; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy05g016530 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g016530
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationChr05:23314973..23316787
RNA-Seq ExpressionLcy05g016530
SyntenyLcy05g016530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-4442.8Show/hide
Query:  MFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPINR
        MFL++L++  PL DAT+L T I+ + D+  +  M S+IASH +SPR FVA L +    F +YSVD  ++S +SL SF DA++ G  FSS+++H+LE   +
Subjt:  MFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPINR

Query:  IILRFET-SRHIPQLRHELTLSPTEDMVFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQVEIQL
        +ILR+E  S + P L  EL LSP +    GQV Y K F++NS+  R+I+    ++HD  + V  T ++VKFS+ S EI  +KE+G C I+G   + E +L
Subjt:  IILRFET-SRHIPQLRHELTLSPTEDMVFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQVEIQL

Query:  LITLHPTLFFINLSTQAQRFVFFKTTDSRCVINVPV-QPHAQYLIYFSQI
         IT  P +FF+N + +A R  F+KTT+S+ VI+VP    + QY++YF ++
Subjt:  LITLHPTLFFINLSTQAQRFVFFKTTDSRCVINVPV-QPHAQYLIYFSQI

XP_022145570.1 uncharacterized protein LOC111014988 [Momordica charantia]5.0e-4745.56Show/hide
Query:  MFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPINR
        MFLIRL+ I PLFDA    T IA   D+  SP  F II S  S P  F+A L +   FF  ++VD  H S I L S    L+ G  + ++T H+LE  NR
Subjt:  MFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPINR

Query:  IILRFETSRHIPQLRHELTLSPTEDMVFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQVEIQLL
        ++LRFE SR++P+ R EL LSP+E+   G++ Y    SI S+ FR IVT  S Y +  IC TLTDSQVKFSV + EII +KE G+C I+   R VE +  
Subjt:  IILRFETSRHIPQLRHELTLSPTEDMVFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQVEIQLL

Query:  ITLHPTLFFINLSTQAQRFVFFKTTDSRCVINVPVQPHAQYLIYFSQI
         TLHPT FF +L+ +       K+TDSR +I +P   +  +L+YF Q+
Subjt:  ITLHPTLFFINLSTQAQRFVFFKTTDSRCVINVPVQPHAQYLIYFSQI

XP_022156149.1 uncharacterized protein LOC111023105 [Momordica charantia]8.9e-4444.09Show/hide
Query:  TMFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPIN
        TMF IR+  I  L  AT+  T IADEV + ++P +FS+IASHRSS   F  VL + ++FF  YSV   H S IS+H+F  AL+      S+T+HI + IN
Subjt:  TMFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPIN

Query:  RIILRFETSRHIPQLRHEL--TLSPTEDM---VFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQ
        R ILRFE S H  + RHEL  +L P +D     FG++ Y + F I+ + F +I+  FS++ D+T+ VT TDS+V FS  +  +   KE G+C ILG G  
Subjt:  RIILRFETSRHIPQLRHEL--TLSPTEDM---VFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQ

Query:  VEIQLLITLHPTLFFINLSTQAQRFVFFKTTDSRCVINVPVQPHAQYLIYFSQI
           Q LIT+ P +FF+ ++ Q+Q+  FFKT DSR  + VP   +  Y+IYF+ I
Subjt:  VEIQLLITLHPTLFFINLSTQAQRFVFFKTTDSRCVINVPVQPHAQYLIYFSQI

XP_023006010.1 uncharacterized protein LOC111498887 [Cucurbita maxima]8.1e-4546.37Show/hide
Query:  MFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPINR
        MFL+RL    PL +AT+L   I++E DL  S   FS+I S+ S  R FVA   I   FFA+YSVD  H+S +SL SF DA+  G  FSS+T+H  E  +R
Subjt:  MFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPINR

Query:  IILRFETSRHIPQLRHE-LTLSPTEDMVFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQVEIQL
        ++L+FE+S H     H  L LSP+++   GQ+ + + FSI S+ FR I+T    + + +I V+LT S+VKF   S E I +KE G C I+G   + EI  
Subjt:  IILRFETSRHIPQLRHE-LTLSPTEDMVFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQVEIQL

Query:  LITLHPTLFFINLSTQAQRFVFFKTTDSRCVINVPV-QPHAQYLIYFS
         I L+P  FF NLS  A R  F+KT DSRCVI VP    +AQY+IYFS
Subjt:  LITLHPTLFFINLSTQAQRFVFFKTTDSRCVINVPV-QPHAQYLIYFS

XP_031744160.1 uncharacterized protein LOC116404808 [Cucumis sativus]6.2e-4544.31Show/hide
Query:  MFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPINR
        MFL+RL+   P F AT+    IA E D+  +P  FSI  S++  PR FVA L +  + F +Y VD  H S ISL SF DAL+ G    S+T+H+L  IN+
Subjt:  MFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPINR

Query:  IILRFETSRHIPQLRHELTLSPTEDMVFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQVEIQLL
        +ILRFE+S H PQ+RHEL+L P+++   G++ Y K FSI+S+  RR++    ++H  +ICVT T SQVKFS+ S EI+ +KE  EC I+G   + E ++ 
Subjt:  IILRFETSRHIPQLRHELTLSPTEDMVFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQVEIQLL

Query:  ITLHPTLFFINLSTQAQRFVFFKTTDSRCVINVP-VQPHAQYLIYF
        I L+P LFF+N +    R  F+KTT     + VP    ++QY+I F
Subjt:  ITLHPTLFFINLSTQAQRFVFFKTTDSRCVINVP-VQPHAQYLIYF

TrEMBL top hitse value%identityAlignment
A0A1S3C8J1 uncharacterized protein LOC1034980103.1e-4243.84Show/hide
Query:  MFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPINR
        MFL+RLE+  PL DAT+L   +A + D+  +P M  II S+RS    FVA L + +  F ++SVD   +S +SL  F DA++ G  FSS+T+H+L+  N+
Subjt:  MFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPINR

Query:  IILRFETSRH-IPQLRHELTLSPTEDMVFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQVEIQL
        ++LRFET  H +P L HEL LSP +    GQV Y   F++ S   RRI+    ++H  T+ VT+T SQVKFS+ S EII +KE G C+I+G   +VE +L
Subjt:  IILRFETSRH-IPQLRHELTLSPTEDMVFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQVEIQL

Query:  LITLHPTLFFINLSTQAQR
         + L P +FF+N + +A +
Subjt:  LITLHPTLFFINLSTQAQR

A0A6J1CUU8 uncharacterized protein LOC1110149882.4e-4745.56Show/hide
Query:  MFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPINR
        MFLIRL+ I PLFDA    T IA   D+  SP  F II S  S P  F+A L +   FF  ++VD  H S I L S    L+ G  + ++T H+LE  NR
Subjt:  MFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPINR

Query:  IILRFETSRHIPQLRHELTLSPTEDMVFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQVEIQLL
        ++LRFE SR++P+ R EL LSP+E+   G++ Y    SI S+ FR IVT  S Y +  IC TLTDSQVKFSV + EII +KE G+C I+   R VE +  
Subjt:  IILRFETSRHIPQLRHELTLSPTEDMVFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQVEIQLL

Query:  ITLHPTLFFINLSTQAQRFVFFKTTDSRCVINVPVQPHAQYLIYFSQI
         TLHPT FF +L+ +       K+TDSR +I +P   +  +L+YF Q+
Subjt:  ITLHPTLFFINLSTQAQRFVFFKTTDSRCVINVPVQPHAQYLIYFSQI

A0A6J1DSH6 uncharacterized protein LOC1110231054.3e-4444.09Show/hide
Query:  TMFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPIN
        TMF IR+  I  L  AT+  T IADEV + ++P +FS+IASHRSS   F  VL + ++FF  YSV   H S IS+H+F  AL+      S+T+HI + IN
Subjt:  TMFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPIN

Query:  RIILRFETSRHIPQLRHEL--TLSPTEDM---VFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQ
        R ILRFE S H  + RHEL  +L P +D     FG++ Y + F I+ + F +I+  FS++ D+T+ VT TDS+V FS  +  +   KE G+C ILG G  
Subjt:  RIILRFETSRHIPQLRHEL--TLSPTEDM---VFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQ

Query:  VEIQLLITLHPTLFFINLSTQAQRFVFFKTTDSRCVINVPVQPHAQYLIYFSQI
           Q LIT+ P +FF+ ++ Q+Q+  FFKT DSR  + VP   +  Y+IYF+ I
Subjt:  VEIQLLITLHPTLFFINLSTQAQRFVFFKTTDSRCVINVPVQPHAQYLIYFSQI

A0A6J1H2Z8 uncharacterized protein LOC1114600112.8e-4344.76Show/hide
Query:  MFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPINR
        MFL+RL    PL +AT++   I++E DL  S   FS+I S+ S    FVA   I   FFA+Y VD  H+S +SL SF +A+  G  FSS+T+H  E  +R
Subjt:  MFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPINR

Query:  IILRFETSRHI-PQLRHELTLSPTEDMVFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQVEIQL
        ++L+FE+S H   Q+   L LSP+++   GQ+ + + FSI S+ FR I+T    + + +I V+LT S+VKF   S E I +KE G C I+G   Q EI  
Subjt:  IILRFETSRHI-PQLRHELTLSPTEDMVFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQVEIQL

Query:  LITLHPTLFFINLSTQAQRFVFFKTTDSRCVINVPV-QPHAQYLIYFS
         I L+P  FF NLS  A R  F+KT DSRCVI +P    +AQY+IYFS
Subjt:  LITLHPTLFFINLSTQAQRFVFFKTTDSRCVINVPV-QPHAQYLIYFS

A0A6J1KZ05 uncharacterized protein LOC1114988873.9e-4546.37Show/hide
Query:  MFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPINR
        MFL+RL    PL +AT+L   I++E DL  S   FS+I S+ S  R FVA   I   FFA+YSVD  H+S +SL SF DA+  G  FSS+T+H  E  +R
Subjt:  MFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTISLHSFRDALIQGCQFSSVTMHILEPINR

Query:  IILRFETSRHIPQLRHE-LTLSPTEDMVFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQVEIQL
        ++L+FE+S H     H  L LSP+++   GQ+ + + FSI S+ FR I+T    + + +I V+LT S+VKF   S E I +KE G C I+G   + EI  
Subjt:  IILRFETSRHIPQLRHE-LTLSPTEDMVFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKETGECEILGDGRQVEIQL

Query:  LITLHPTLFFINLSTQAQRFVFFKTTDSRCVINVPV-QPHAQYLIYFS
         I L+P  FF NLS  A R  F+KT DSRCVI VP    +AQY+IYFS
Subjt:  LITLHPTLFFINLSTQAQRFVFFKTTDSRCVINVPV-QPHAQYLIYFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGTGGGCAAGGGAAGAAGGCTCTCCAATATAAAAGAAGCCAAATCAAATGGGAAAAAAACAGAGTTGCTTAAACTTGAGCAATACCATTTTGACATCACCAACCA
CACCATGTTCTTGATCAGGCTCGAGCGCATTATTCCTCTTTTCGACGCAACCACCCTATTCACTTTCATTGCCGACGAAGTCGACCTCAATGTGTCGCCGCCGATGTTCT
CGATAATCGCCTCGCACCGTTCATCCCCTCGGGCCTTCGTCGCAGTGCTGCACATCCTGCAGTCATTCTTCGCCCACTACTCCGTCGATTGGATTCACAATTCAACGATC
TCCCTCCACTCCTTCCGAGATGCTTTGATCCAAGGCTGCCAATTTTCTTCCGTCACCATGCACATCCTCGAACCCATCAATCGAATCATCCTTAGATTCGAAACTTCAAG
ACATATTCCACAACTGCGTCATGAACTGACATTGTCGCCTACGGAAGACATGGTTTTTGGCCAAGTTTCCTACGTGAAATTGTTCTCAATTAATTCGGAAAGGTTTAGGC
GCATTGTAACAGCATTTTCTGTGTACCATGATCAAACAATTTGTGTTACTCTAACGGATTCACAAGTCAAGTTCTCCGTTGGATCTGTGGAGATAATTTTTAGCAAAGAG
ACAGGTGAATGTGAAATTCTAGGTGATGGACGACAAGTTGAAATCCAATTGCTAATCACCCTTCATCCCACGTTGTTTTTCATTAATTTGTCAACTCAAGCGCAAAGGTT
TGTGTTTTTCAAGACAACTGATTCTCGTTGTGTAATCAATGTTCCAGTTCAACCGCATGCTCAATATTTGATTTATTTTTCCCAAATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGTGGGCAAGGGAAGAAGGCTCTCCAATATAAAAGAAGCCAAATCAAATGGGAAAAAAACAGAGTTGCTTAAACTTGAGCAATACCATTTTGACATCACCAACCA
CACCATGTTCTTGATCAGGCTCGAGCGCATTATTCCTCTTTTCGACGCAACCACCCTATTCACTTTCATTGCCGACGAAGTCGACCTCAATGTGTCGCCGCCGATGTTCT
CGATAATCGCCTCGCACCGTTCATCCCCTCGGGCCTTCGTCGCAGTGCTGCACATCCTGCAGTCATTCTTCGCCCACTACTCCGTCGATTGGATTCACAATTCAACGATC
TCCCTCCACTCCTTCCGAGATGCTTTGATCCAAGGCTGCCAATTTTCTTCCGTCACCATGCACATCCTCGAACCCATCAATCGAATCATCCTTAGATTCGAAACTTCAAG
ACATATTCCACAACTGCGTCATGAACTGACATTGTCGCCTACGGAAGACATGGTTTTTGGCCAAGTTTCCTACGTGAAATTGTTCTCAATTAATTCGGAAAGGTTTAGGC
GCATTGTAACAGCATTTTCTGTGTACCATGATCAAACAATTTGTGTTACTCTAACGGATTCACAAGTCAAGTTCTCCGTTGGATCTGTGGAGATAATTTTTAGCAAAGAG
ACAGGTGAATGTGAAATTCTAGGTGATGGACGACAAGTTGAAATCCAATTGCTAATCACCCTTCATCCCACGTTGTTTTTCATTAATTTGTCAACTCAAGCGCAAAGGTT
TGTGTTTTTCAAGACAACTGATTCTCGTTGTGTAATCAATGTTCCAGTTCAACCGCATGCTCAATATTTGATTTATTTTTCCCAAATATGA
Protein sequenceShow/hide protein sequence
MGVGKGRRLSNIKEAKSNGKKTELLKLEQYHFDITNHTMFLIRLERIIPLFDATTLFTFIADEVDLNVSPPMFSIIASHRSSPRAFVAVLHILQSFFAHYSVDWIHNSTI
SLHSFRDALIQGCQFSSVTMHILEPINRIILRFETSRHIPQLRHELTLSPTEDMVFGQVSYVKLFSINSERFRRIVTAFSVYHDQTICVTLTDSQVKFSVGSVEIIFSKE
TGECEILGDGRQVEIQLLITLHPTLFFINLSTQAQRFVFFKTTDSRCVINVPVQPHAQYLIYFSQI