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Lcy05g016160 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g016160
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionproteoglycan 4
Genome locationChr05:21837185..21839791
RNA-Seq ExpressionLcy05g016160
SyntenyLcy05g016160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012971.1 Inactive protein RESTRICTED TEV MOVEMENT 2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-1251.72Show/hide
Query:  KAEEEAPTSTPAVVPPPVKSS---AEGGSDEAKTTPDEKISSPDQKLKEKKEIENQNREKGNESKTEEVGKNREEPKICTGSRLSGATGVGKLVGGYTVR
        KAEEEAPT  P  VPPP  +      G S + KTTPDEKI++P+QK  EK   ENQN EKG ESKTEEVGKN +  KI TG+    AT   K   G T  
Subjt:  KAEEEAPTSTPAVVPPPVKSS---AEGGSDEAKTTPDEKISSPDQKLKEKKEIENQNREKGNESKTEEVGKNREEPKICTGSRLSGATGVGKLVGGYTVR

Query:  RMILHITLQIQALLLT
        R IL +T  + A ++T
Subjt:  RMILHITLQIQALLLT

XP_022945513.1 proteoglycan 4 isoform X1 [Cucurbita moschata]8.5e-1249.14Show/hide
Query:  KAEEEAPTSTPAVVPPPVKSS---AEGGSDEAKTTPDEKISSPDQKLKEKKEIENQNREKGNESKTEEVGKNREEPKICTGSRLSGATGVGKLVGGYTVR
        KA EEAPT  P  VPPP  +      G S + KTTPDEKI +P+QK  EK   ENQN EKG ESKTE+VGKN +  KI TG+    AT   K   G+T  
Subjt:  KAEEEAPTSTPAVVPPPVKSS---AEGGSDEAKTTPDEKISSPDQKLKEKKEIENQNREKGNESKTEEVGKNREEPKICTGSRLSGATGVGKLVGGYTVR

Query:  RMILHITLQIQALLLT
        R +L +T  + A ++T
Subjt:  RMILHITLQIQALLLT

XP_022945514.1 proteoglycan 4 isoform X2 [Cucurbita moschata]8.5e-1249.14Show/hide
Query:  KAEEEAPTSTPAVVPPPVKSS---AEGGSDEAKTTPDEKISSPDQKLKEKKEIENQNREKGNESKTEEVGKNREEPKICTGSRLSGATGVGKLVGGYTVR
        KA EEAPT  P  VPPP  +      G S + KTTPDEKI +P+QK  EK   ENQN EKG ESKTE+VGKN +  KI TG+    AT   K   G+T  
Subjt:  KAEEEAPTSTPAVVPPPVKSS---AEGGSDEAKTTPDEKISSPDQKLKEKKEIENQNREKGNESKTEEVGKNREEPKICTGSRLSGATGVGKLVGGYTVR

Query:  RMILHITLQIQALLLT
        R +L +T  + A ++T
Subjt:  RMILHITLQIQALLLT

XP_022968176.1 proteoglycan 4 [Cucurbita maxima]1.0e-1250Show/hide
Query:  KAEEEAPTSTPAVVPPPVKSS---AEGGSDEAKTTPDEKISSPDQKLKEKKEIENQNREKGNESKTEEVGKNREEPKICTGSRLSGATGVGKLVGGYTVR
        KAEEEAPT  P  VPPP  +     +G S + KTTPDEKI +P+QK  EK   ENQN EKG ESKTE+VGKN +  KI TG+    AT   K   G+T  
Subjt:  KAEEEAPTSTPAVVPPPVKSS---AEGGSDEAKTTPDEKISSPDQKLKEKKEIENQNREKGNESKTEEVGKNREEPKICTGSRLSGATGVGKLVGGYTVR

Query:  RMILHITLQIQALLLT
        R +L +T  + A ++T
Subjt:  RMILHITLQIQALLLT

XP_038891748.1 protein RESTRICTED TEV MOVEMENT 2-like [Benincasa hispida]3.1e-1443.75Show/hide
Query:  DTGTTVEPADLSTVAIDFRQRRLRKTKAEEEAPTSTPAVVPPPV---KSSAEGGSDEAKTTPDEKISSPDQKLKEKKEIENQNREKGNESKTEEVGKNRE
        D   +V+P + +       Q++     A+EEAPT  P V P P    K   +G S +A+TT D+KISSPDQ     +EIENQ+ +KG +SK+EEV KN E
Subjt:  DTGTTVEPADLSTVAIDFRQRRLRKTKAEEEAPTSTPAVVPPPV---KSSAEGGSDEAKTTPDEKISSPDQKLKEKKEIENQNREKGNESKTEEVGKNRE

Query:  EPKICTGSRLSGATGVGKLVGGYTVRRMILHITLQIQALLLTAI
          KI TG+    AT VGKL GG+TVRR+ L  T+ + A +  A+
Subjt:  EPKICTGSRLSGATGVGKLVGGYTVRRMILHITLQIQALLLTAI

TrEMBL top hitse value%identityAlignment
A0A6J1DAL2 inactive protein RESTRICTED TEV MOVEMENT 25.5e-0940.79Show/hide
Query:  PAFETSEAVEHENSIVEPASVRSEAVDTGTTVEPADLSTVAIDFRQRRLRKTKAEEEAPTSTPAVVPPPVKSSAEGGSDEAKTT-PDEKISSPDQKLKEK
        P      A   E      A   +   D   +V+PAD          ++     A+EEAP    A      K  A+G S E KTT  DEKI SPD+K  EK
Subjt:  PAFETSEAVEHENSIVEPASVRSEAVDTGTTVEPADLSTVAIDFRQRRLRKTKAEEEAPTSTPAVVPPPVKSSAEGGSDEAKTT-PDEKISSPDQKLKEK

Query:  KEIENQNREKGNESKTEEVGKNREEPKICTGSRLSGATGVGKLVGGYTVRRM
        +EIENQN E+G ESKTEEV KN+EE K+ TG+     T   K   G TV RM
Subjt:  KEIENQNREKGNESKTEEVGKNREEPKICTGSRLSGATGVGKLVGGYTVRRM

A0A6J1G142 proteoglycan 4 isoform X14.1e-1249.14Show/hide
Query:  KAEEEAPTSTPAVVPPPVKSS---AEGGSDEAKTTPDEKISSPDQKLKEKKEIENQNREKGNESKTEEVGKNREEPKICTGSRLSGATGVGKLVGGYTVR
        KA EEAPT  P  VPPP  +      G S + KTTPDEKI +P+QK  EK   ENQN EKG ESKTE+VGKN +  KI TG+    AT   K   G+T  
Subjt:  KAEEEAPTSTPAVVPPPVKSS---AEGGSDEAKTTPDEKISSPDQKLKEKKEIENQNREKGNESKTEEVGKNREEPKICTGSRLSGATGVGKLVGGYTVR

Query:  RMILHITLQIQALLLT
        R +L +T  + A ++T
Subjt:  RMILHITLQIQALLLT

A0A6J1G164 proteoglycan 4 isoform X24.1e-1249.14Show/hide
Query:  KAEEEAPTSTPAVVPPPVKSS---AEGGSDEAKTTPDEKISSPDQKLKEKKEIENQNREKGNESKTEEVGKNREEPKICTGSRLSGATGVGKLVGGYTVR
        KA EEAPT  P  VPPP  +      G S + KTTPDEKI +P+QK  EK   ENQN EKG ESKTE+VGKN +  KI TG+    AT   K   G+T  
Subjt:  KAEEEAPTSTPAVVPPPVKSS---AEGGSDEAKTTPDEKISSPDQKLKEKKEIENQNREKGNESKTEEVGKNREEPKICTGSRLSGATGVGKLVGGYTVR

Query:  RMILHITLQIQALLLT
        R +L +T  + A ++T
Subjt:  RMILHITLQIQALLLT

A0A6J1GZF3 uncharacterized protein LOC1114586272.2e-1045.19Show/hide
Query:  PADLSTVAIDFRQRRLRKTKAEEEAPTSTPAVVPPPVKSSAEGGSDEAKTTPDEKISSPDQKL-KEKKEIENQNREKGNESKTEEVGKNREEPKICTGSR
        P D S+ + D  +    + +A  +A   TPA      +   +G S +A+TT D KISSPDQK   EKKEIENQN EKG ESKTEEV KN    KI   + 
Subjt:  PADLSTVAIDFRQRRLRKTKAEEEAPTSTPAVVPPPVKSSAEGGSDEAKTTPDEKISSPDQKL-KEKKEIENQNREKGNESKTEEVGKNREEPKICTGSR

Query:  LSGATGVGKLVGGYTVRRMILHITLQIQALLLTAI
            T VGKL GG+TV+RM L  T+ + A ++ A+
Subjt:  LSGATGVGKLVGGYTVRRMILHITLQIQALLLTAI

A0A6J1HU50 proteoglycan 44.8e-1350Show/hide
Query:  KAEEEAPTSTPAVVPPPVKSS---AEGGSDEAKTTPDEKISSPDQKLKEKKEIENQNREKGNESKTEEVGKNREEPKICTGSRLSGATGVGKLVGGYTVR
        KAEEEAPT  P  VPPP  +     +G S + KTTPDEKI +P+QK  EK   ENQN EKG ESKTE+VGKN +  KI TG+    AT   K   G+T  
Subjt:  KAEEEAPTSTPAVVPPPVKSS---AEGGSDEAKTTPDEKISSPDQKLKEKKEIENQNREKGNESKTEEVGKNREEPKICTGSRLSGATGVGKLVGGYTVR

Query:  RMILHITLQIQALLLT
        R +L +T  + A ++T
Subjt:  RMILHITLQIQALLLT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCTCCTGGCACCCTGGAATTATAGAATATTGGCATCTGGGCTGTTGGTGAGGGGGGGCACGGGATTCCTGTACTTGCTTGCCGTTCCAGCGTTCGAAACATCTGA
AGCCGTCGAGCACGAAAACTCCATCGTCGAGCCTGCAAGCGTCAGATCTGAAGCTGTCGACACTGGAACCACCGTGGAACCTGCCGATCTGTCCACTGTTGCCATCGATT
TCCGCCAGCGTCGTTTGAGGAAAACGAAGGCTGAGGAAGAAGCTCCGACGTCGACGCCAGCGGTGGTGCCACCACCTGTGAAGAGTTCGGCTGAAGGAGGTTCCGACGAG
GCTAAAACGACACCGGATGAGAAAATCAGCAGTCCAGATCAGAAACTAAAAGAGAAGAAAGAAATTGAAAATCAAAACAGAGAAAAGGGGAATGAATCTAAAACAGAGGA
GGTGGGTAAGAATCGAGAAGAGCCGAAGATCTGCACCGGAAGTCGATTGTCGGGAGCGACTGGAGTTGGAAAACTTGTCGGCGGCTACACAGTCAGAAGGATGATTCTTC
ACATAACTTTGCAGATCCAGGCACTCCTCCTGACGGCGATTCGAGGTCCAAATGCAAAACATACTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCCTCCTGGCACCCTGGAATTATAGAATATTGGCATCTGGGCTGTTGGTGAGGGGGGGCACGGGATTCCTGTACTTGCTTGCCGTTCCAGCGTTCGAAACATCTGA
AGCCGTCGAGCACGAAAACTCCATCGTCGAGCCTGCAAGCGTCAGATCTGAAGCTGTCGACACTGGAACCACCGTGGAACCTGCCGATCTGTCCACTGTTGCCATCGATT
TCCGCCAGCGTCGTTTGAGGAAAACGAAGGCTGAGGAAGAAGCTCCGACGTCGACGCCAGCGGTGGTGCCACCACCTGTGAAGAGTTCGGCTGAAGGAGGTTCCGACGAG
GCTAAAACGACACCGGATGAGAAAATCAGCAGTCCAGATCAGAAACTAAAAGAGAAGAAAGAAATTGAAAATCAAAACAGAGAAAAGGGGAATGAATCTAAAACAGAGGA
GGTGGGTAAGAATCGAGAAGAGCCGAAGATCTGCACCGGAAGTCGATTGTCGGGAGCGACTGGAGTTGGAAAACTTGTCGGCGGCTACACAGTCAGAAGGATGATTCTTC
ACATAACTTTGCAGATCCAGGCACTCCTCCTGACGGCGATTCGAGGTCCAAATGCAAAACATACTGATTAA
Protein sequenceShow/hide protein sequence
MTLLAPWNYRILASGLLVRGGTGFLYLLAVPAFETSEAVEHENSIVEPASVRSEAVDTGTTVEPADLSTVAIDFRQRRLRKTKAEEEAPTSTPAVVPPPVKSSAEGGSDE
AKTTPDEKISSPDQKLKEKKEIENQNREKGNESKTEEVGKNREEPKICTGSRLSGATGVGKLVGGYTVRRMILHITLQIQALLLTAIRGPNAKHTD