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Lcy05g016520 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g016520
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionzinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationChr05:23292001..23292634
RNA-Seq ExpressionLcy05g016520
SyntenyLcy05g016520
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily
IPR025525 - hAT-like transposase, RNase-H fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN61798.1 hypothetical protein VITISV_044291 [Vitis vinifera]5.2e-3042.56Show/hide
Query:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKV-----------------------EDLKDNKESKT--------
        MA+ M+AK+DKYW +  R+N LLYVVVVLDP YK++FV F F  LYD++ A ++ ++V                       E+    KES+         
Subjt:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKV-----------------------EDLKDNKESKT--------

Query:  --EFDRYIYE------PCERSGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV
           F R++YE        E    + E +  ++  FDIL WWKVN +K+K+LAQ+AKDVL+IPISTVA ES FST G++L+ +RS+LSP+TV+ L+
Subjt:  --EFDRYIYE------PCERSGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV

GFZ00850.1 hypothetical protein Acr_14g0004850 [Actinidia rufa]1.7e-2841.71Show/hide
Query:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVEDL-------------------KDNKESKTEFDRYIYEPCER
        MAR+M+ KFDKYW + D+ N +L V VVLDP +K+++V + +  +Y  + A      +  +                   K N +SK+E D+Y+      
Subjt:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVEDL-------------------KDNKESKTEFDRYIYEPCER

Query:  SGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV
          E +E D D   DF+IL WWK+NS+KY+IL+Q+A+DVL+IP+STVASES FST G+VL+ +RS+L+P+ V+ L+
Subjt:  SGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV

KAG5246028.1 zinc finger BED domain-containing protein [Salix suchowensis]2.2e-2844.02Show/hide
Query:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVED----------------------------LKDNKESKTEFD
        MA +M  KF+KYW  +   NF+LYV  VLDP +K+++V F F +L+D   A ++ +KV+D                             KD+ E+K E +
Subjt:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVED----------------------------LKDNKESKTEFD

Query:  RYIYEPCERSGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV
        RY+ + CE        DLD +   DIL WWKVN++KYKIL+++A+ VL+IPISTVASES FST G++L+ +RS LSP TVQALV
Subjt:  RYIYEPCERSGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV

XP_025607799.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Arachis hypogaea]2.2e-2840.3Show/hide
Query:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVEDLKDN------------------------------------
        MA RM+ K+DKYW +    N +++VVVVLDP YK++FV F+F  LYD+  A+ +G+KV++   N                                    
Subjt:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVEDLKDN------------------------------------

Query:  --KE-------SKTEFDRYIYEPCERSGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQAL
          KE       +K E D Y+ +  E+  +         + FDIL WWKVNS+KY IL+Q+A+DVL++P+STVASES FST G+VLN YRS+L+P+TV+AL
Subjt:  --KE-------SKTEFDRYIYEPCERSGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQAL

Query:  V
        +
Subjt:  V

XP_030936903.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Quercus lobata]4.4e-2938.46Show/hide
Query:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVE-------------------------------DLKDNK----
        MA  M  K+DKYW++    NFLLYV VVLDP YK+ +++F+F  +Y++  A E+ + VE                               D+ D +    
Subjt:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVE-------------------------------DLKDNK----

Query:  -----------------ESKTEFDRYIYEPCERSGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLS
                         E+K+E DR++ E CE  G         N++FDILAWWK+NS KY+IL+Q+A+DVL++P+STVASES FST G+VL+ +RS+L+
Subjt:  -----------------ESKTEFDRYIYEPCERSGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLS

Query:  PRTVQALV
        P+ V+AL+
Subjt:  PRTVQALV

TrEMBL top hitse value%identityAlignment
A0A7J0FRQ2 Uncharacterized protein8.1e-2941.71Show/hide
Query:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVEDL-------------------KDNKESKTEFDRYIYEPCER
        MAR+M+ KFDKYW + D+ N +L V VVLDP +K+++V + +  +Y  + A      +  +                   K N +SK+E D+Y+      
Subjt:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVEDL-------------------KDNKESKTEFDRYIYEPCER

Query:  SGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV
          E +E D D   DF+IL WWK+NS+KY+IL+Q+A+DVL+IP+STVASES FST G+VL+ +RS+L+P+ V+ L+
Subjt:  SGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV

A0A7J7FUW0 WD_REPEATS_REGION domain-containing protein1.4e-2839.32Show/hide
Query:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVEDL----------KDNKES-----------------------
        MA  M+AKFDKYW D D+ N LLYV VVLDP  K++++ F F+ +  EK  NE+  KV+D            D+K                         
Subjt:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVEDL----------KDNKES-----------------------

Query:  -----------------KTEFDRYIYEPCERSGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPR
                         K+E D+Y  + CE S +          +FDIL WWK NS+KYK+L+Q+A+DVL++P+STV SESTFSTRG++L+ +RS+LSP 
Subjt:  -----------------KTEFDRYIYEPCERSGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPR

Query:  TVQALV
         V+AL+
Subjt:  TVQALV

A0A7N2KQS5 BED-type domain-containing protein6.2e-2937.98Show/hide
Query:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVE-------------------------------DLKDNK----
        MA  M  K+DKYW++    NFLLYV VVLDP YK+ +++F+F  +Y++  A E+ + VE                               D+ D +    
Subjt:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVE-------------------------------DLKDNK----

Query:  -----------------ESKTEFDRYIYEPCERSGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLS
                         E+K+E DR++ E CE  G         N++FDILAWWK+NS KY+IL+Q+A+DVL++P+STVASES FST G+VL+ ++S+L+
Subjt:  -----------------ESKTEFDRYIYEPCERSGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLS

Query:  PRTVQALV
        P+ V+AL+
Subjt:  PRTVQALV

A0A7N2MJW3 Uncharacterized protein6.2e-2938.46Show/hide
Query:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVE-------------------------------DLKDNK----
        MA  M  K+DKYW++    NFLLYV VVLDP YK+ +++F+F  +Y++  A E+ + VE                               D+ D +    
Subjt:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVE-------------------------------DLKDNK----

Query:  -----------------ESKTEFDRYIYEPCERSGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLS
                         E+K+E DR++ E CE  G         N++FDILAWWK+NS KY+IL+Q+A+DVL++P+STVASES FST G VL+ +RS+L+
Subjt:  -----------------ESKTEFDRYIYEPCERSGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLS

Query:  PRTVQALV
        P+ V+AL+
Subjt:  PRTVQALV

A5BUV6 BED-type domain-containing protein2.5e-3042.56Show/hide
Query:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKV-----------------------EDLKDNKESKT--------
        MA+ M+AK+DKYW +  R+N LLYVVVVLDP YK++FV F F  LYD++ A ++ ++V                       E+    KES+         
Subjt:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKV-----------------------EDLKDNKESKT--------

Query:  --EFDRYIYE------PCERSGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV
           F R++YE        E    + E +  ++  FDIL WWKVN +K+K+LAQ+AKDVL+IPISTVA ES FST G++L+ +RS+LSP+TV+ L+
Subjt:  --EFDRYIYE------PCERSGEVVEDDLDINSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 18.4e-1530.39Show/hide
Query:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFT-------------------DLYDEKTANEI----------GSKVEDLKDNKESKT--
        +A+ M  +FDKYWKD    N +L + VV+DP +K++ V F+++                   +LY+E  A  +          G       +N    T  
Subjt:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFT-------------------DLYDEKTANEI----------GSKVEDLKDNKESKT--

Query:  -------EFDRYIYE--PCERSGEVVEDDLDIN-----SDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRG---QVLNLYRSTLSPRTV
               +FD Y+ E    + +   +E  LD +      +FDIL WWK+N+ KY  L++MA+D+L+IP+S V+S ++  + G   ++L+ YRS+  P  V
Subjt:  -------EFDRYIYE--PCERSGEVVEDDLDIN-----SDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRG---QVLNLYRSTLSPRTV

Query:  QALV
        +ALV
Subjt:  QALV

P03010 Putative AC9 transposase1.1e-1434.54Show/hide
Query:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYK---IEFVVFTF----------------TDLYD---------EKTANEIGSKVED-LKDNKESKTEF
        MA  M  KF+KYWK    +N  L V   LDP YK   IEF +  F                  LY           KT       ++D L +N++   EF
Subjt:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYK---IEFVVFTF----------------TDLYD---------EKTANEIGSKVED-LKDNKESKTEF

Query:  DRYIYEPCERSGEVVEDDLD---------INSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV
          Y++E  +   +V  ++LD          +  FDIL+WW+    +Y IL Q+A+DVL+I +STVASES FS  G+V++ YR+ L    V+AL+
Subjt:  DRYIYEPCERSGEVVEDDLD---------INSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV

P08770 Putative AC transposase1.1e-1434.54Show/hide
Query:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYK---IEFVVFTF----------------TDLYD---------EKTANEIGSKVED-LKDNKESKTEF
        MA  M  KF+KYWK    +N  L V   LDP YK   IEF +  F                  LY           KT       ++D L +N++   EF
Subjt:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYK---IEFVVFTF----------------TDLYD---------EKTANEIGSKVED-LKDNKESKTEF

Query:  DRYIYEPCERSGEVVEDDLD---------INSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV
          Y++E  +   +V  ++LD          +  FDIL+WW+    +Y IL Q+A+DVL+I +STVASES FS  G+V++ YR+ L    V+AL+
Subjt:  DRYIYEPCERSGEVVEDDLD---------INSDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 34.0e-1732.29Show/hide
Query:  ARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFT-------------------DLYDEKTANEIGSKVEDLKDNKESKT--------EFDRY
        A+ M  +FDKYWKD    N +L + VV+DP +K++ V F+++                   +LY E       ++   + DN  + T        +FD Y
Subjt:  ARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFT-------------------DLYDEKTANEIGSKVEDLKDNKESKT--------EFDRY

Query:  IYEPCERSGEVVEDDLDIN-------SDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTF----STRGQVLNLYRSTLSPRTVQAL
        + E       + E +  +         DF+IL WWK+N+ K+  L++MA+DVL+IP+S V+S S+     +T  Q+L+ YRS+L P TV+AL
Subjt:  IYEPCERSGEVVEDDLDIN-------SDFDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTF----STRGQVLNLYRSTLSPRTVQAL

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER8.1e-1829.89Show/hide
Query:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVEDLKD-------------------NKESKTEFDRYIYEPCER
        +A+ M+ K DKYW+D    + +L + VV+DP +K++ V F+F+ ++ E     I +  + + +                     +  ++FD YI    E 
Subjt:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVEDLKD-------------------NKESKTEFDRYIYEPCER

Query:  SGEVVEDDLDINSD---------FDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV
        +G+ ++ +LD   D         FD+L WWK N  KY  L++MA+D+LSIP+S  A +  F    + ++ Y+++L P TV+AL+
Subjt:  SGEVVEDDLDINSD---------FDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV

Arabidopsis top hitse value%identityAlignment
AT1G18560.1 BED zinc finger ;hAT family dimerisation domain6.2e-0531.67Show/hide
Query:  DILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV
        D+L WWKVNS +Y  L+ MA+D L++  ++ A E  F  +G+ ++  +  +   + Q+++
Subjt:  DILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV

AT3G42170.1 BED zinc finger ;hAT family dimerisation domain5.8e-1929.89Show/hide
Query:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVEDLKD-------------------NKESKTEFDRYIYEPCER
        +A+ M+ K DKYW+D    + +L + VV+DP +K++ V F+F+ ++ E     I +  + + +                     +  ++FD YI    E 
Subjt:  MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVEDLKD-------------------NKESKTEFDRYIYEPCER

Query:  SGEVVEDDLDINSD---------FDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV
        +G+ ++ +LD   D         FD+L WWK N  KY  L++MA+D+LSIP+S  A +  F    + ++ Y+++L P TV+AL+
Subjt:  SGEVVEDDLDINSD---------FDILAWWKVNSTKYKILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGAAGGATGGAAGCGAAGTTTGATAAATATTGGAAAGATAATGATAGAACAAATTTTCTCTTATATGTTGTTGTTGTGCTAGACCCTCATTATAAGATTGAATT
TGTGGTGTTTACGTTTACGGATCTTTATGATGAAAAGACTGCTAATGAAATTGGGAGTAAAGTTGAAGATTTGAAAGATAACAAAGAGAGTAAGACCGAGTTTGATAGGT
ATATATATGAGCCTTGTGAAAGGTCTGGAGAAGTGGTGGAAGATGACCTCGACATAAACAGTGATTTTGACATCTTGGCATGGTGGAAGGTAAATTCTACGAAGTATAAG
ATTCTTGCACAAATGGCTAAGGATGTACTTTCTATTCCTATCTCAACAGTAGCTTCAGAGTCGACTTTTAGCACAAGAGGTCAAGTATTGAATTTATATCGTAGTACATT
GTCTCCAAGAACGGTTCAAGCTCTCGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGAAGGATGGAAGCGAAGTTTGATAAATATTGGAAAGATAATGATAGAACAAATTTTCTCTTATATGTTGTTGTTGTGCTAGACCCTCATTATAAGATTGAATT
TGTGGTGTTTACGTTTACGGATCTTTATGATGAAAAGACTGCTAATGAAATTGGGAGTAAAGTTGAAGATTTGAAAGATAACAAAGAGAGTAAGACCGAGTTTGATAGGT
ATATATATGAGCCTTGTGAAAGGTCTGGAGAAGTGGTGGAAGATGACCTCGACATAAACAGTGATTTTGACATCTTGGCATGGTGGAAGGTAAATTCTACGAAGTATAAG
ATTCTTGCACAAATGGCTAAGGATGTACTTTCTATTCCTATCTCAACAGTAGCTTCAGAGTCGACTTTTAGCACAAGAGGTCAAGTATTGAATTTATATCGTAGTACATT
GTCTCCAAGAACGGTTCAAGCTCTCGTTTGA
Protein sequenceShow/hide protein sequence
MARRMEAKFDKYWKDNDRTNFLLYVVVVLDPHYKIEFVVFTFTDLYDEKTANEIGSKVEDLKDNKESKTEFDRYIYEPCERSGEVVEDDLDINSDFDILAWWKVNSTKYK
ILAQMAKDVLSIPISTVASESTFSTRGQVLNLYRSTLSPRTVQALV