQEAYGQPLPLDFSLIHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFK
          A I +AY QPLPLDF++IH LE+ L  LL  +EI+WKQRSREDWLKWG                                  +I+N +          
Subjt:  --AQIQEAYGQPLPLDFSLIHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFK

Query:  STCPSLGALDRVLGDIPRKVTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSR
                ++ ++  IP ++T E+N++LLAPYT+EE+E AI+   PTKA G DGFPALFYQ YW VVG KT++ CL  LN  + IK WN T I LIPK +
Subjt:  STCPSLGALDRVLGDIPRKVTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSR

Query:  QPRLVSDFRPISLCNVVYKFVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVL
        QPR +SDFRPISLCNV YK ++K   NRLK ++  +I + QS F P R+I+DN+IIGHE LH I + + G +G  ALKLD+SKA+DR EW+YL  ++
Subjt:  QPRLVSDFRPISLCNVVYKFVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVL

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein1.6e-1926.83Show/hide
Query:  IHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLG--DIP
        I ++ ++L  +  +K +     SR  + +  ++  +   +    +R +N I  I ++ G   T+P+ I      Y++ ++ +   +L  +D  L    +P
Subjt:  IHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLG--DIP

Query:  RKVTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQ----IKSWNHTNIVLIPK-SRQPRLVSDFRPIS
        R +  E  + L  P T  E+ A I      K+PG DGF A FYQ+Y +    + V   L +    E+      S+   +I+LIPK  R      +FRPIS
Subjt:  RKVTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQ----IKSWNHTNIVLIPK-SRQPRLVSDFRPIS

Query:  LCNVVYKFVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVLDR
        L N+  K + K+ ANR++  +  +I   Q GF PG     N+      + +I NR K K   V + +D  KA+D+ +  ++ + L++
Subjt:  LCNVVYKFVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVLDR

P08548 LINE-1 reverse transcriptase homolog7.6e-1724.58Show/hide
Query:  QEAYGQPLPLDFSLIHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPS
        +E +  P P     I ++ ++L+ +  ++ I    +S+  + +  ++  K        +R ++ I  I + N    T+PS I  +   Y++ ++     +
Subjt:  QEAYGQPLPLDFSLIHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPS

Query:  LGALDRVLG--DIPRKVTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQ----IKSWNHTNIVLIPK-
        L  +D+ L    +PR    E+ + L  P +  E+ + I+     K+PG DGF + FYQ + +    + V   L +    E+      ++   NI LIPK 
Subjt:  LGALDRVLG--DIPRKVTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQ----IKSWNHTNIVLIPK-

Query:  SRQPRLVSDFRPISLCNVVYKFVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVLD
         + P    ++RPISL N+  K + K+  NR++  +  II   Q GF PG     N+      + +I N+ K K   + L +D  KA+D  +  ++   L 
Subjt:  SRQPRLVSDFRPISLCNVVYKFVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVLD

Query:  R
        +
Subjt:  R

P11369 LINE-1 retrotransposable element ORF2 protein3.0e-2128.25Show/hide
Query:  DRNTKWFHQKASM-----------RRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLG--DIPRKVTFEMNQRLLAPYTREEV
        ++   WF +K +             R +  I+ I +E G   T+P  I     S+++ ++ +   +L  +D+ L    +P K+  +    L +P + +E+
Subjt:  DRNTKWFHQKASM-----------RRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLG--DIPRKVTFEMNQRLLAPYTREEV

Query:  EAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIK-----SWNHTNIVLIPK-SRQPRLVSDFRPISLCNVVYKFVTKVFANRLKF
        EA I      K+PG DGF A FYQ +      + +   L  L  + +++     S+    I LIPK  + P  + +FRPISL N+  K + K+ ANR++ 
Subjt:  EAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIK-----SWNHTNIVLIPK-SRQPRLVSDFRPISLCNVVYKFVTKVFANRLKF

Query:  ILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVLDRA
         +  II   Q GF PG     N+      +HYI N+ K K   + + LD  KA+D+ +  ++ +VL+R+
Subjt:  ILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVLDRA

P14381 Transposon TX1 uncharacterized 149 kDa protein5.2e-2630.83Show/hide
Query:  RSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLGDIPRKVTFEMNQRLLAPYTREEVEAA
        RSR   L   DR +++F+     +  R  I  +  E+G    +P  I     S++Q++F     S  A + +   +P  V+    +RL  P T +E+  A
Subjt:  RSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLGDIPRKVTFEMNQRLLAPYTREEVEAA

Query:  IKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQPRLVSDFRPISLCNVVYKFVTKVFANRLKFILSDIIDEC
        ++     K+PG DG    F+Q +WD +G              E   S     + L+PK    RL+ ++RP+SL +  YK V K  + RLK +L+++I   
Subjt:  IKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQPRLVSDFRPISLCNVVYKFVTKVFANRLKFILSDIIDEC

Query:  QSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYL
        QS   PGR+I DN+ +  + LH+   RR G +    L LD  KA+DR +  YL
Subjt:  QSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYL

Q95SX7 Probable RNA-directed DNA polymerase from transposon BS1.0e-0528.66Show/hide
Query:  LAPYTREEVEAAIKGFKPTKAPGFDGF--PALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQP-RLVSDFRPISLCNVVYKFVTKVF
        + P   EE+  AIK     K+PG D      L       ++    + N  AIL  +   K W    I++I K  +P      +RPISL + + K   ++ 
Subjt:  LAPYTREEVEAAIKGFKPTKAPGFDGF--PALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQP-RLVSDFRPISLCNVVYKFVTKVF

Query:  ANRLKFILSD--IIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDR
        ANRL  I+++  I+ + Q GF  G S  + +   H    +I      K    A+ +DM +A+DR
Subjt:  ANRLKFILSD--IIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDR

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein4.1e-1828.37Show/hide
Query:  FSLIHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSL--GALDRVLG
        F + H    + +      E +++Q+SR  WL+ GD NT++FH+     + +N I  +  ++       + +  M  +Y+  +  S    L   ++ R+  
Subjt:  FSLIHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKWFHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSL--GALDRVLG

Query:  DIPRKVTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQPRLVSDFRPISLC
          P +    +  RL A  + +E+ AA+      KAPG D F A F+ + W VV   T+            +K +N T I LIPK      +S FRP+S C
Subjt:  DIPRKVTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDVVGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQPRLVSDFRPISLC

Query:  NVVYKFVT
         VVYK +T
Subjt:  NVVYKFVT

AT4G20520.1 RNA binding;RNA-directed DNA polymerases2.2e-1144.29Show/hide
Query:  RLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVL
        RLK +++++I   Q+ F PGR  TDN++   E +H ++ R+KG  G++ LKLD+ KAYDR  W YL + L
Subjt:  RLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVALKLDMSKAYDRGEWSYLREVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGATATTCAATGGGATAATAAGAAATGGAGATTTACAGTCTAGTGGTCCTCAGAGGGATAGCAATCAAATTTCGGCCTTTAGGGAGGTGTTGGATGATTGTCATCT
TCAGGATATGGGGTTCTCTGGCAACATCTTTACATGGTGCAATAGACGTGATTCGGGAGCACAAATTCAAGAGGCCTATGGTCAACCTCTTCCTTTGGACTTTTCTCTAA
TCCACCAACTTGAATCTCAATTAGACACACTATTGGTGGAAAAAGAGATTTATTGGAAGCAGCGTTCGAGAGAAGACTGGCTGAAATGGGGGGATCGCAATACTAAATGG
TTCCACCAAAAAGCATCGATGCGTCGGAGGAGAAATTTTATTCATGGCATTGTAGATGAGAATGGTCATTGGCAGACAGAGCCTTCCATTATTAATGGTATGTTTGAATC
TTATTTTCAAGATATTTTTAAATCTACATGTCCTTCGTTGGGAGCTTTAGACAGGGTCCTTGGTGATATTCCAAGAAAAGTTACTTTTGAGATGAATCAAAGGTTGCTTG
CTCCCTATACTAGGGAGGAAGTTGAAGCGGCGATCAAAGGGTTTAAACCTACCAAGGCTCCTGGTTTTGATGGTTTTCCAGCCTTGTTCTATCAAAAATATTGGGATGTT
GTGGGTTACAAGACGGTGGACAACTGTTTGGCCATTCTGAATGGACGAGAACAGATCAAATCGTGGAATCATACCAATATCGTGCTCATTCCAAAATCCAGGCAACCTCG
GTTAGTCTCTGACTTTCGTCCTATTAGCCTTTGCAATGTGGTTTATAAATTTGTCACTAAGGTTTTTGCAAATAGATTGAAGTTCATTCTATCCGATATCATAGATGAGT
GTCAGTCGGGTTTTACTCCAGGTCGTTCCATAACTGATAATATGATTATTGGACATGAAACACTTCATTACATTAAGAACAGAAGGAAGGGGAAAGTTGGTTTTGTGGCT
CTTAAACTTGATATGAGTAAGGCATACGATAGAGGTGAATGGTCTTATCTTAGAGAGGTGTTGGATAGGGCTCTCTGCTATGTTAAATTCAGCACGGTCTCGTTCTATCT
CAGGCATATCCATTGCGCGATCCTGTCCAAGAATTACGCATTTGTTTTTCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGATATTCAATGGGATAATAAGAAATGGAGATTTACAGTCTAGTGGTCCTCAGAGGGATAGCAATCAAATTTCGGCCTTTAGGGAGGTGTTGGATGATTGTCATCT
TCAGGATATGGGGTTCTCTGGCAACATCTTTACATGGTGCAATAGACGTGATTCGGGAGCACAAATTCAAGAGGCCTATGGTCAACCTCTTCCTTTGGACTTTTCTCTAA
TCCACCAACTTGAATCTCAATTAGACACACTATTGGTGGAAAAAGAGATTTATTGGAAGCAGCGTTCGAGAGAAGACTGGCTGAAATGGGGGGATCGCAATACTAAATGG
TTCCACCAAAAAGCATCGATGCGTCGGAGGAGAAATTTTATTCATGGCATTGTAGATGAGAATGGTCATTGGCAGACAGAGCCTTCCATTATTAATGGTATGTTTGAATC
TTATTTTCAAGATATTTTTAAATCTACATGTCCTTCGTTGGGAGCTTTAGACAGGGTCCTTGGTGATATTCCAAGAAAAGTTACTTTTGAGATGAATCAAAGGTTGCTTG
CTCCCTATACTAGGGAGGAAGTTGAAGCGGCGATCAAAGGGTTTAAACCTACCAAGGCTCCTGGTTTTGATGGTTTTCCAGCCTTGTTCTATCAAAAATATTGGGATGTT
GTGGGTTACAAGACGGTGGACAACTGTTTGGCCATTCTGAATGGACGAGAACAGATCAAATCGTGGAATCATACCAATATCGTGCTCATTCCAAAATCCAGGCAACCTCG
GTTAGTCTCTGACTTTCGTCCTATTAGCCTTTGCAATGTGGTTTATAAATTTGTCACTAAGGTTTTTGCAAATAGATTGAAGTTCATTCTATCCGATATCATAGATGAGT
GTCAGTCGGGTTTTACTCCAGGTCGTTCCATAACTGATAATATGATTATTGGACATGAAACACTTCATTACATTAAGAACAGAAGGAAGGGGAAAGTTGGTTTTGTGGCT
CTTAAACTTGATATGAGTAAGGCATACGATAGAGGTGAATGGTCTTATCTTAGAGAGGTGTTGGATAGGGCTCTCTGCTATGTTAAATTCAGCACGGTCTCGTTCTATCT
CAGGCATATCCATTGCGCGATCCTGTCCAAGAATTACGCATTTGTTTTTCGCTGA
Protein sequenceShow/hide protein sequence
MLIFNGIIRNGDLQSSGPQRDSNQISAFREVLDDCHLQDMGFSGNIFTWCNRRDSGAQIQEAYGQPLPLDFSLIHQLESQLDTLLVEKEIYWKQRSREDWLKWGDRNTKW
FHQKASMRRRRNFIHGIVDENGHWQTEPSIINGMFESYFQDIFKSTCPSLGALDRVLGDIPRKVTFEMNQRLLAPYTREEVEAAIKGFKPTKAPGFDGFPALFYQKYWDV
VGYKTVDNCLAILNGREQIKSWNHTNIVLIPKSRQPRLVSDFRPISLCNVVYKFVTKVFANRLKFILSDIIDECQSGFTPGRSITDNMIIGHETLHYIKNRRKGKVGFVA
LKLDMSKAYDRGEWSYLREVLDRALCYVKFSTVSFYLRHIHCAILSKNYAFVFR