; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy05g016750 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g016750
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr05:24523855..24526265
RNA-Seq ExpressionLcy05g016750
SyntenyLcy05g016750
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR043502 - DNA/RNA polymerase superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]9.7e-9129.31Show/hide
Query:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM
        +K +LS +IT  QSAF+PNR ++DN +  FE ++ ++  K G     ALKLDM+KAYDRVEW FL+ +ML+LGF   WV  ++  +S+  FS    G  +
Subjt:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM

Query:  GHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFS
        GH++P RGLRQG PLSPY FL+C EG S LLRGAER   + G +VAR +P ++HL FADDS+LF KA+  +   + +L   YE  +GQ IN+ KS ++ S
Subjt:  GHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFS

Query:  PNT-------------------------------------------------------------------------------------------------
        PN                                                                                                  
Subjt:  PNT-------------------------------------------------------------------------------------------------

Query:  -----------------------------GLESQQYIAQILAVARC--------------------------------------PSLMWGRELLSRGCHW
                                     G    +   Q L   +C                                       SL WG+ELL++G  W
Subjt:  -----------------------------GLESQQYIAQILAVARC--------------------------------------PSLMWGRELLSRGCHW

Query:  RIVNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVNDLFTVSSQWDEPKIREHFSAVDCDVILSIPLNNWSGHDVRIWHFAKSGIFTMKSGYRLA--QS
        R+ +G+SI VY   WLP  S  ++ S P LP  + V DLFT S QW+ P +++ F   + D IL IPL + +GHD  IWH+ ++G++++KSGYRLA  + 
Subjt:  RIVNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVNDLFTVSSQWDEPKIREHFSAVDCDVILSIPLNNWSGHDVRIWHFAKSGIFTMKSGYRLA--QS

Query:  LSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCVFCGAYGEDYFHLFWRCLLVRDLWSQSRFFSLYQSIMLPF
          + G P S+       +W  IW L++P+++KFF WR   + LP    L  R +  + +C  C    E   H  W C   +++W  S + ++ +   +  
Subjt:  LSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCVFCGAYGEDYFHLFWRCLLVRDLWSQSRFFSLYQSIMLPF

Query:  FDESVWAVKFQFAVFYFEVFVLFCWMIWNARNTVLWGGSYDES-NLWLRASEYTRSFQMANVVCVDTGGWGLLPCGEGGSDAWVPPSGVVLKLNTDASVR
        F E   A++   +     +F   CW +WN RN+ ++ G  + +  L  R ++  + F  AN +     G    P  +     W PP  V     +  SVR
Subjt:  FDESVWAVKFQFAVFYFEVFVLFCWMIWNARNTVLWGGSYDES-NLWLRASEYTRSFQMANVVCVDTGGWGLLPCGEGGSDAWVPPSGVVLKLNTDASVR

Query:  LDFGCAGGGVVLRKALGEVLLTGCVILPRCWCVGLAEGWALLEGVRLAMYAGFSCFMVE------TNSLRLVKIWNGEVVDVSEVGLLLLELRRVVQNVR
              G GVV+R A GE +      +   +     E  A +EG+R A+  GF+  ++E       NS+   + +NG  +D    G LL E+  ++ N R
Subjt:  LDFGCAGGGVVLRKALGEVLLTGCVILPRCWCVGLAEGWALLEGVRLAMYAGFSCFMVE------TNSLRLVKIWNGEVVDVSEVGLLLLELRRVVQNVR

Query:  DFQVSFVSRRGN
             +  R GN
Subjt:  DFQVSFVSRRGN

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]9.1e-9729.8Show/hide
Query:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM
        +K +L  +IT NQSAF+PNR ++DN +  FE +H ++  K G     ALKLDM+KAYDRVEW FL+E+ML+LGF   WV  ++  +S+  FS    G  +
Subjt:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM

Query:  GHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFS
        GH++P RGLRQG PLSPY FL+C EG S LLRGAER   + G +VAR  P ++HL FADDS+LF KA+    + + +L   YE  SGQ IN+ KS  + S
Subjt:  GHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFS

Query:  PNT-------------------------------------------------------------------------------------------------
        PN                                                                                                  
Subjt:  PNT-------------------------------------------------------------------------------------------------

Query:  -----------------------------GLESQQYIAQILAVARC--------------------------------------PSLMWGRELLSRGCHW
                                     G    +   Q L   +C                                       SL WG+ELL++G  W
Subjt:  -----------------------------GLESQQYIAQILAVARC--------------------------------------PSLMWGRELLSRGCHW

Query:  RIVNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVNDLFTVSSQWDEPKIREHFSAVDCDVILSIPLNNWSGHDVRIWHFAKSGIFTMKSGYRLA--QS
        R+ NG+SI VY   WLP  S  ++ S P LP  + V DLFT S QW+ P +++ F   + D  L IPL + +GHD  IWH+ ++G++++KSGYRLA  + 
Subjt:  RIVNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVNDLFTVSSQWDEPKIREHFSAVDCDVILSIPLNNWSGHDVRIWHFAKSGIFTMKSGYRLA--QS

Query:  LSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCVFCGAYGEDYFHLFWRCLLVRDLWSQSRFFSLYQSIMLPF
          + G P S        +W  IW L++P+++KFF WR   + LP    L  R +  + +C  C    E   H  W C   +++W  S + ++ +   +  
Subjt:  LSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCVFCGAYGEDYFHLFWRCLLVRDLWSQSRFFSLYQSIMLPF

Query:  FDESVWAVKFQFAVFYFEVFVLFCWMIWNARNTVLW-GGSYDESNLWLRASEYTRSFQMANVVCVDTGGWGLLPCGEGGSDAWVPPSGVVLKLNTDASVR
        F E   A++   +     +F   CW +WN RN+ ++ G S   + L  R ++  + F  AN +     G    P  +     W PP   + K+N D +V+
Subjt:  FDESVWAVKFQFAVFYFEVFVLFCWMIWNARNTVLW-GGSYDESNLWLRASEYTRSFQMANVVCVDTGGWGLLPCGEGGSDAWVPPSGVVLKLNTDASVR

Query:  LDFGCAGGGVVLRKALGEVLLTGCVILPRCWCVGLAEGWALLEGVRLAMYAGFSCFMVE------TNSLRLVKIWNGEVVDVSEVGLLLLELRRVVQNVR
              G GVV+R A GE +      +   +     E  A +EG+R A+  GF+  ++E       NS+   +  NG  +D    GLL+ E+  ++ N R
Subjt:  LDFGCAGGGVVLRKALGEVLLTGCVILPRCWCVGLAEGWALLEGVRLAMYAGFSCFMVE------TNSLRLVKIWNGEVVDVSEVGLLLLELRRVVQNVR

Query:  DFQVSFVSRRGN
             +  R GN
Subjt:  DFQVSFVSRRGN

XP_030487384.1 uncharacterized protein LOC115704310 [Cannabis sativa]1.4e-8929.94Show/hide
Query:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM
        M+  L  +++ +QSAF+  R + DNAI+G+E +H +R+ +  N    ALKLDM+KAYDRVEW FL+ +M++LG+  GWV  I+  ++SV FSF +NGE  
Subjt:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM

Query:  GHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFS
        G V P RGLRQGDPLSP+ FLLC E  S+L++ AE+   + G    R    +SHLFFADDSL+F +A+ +E +  + LL  Y  ASGQ +NF KS + F 
Subjt:  GHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFS

Query:  PNTGLESQQYIAQILAV-----------------------------------------------------------------------------------
         N     +  +A ++ V                                                                                   
Subjt:  PNTGLESQQYIAQILAV-----------------------------------------------------------------------------------

Query:  --------------------------------ARC--------PSLMWGRELLSRGCHWRIVNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVNDLFT
                                        A+C         SL+WG++++ +G  WRI N  S+ V   +WLP   + ++   P LP    V DL  
Subjt:  --------------------------------ARC--------PSLMWGRELLSRGCHWRIVNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVNDLFT

Query:  VSSQWDEPKIREHFSAVDCDVILSIPLNNWSGHDVRIWHFAKSGIFTMKSGYRLAQSLSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRL
            WD+  +R  F+  D D+ILS+P + W   D  +WH++K G ++++SGYR+A +L +  R   S + A   WW  +WKL++P +VK F W++  + +
Subjt:  VSSQWDEPKIREHFSAVDCDVILSIPLNNWSGHDVRIWHFAKSGIFTMKSGYRLAQSLSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRL

Query:  PLKANLLCRGMDVSNLCVFC--GAYGEDYFHLFWRCLLVRDLWSQSRFFSLYQSIMLPFFDESVWAVKFQFAVFYFEVFVLFCWMIWNARNTVLWGGSYD
        P  A L  R + V   C  C  G Y E  FH  W C + R++W+ + F+   Q +        +  +   F     E+F++  W +W  RN+V  GG   
Subjt:  PLKANLLCRGMDVSNLCVFC--GAYGEDYFHLFWRCLLVRDLWSQSRFFSLYQSIMLPFFDESVWAVKFQFAVFYFEVFVLFCWMIWNARNTVLWGGSYD

Query:  ESNLWLR-ASEYTRSFQMANVVCVDTGGWGLLPCGEGGSDAWVPPSGVVLKLNTDASVRLDFGCAGGGVVLRKALGEV
        +++  L   S+Y   F+ +N    D             +  W+PP+    K+N D  V++  G +   +V+R  +G V
Subjt:  ESNLWLR-ASEYTRSFQMANVVCVDTGGWGLLPCGEGGSDAWVPPSGVVLKLNTDASVRLDFGCAGGGVVLRKALGEV

XP_030505962.1 uncharacterized protein LOC115720894 [Cannabis sativa]1.4e-9230.6Show/hide
Query:  KRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKMG
        K +L  +I+  QSAFLPNR + DN ++ FE IH L+ RK G+  +AA+KLDMSKA+DRVEWSFL  +M ++GF+  W+ LI+R + +  FSFNLNG  +G
Subjt:  KRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKMG

Query:  HVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFSP
         + P RGLRQGDPLSPY FL+C EGLS LL+  ER   + G+ V+R +P ISHLFFADDSL+F++A       ++  L +Y RASGQ +N +KSV++FSP
Subjt:  HVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFSP

Query:  NTGLESQQYIAQILA--VARC----------------------------------------------------------------PS-------------
        NT    Q     IL   ++ C                                                                PS             
Subjt:  NTGLESQQYIAQILA--VARC----------------------------------------------------------------PS-------------

Query:  ---------------------------LMWGRELLSRGCHWRIVNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVNDLFTVSSQWDEPKIREHFSAVD
                                   + WGR+LL +G   +I +G S+      W+P  S      Y   P  + V+   T   +W+ P +   FSAVD
Subjt:  ---------------------------LMWGRELLSRGCHWRIVNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVNDLFTVSSQWDEPKIREHFSAVD

Query:  CDVILSIPLNNWSGHDVRIWHFAKSGIFTMKSGYRLAQSLSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCV
         D ILSIPL++    D  IWHF  S  +T+++GY LA  L     P S  S+++ SWW   W L++PS+VK F W+     +P  A+L    +  S  C 
Subjt:  CDVILSIPLNNWSGHDVRIWHFAKSGIFTMKSGYRLAQSLSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCV

Query:  FCGAYGEDYFHLFWRCLLVRDLWSQSRFFSLYQSIMLPFFDESVWAVKFQFAVFYFEVFVLFCWMIWNARNTVLWGGS-YDESNLWLRASEYTRSFQMAN
         C    E   H    C   + +W  + +   Y  +    F + +  +         E      W +W  RN  + G      S +W +++ Y  +FQ  +
Subjt:  FCGAYGEDYFHLFWRCLLVRDLWSQSRFFSLYQSIMLPFFDESVWAVKFQFAVFYFEVFVLFCWMIWNARNTVLWGGS-YDESNLWLRASEYTRSFQMAN

Query:  VVCVDTGGWGLLPCGEGGSDAWVPPSGVVLKLNTDASVRLDFGCAGGGVVLRKALGEVLLTGCVILPRCWCVGLAEGWALLEGVRLAMYAGFSCFMVETN
         +        ++  G      W+ P    LK+N DA+  +     G G+++R + G+++          +     E  ALL G+  A +       +E++
Subjt:  VVCVDTGGWGLLPCGEGGSDAWVPPSGVVLKLNTDASVRLDFGCAGGGVVLRKALGEVLLTGCVILPRCWCVGLAEGWALLEGVRLAMYAGFSCFMVETN

Query:  SLRLVKIWNGEVVDVSEVGLLLLELRRVVQNVRDFQVSFVSRRGN
        SL LV   N +   +S  G L+L+++  +  +    VS V R  N
Subjt:  SLRLVKIWNGEVVDVSEVGLLLLELRRVVQNVRDFQVSFVSRRGN

XP_030508858.1 uncharacterized protein LOC115723499 [Cannabis sativa]2.2e-9029.2Show/hide
Query:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM
        ++  L  +I+  QSAFL  R + DN ++ FE +H L+ RK G+  +AA+KLDMSKA+DRVEWS++ +IM+++GF    VDLI+R + SV +SF LNG+ +
Subjt:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM

Query:  GHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFS
        G V+PTRG+RQGDPLSPY FL+C EGLS LL+  E    + G +V+R++P +SHLFFADDS+LF +A+    + ++ +L +Y RASGQ IN +K V++FS
Subjt:  GHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFS

Query:  PNTGLESQQYIAQIL-------------------------------------------------------------------------------------
        PNT   +Q +  Q+L                                                                                     
Subjt:  PNTGLESQQYIAQIL-------------------------------------------------------------------------------------

Query:  -------------------------------------AVARCPSL-----MWGRELLSRGCHWRIVNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVN
                                              V  CPSL     +WG+ELL +G  WR+ +G  I      WLP  +     S+    S   V 
Subjt:  -------------------------------------AVARCPSL-----MWGRELLSRGCHWRIVNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVN

Query:  DLFTVSSQWDEPKIREHFSAVDCDVILSIPLNNWSGHDVRIWHFAKSGIFTMKSGYRLAQSLSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLC
        DL     QWD   +  +F   + D ILSIPL+ +   D  IW+   SG + +KSGY  A SL+      S+Y     +WW   WKL++PS+++ F W++ 
Subjt:  DLFTVSSQWDEPKIREHFSAVDCDVILSIPLNNWSGHDVRIWHFAKSGIFTMKSGYRLAQSLSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLC

Query:  LNRLPLKANLLCRGMDVSNLCVFCGAYGEDYFHLFWRCLLVRDLWSQSRFFSLYQSIMLPFFDESVWAVKFQFAVFYFEVFVLFCWMIWNARNTVLWGGS
         N +P+ A L  + +  +  C  C    E   H  + C   +++W  S     ++       +E ++      +   FE F+  CW IW  RN      S
Subjt:  LNRLPLKANLLCRGMDVSNLCVFCGAYGEDYFHLFWRCLLVRDLWSQSRFFSLYQSIMLPFFDESVWAVKFQFAVFYFEVFVLFCWMIWNARNTVLWGGS

Query:  YDESNLWLR-ASEYTRSFQMANVVCVDTGGWGLL---PCGE----GGSDAWVPPSGVVLKLNTDASVRLDFGCAGGGVVLRKALGEVLLTGCVILPRCWC
          +    L  A++Y   +Q A    V           P         +D W+ P     KLNTDA+        G G VLR + G +       +  C+ 
Subjt:  YDESNLWLR-ASEYTRSFQMANVVCVDTGGWGLL---PCGE----GGSDAWVPPSGVVLKLNTDASVRLDFGCAGGGVVLRKALGEVLLTGCVILPRCWC

Query:  VGLAEGWALLEGVRLAMYAGFSCFMVETNSLRLVKIWNGEVVDVSEVGLLLLELRRVVQNVRDFQVSFVSRRGN
            E  AL+  ++  +  G +  ++ET+SL +V+         S    +L ++  +V +    Q++ V R  N
Subjt:  VGLAEGWALLEGVRLAMYAGFSCFMVETNSLRLVKIWNGEVVDVSEVGLLLLELRRVVQNVRDFQVSFVSRRGN

TrEMBL top hitse value%identityAlignment
A0A2N9I4W7 Reverse transcriptase domain-containing protein3.3e-9233.39Show/hide
Query:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM
        +K++LS+II+ +QSAF+P R + DN +L FE +H ++ ++ G     A KLDMSKAYDRVEWS+L+ +ML++GFD  WVDL++  +S V +S  LNG   
Subjt:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM

Query:  GHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFS
        GH++P+RGLRQGDPLSPY FL+C EG ++L+R AE   LI G  ++R  P  SHLFFADDS++F +A   E + +R +L LYE ASGQ +N EK+ + FS
Subjt:  GHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFS

Query:  PNTGLESQQYIAQILAVAR---------CPSLMWGRELLSRGCHWRI----VNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVNDL----FTVSSQWD
         NT    ++ I   + V            P ++ G+E+L +     I    ++   +PV  SN +  +S L    +     +  ++ +       S +W+
Subjt:  PNTGLESQQYIAQILAVAR---------CPSLMWGRELLSRGCHWRI----VNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVNDL----FTVSSQWD

Query:  EPKIREHFSAVDCDVILSIPLNNWSGHDVRIWHFAKSGIFTMKSGYRLAQSLSLQGRPF-SSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKAN
         P I E F A +  +I SIPL+N    DV IW   ++G++++KS Y L      +     SS +S  R  W  IW+  VP ++K F W+ C   LP K N
Subjt:  EPKIREHFSAVDCDVILSIPLNNWSGHDVRIWHFAKSGIFTMKSGYRLAQSLSLQGRPF-SSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKAN

Query:  LLCRGMDVSNLCVFCGAYGEDYFHLFWRCLLVRDLWSQSRFFSLYQSIMLPFFDESVWAVKFQFAVFYF---EVFVLFCWMIWNARNTVLWGGSYDESNL
        L  + +  S  C FC    E   H+   C   +++W  S   ++ Q    P F      V     V  F   E+     W +W ARN  +W    +  N 
Subjt:  LLCRGMDVSNLCVFCGAYGEDYFHLFWRCLLVRDLWSQSRFFSLYQSIMLPFFDESVWAVKFQFAVFYF---EVFVLFCWMIWNARNTVLWGGSYDESNL

Query:  WLRASEYTRSFQMANVVCVDTGGWGLLPCGEGGSDAWVPPSGVVLKLNTDASVRLDFGCAGGGVVLRKALGEVLLTGCVILPRCWCVGLAEGWALLEGVR
          R       F +   +       G+LP        W PP+  V K+N   S R        G V+R +LG+V+   C +      V     +A+ + + 
Subjt:  WLRASEYTRSFQMANVVCVDTGGWGLLPCGEGGSDAWVPPSGVVLKLNTDASVRLDFGCAGGGVVLRKALGEVLLTGCVILPRCWCVGLAEGWALLEGVR

Query:  LAMYAGFSCFMVETNSLRLVKIWNGEVVDVSEVGLLLLELR
        LA   G    MVE     L+         ++  G L+ ++R
Subjt:  LAMYAGFSCFMVETNSLRLVKIWNGEVVDVSEVGLLLLELR

A0A5E4FZN9 PREDICTED: retrotransposon4.4e-9729.8Show/hide
Query:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM
        +K +L  +IT NQSAF+PNR ++DN +  FE +H ++  K G     ALKLDM+KAYDRVEW FL+E+ML+LGF   WV  ++  +S+  FS    G  +
Subjt:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM

Query:  GHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFS
        GH++P RGLRQG PLSPY FL+C EG S LLRGAER   + G +VAR  P ++HL FADDS+LF KA+    + + +L   YE  SGQ IN+ KS  + S
Subjt:  GHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFS

Query:  PNT-------------------------------------------------------------------------------------------------
        PN                                                                                                  
Subjt:  PNT-------------------------------------------------------------------------------------------------

Query:  -----------------------------GLESQQYIAQILAVARC--------------------------------------PSLMWGRELLSRGCHW
                                     G    +   Q L   +C                                       SL WG+ELL++G  W
Subjt:  -----------------------------GLESQQYIAQILAVARC--------------------------------------PSLMWGRELLSRGCHW

Query:  RIVNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVNDLFTVSSQWDEPKIREHFSAVDCDVILSIPLNNWSGHDVRIWHFAKSGIFTMKSGYRLA--QS
        R+ NG+SI VY   WLP  S  ++ S P LP  + V DLFT S QW+ P +++ F   + D  L IPL + +GHD  IWH+ ++G++++KSGYRLA  + 
Subjt:  RIVNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVNDLFTVSSQWDEPKIREHFSAVDCDVILSIPLNNWSGHDVRIWHFAKSGIFTMKSGYRLA--QS

Query:  LSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCVFCGAYGEDYFHLFWRCLLVRDLWSQSRFFSLYQSIMLPF
          + G P S        +W  IW L++P+++KFF WR   + LP    L  R +  + +C  C    E   H  W C   +++W  S + ++ +   +  
Subjt:  LSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCVFCGAYGEDYFHLFWRCLLVRDLWSQSRFFSLYQSIMLPF

Query:  FDESVWAVKFQFAVFYFEVFVLFCWMIWNARNTVLW-GGSYDESNLWLRASEYTRSFQMANVVCVDTGGWGLLPCGEGGSDAWVPPSGVVLKLNTDASVR
        F E   A++   +     +F   CW +WN RN+ ++ G S   + L  R ++  + F  AN +     G    P  +     W PP   + K+N D +V+
Subjt:  FDESVWAVKFQFAVFYFEVFVLFCWMIWNARNTVLW-GGSYDESNLWLRASEYTRSFQMANVVCVDTGGWGLLPCGEGGSDAWVPPSGVVLKLNTDASVR

Query:  LDFGCAGGGVVLRKALGEVLLTGCVILPRCWCVGLAEGWALLEGVRLAMYAGFSCFMVE------TNSLRLVKIWNGEVVDVSEVGLLLLELRRVVQNVR
              G GVV+R A GE +      +   +     E  A +EG+R A+  GF+  ++E       NS+   +  NG  +D    GLL+ E+  ++ N R
Subjt:  LDFGCAGGGVVLRKALGEVLLTGCVILPRCWCVGLAEGWALLEGVRLAMYAGFSCFMVE------TNSLRLVKIWNGEVVDVSEVGLLLLELRRVVQNVR

Query:  DFQVSFVSRRGN
             +  R GN
Subjt:  DFQVSFVSRRGN

A0A803NI87 Uncharacterized protein6.6e-9330.6Show/hide
Query:  KRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKMG
        K +L  +I+  QSAFLPNR + DN ++ FE IH L+ RK G+  +AA+KLDMSKA+DRVEWSFL  +M ++GF+  W+ LI+R + +  FSFNLNG  +G
Subjt:  KRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKMG

Query:  HVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFSP
         + P RGLRQGDPLSPY FL+C EGLS LL+  ER   + G+ V+R +P ISHLFFADDSL+F++A       ++  L +Y RASGQ +N +KSV++FSP
Subjt:  HVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFSP

Query:  NTGLESQQYIAQILA--VARC----------------------------------------------------------------PS-------------
        NT    Q     IL   ++ C                                                                PS             
Subjt:  NTGLESQQYIAQILA--VARC----------------------------------------------------------------PS-------------

Query:  ---------------------------LMWGRELLSRGCHWRIVNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVNDLFTVSSQWDEPKIREHFSAVD
                                   + WGR+LL +G   +I +G S+      W+P  S      Y   P  + V+   T   +W+ P +   FSAVD
Subjt:  ---------------------------LMWGRELLSRGCHWRIVNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVNDLFTVSSQWDEPKIREHFSAVD

Query:  CDVILSIPLNNWSGHDVRIWHFAKSGIFTMKSGYRLAQSLSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCV
         D ILSIPL++    D  IWHF  S  +T+++GY LA  L     P S  S+++ SWW   W L++PS+VK F W+     +P  A+L    +  S  C 
Subjt:  CDVILSIPLNNWSGHDVRIWHFAKSGIFTMKSGYRLAQSLSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCV

Query:  FCGAYGEDYFHLFWRCLLVRDLWSQSRFFSLYQSIMLPFFDESVWAVKFQFAVFYFEVFVLFCWMIWNARNTVLWGGS-YDESNLWLRASEYTRSFQMAN
         C    E   H    C   + +W  + +   Y  +    F + +  +         E      W +W  RN  + G      S +W +++ Y  +FQ  +
Subjt:  FCGAYGEDYFHLFWRCLLVRDLWSQSRFFSLYQSIMLPFFDESVWAVKFQFAVFYFEVFVLFCWMIWNARNTVLWGGS-YDESNLWLRASEYTRSFQMAN

Query:  VVCVDTGGWGLLPCGEGGSDAWVPPSGVVLKLNTDASVRLDFGCAGGGVVLRKALGEVLLTGCVILPRCWCVGLAEGWALLEGVRLAMYAGFSCFMVETN
         +        ++  G      W+ P    LK+N DA+  +     G G+++R + G+++          +     E  ALL G+  A +       +E++
Subjt:  VVCVDTGGWGLLPCGEGGSDAWVPPSGVVLKLNTDASVRLDFGCAGGGVVLRKALGEVLLTGCVILPRCWCVGLAEGWALLEGVRLAMYAGFSCFMVETN

Query:  SLRLVKIWNGEVVDVSEVGLLLLELRRVVQNVRDFQVSFVSRRGN
        SL LV   N +   +S  G L+L+++  +  +    VS V R  N
Subjt:  SLRLVKIWNGEVVDVSEVGLLLLELRRVVQNVRDFQVSFVSRRGN

A0A803P3X4 Uncharacterized protein2.1e-9932Show/hide
Query:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM
        M+  L  +++ +QSAF+  R + DNAI+G+E +H +R+ +  N    ALKLDM+KAYDRVEW FL+ +M++LG+  GWV+ I+  +SSV FSF +NGE  
Subjt:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM

Query:  GHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFS
        G V+P RG+RQGDPLSP+ FLLC E  S+L++ AE+   I G    R    +SHLF ADDSL+F +A+ +E +  + LL  Y  ASGQ +NF KS + F 
Subjt:  GHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFS

Query:  PNT-------------------------------------------------------------------------------GLESQQYIAQILAVARCP
         N                                                                                G        Q L   +  
Subjt:  PNT-------------------------------------------------------------------------------GLESQQYIAQILAVARCP

Query:  SLMWGRELLSRGCHWRIVNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVNDLFTVSSQWDEPKIREHFSAVDCDVILSIPLNNWSGHDVRIWHFAKSG
        SL+WG++++ +G  WRI  G S+ V    WLP   + ++   P LP    V DL  ++ +WDE  +R  F+  D D+IL +P + W   D  +WH++K G
Subjt:  SLMWGRELLSRGCHWRIVNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVNDLFTVSSQWDEPKIREHFSAVDCDVILSIPLNNWSGHDVRIWHFAKSG

Query:  IFTMKSGYRLAQSLSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCVFC--GAYGEDYFHLFWRCLLVRDLWS
         ++++SGYR+A   +LQ R   S +     WW  +WKL++P +VK F W+L  + LP  A L  R + V   C  C  G Y ED FH  W C + R++W 
Subjt:  IFTMKSGYRLAQSLSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCVFC--GAYGEDYFHLFWRCLLVRDLWS

Query:  QSRFFSLYQSIMLPFFDESVWAVKFQFAVFY----FEVFVLFCWMIWNARNTVLWGGSYDESNLWLR-ASEYTRSFQMANVVCVDTGGWGLLPCGEGGSD
         + F+   Q        E V A   + +       FE F++  W +W  RN+V  GG   ++   L   S++   F+ +N    D             + 
Subjt:  QSRFFSLYQSIMLPFFDESVWAVKFQFAVFY----FEVFVLFCWMIWNARNTVLWGGSYDESNLWLR-ASEYTRSFQMANVVCVDTGGWGLLPCGEGGSD

Query:  AWVPPSGVVLKLNTDASVRLDFGCAGGGVVLRKALGEVLLTGCVILPRCWCVGLAEGWALLEGVRLAMYAGFSCFMVETNSLRLVKIWNGEVVDVSEVGL
         W PP     K+N DA VR + G A    V+R   G V      +L +      AE  A+  G++  +      F VE++ L+ V +   +     +V  
Subjt:  AWVPPSGVVLKLNTDASVRLDFGCAGGGVVLRKALGEVLLTGCVILPRCWCVGLAEGWALLEGVRLAMYAGFSCFMVETNSLRLVKIWNGEVVDVSEVGL

Query:  LLLELRRVVQNVRDFQVSFVSRRGN
        ++  +R ++QNVR   VSFV R  N
Subjt:  LLLELRRVVQNVRDFQVSFVSRRGN

A0A803PEK8 Uncharacterized protein4.7e-9132.92Show/hide
Query:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM
        ++  +S +I+  QSAF+  R + DNAI+G+E +H +R+ +  N    ALKLDM+KAYDRVEW FL+ +M+RLG+D  WVD ++R V+SV FSF +NG+  
Subjt:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM

Query:  GHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFS
        G V+P RGLRQGDPLSP+ FL   E  SNL++  E+   + G R  R    +SHLFF +DSL+F  A     Q  + LL LY  ASGQ +NF KS + F 
Subjt:  GHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFS

Query:  PNT----------------------------------------------GLESQQYIA---------------QILAVARCP------------------
         N                                               GL +Q  +A               Q+L  +  P                  
Subjt:  PNT----------------------------------------------GLESQQYIA---------------QILAVARCP------------------

Query:  SLMWGRELLSRGCHWRIVNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVNDLFTVSSQWDEPKIREHFSAVDCDVILSIPLNNWSGHDVRIWHFAKSG
        SLMWG+++++ G  WR+ NG ++ V    WL    + ++   P LP +  V DL     +WDE  +R  F+  D ++ILS P   W   D  +WH++K+G
Subjt:  SLMWGRELLSRGCHWRIVNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVNDLFTVSSQWDEPKIREHFSAVDCDVILSIPLNNWSGHDVRIWHFAKSG

Query:  IFTMKSGYRLAQSLSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCVFC-GAYGEDYFHLFWRCLLVRDLWSQ
         +T+KSGY++A SL+ +   + S       WW ++W L++P ++K F W+L  N +P  ANL  RG+ + N+C  C G   E   H  W C   ++LW+ 
Subjt:  IFTMKSGYRLAQSLSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCVFC-GAYGEDYFHLFWRCLLVRDLWSQ

Query:  SRFFSLYQSIMLPFFDESVWAVKFQFAVFY----FEVFVLFCWMIWNARNTVLWGGS---YDESNLWLRASEYTRSFQ-----MANVVCVDTGGWGLLPC
        S      +  M     E + +   + A  +    FE F++  W IWN RN V+ GG      +   W R   +   FQ     + + V  +   WG    
Subjt:  SRFFSLYQSIMLPFFDESVWAVKFQFAVFY----FEVFVLFCWMIWNARNTVLWGGS---YDESNLWLRASEYTRSFQ-----MANVVCVDTGGWGLLPC

Query:  GEGGSDAWVPPSGVVLKLNTDASVRLDFGCAGGGVVLRKALGEV
        G+             +KLN DA V+   G +G G V R   G V
Subjt:  GEGGSDAWVPPSGVVLKLNTDASVRLDFGCAGGGVVLRKALGEV

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657504.3e-0921.43Show/hide
Query:  RELLSRGCHWRIVNGLSIPVYGSNWLPNDSSLQVQS--YPSLPSDSCVNDLFTVSSQWDEPKIREHFSAVDCDVILSIPLNNWSGHDVRI-WHFAKSGIF
        R+++S G  W   +G  I  +   W+     L++ +   P+        DL+     WD  KI  + +      + ++ L+  +G   R+ W F++ G F
Subjt:  RELLSRGCHWRIVNGLSIPVYGSNWLPNDSSLQVQS--YPSLPSDSCVNDLFTVSSQWDEPKIREHFSAVDCDVILSIPLNNWSGHDVRI-WHFAKSGIF

Query:  TMKSGYRLAQSLSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCVFCGAYGEDYFHLFWRCLLVRDLW----S
        +++S Y +   L++   P  + +    S++  +WK+RVP  VK F W +    +  +     R +  SN+C  C    E   H+   C     +W     
Subjt:  TMKSGYRLAQSLSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCVFCGAYGEDYFHLFWRCLLVRDLW----S

Query:  QSRFFSLYQSIMLPFFDESVWAVKFQFAVFYFEVFVLFCWMIWNARNTVLWGGSYDESNLWLRASEYTRSFQMANVVCVDTGG--WGLLPCGEGGSDAWV
        Q R    +   +  +  +++        + +  +F +  W  W  R     G  + E+       ++ + + +  V    +G    G+          WV
Subjt:  QSRFFSLYQSIMLPFFDESVWAVKFQFAVFYFEVFVLFCWMIWNARNTVLWGGSYDESNLWLRASEYTRSFQMANVVCVDTGG--WGLLPCGEGGSDAWV

Query:  PPSGVVLKLNTDASVRLDFGCAGGGVVLRKALGEVLLTGCVILPRCWCVGLAEGWALLEGVRLA
         P    +K+NTD + R + G A  G VLR   G       + + RC     AE W +  G+  A
Subjt:  PPSGVVLKLNTDASVRLDFGCAGGGVVLRKALGEVLLTGCVILPRCWCVGLAEGWALLEGVRLA

P11369 LINE-1 retrotransposable element ORF2 protein2.2e-1327.08Show/hide
Query:  LSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKMGHVV
        +  II P+Q  F+P      N       IH + + K  N     + LD  KA+D+++  F+ +++ R G    ++++I    S  + +  +NGEK+  + 
Subjt:  LSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKMGHVV

Query:  PTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSV
           G RQG PLSPY F + +E L+  +R   +   I G ++ +    IS L  ADD +++     +  + + +L+  +    G  IN  KS+
Subjt:  PTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSV

P14381 Transposon TX1 uncharacterized 149 kDa protein8.8e-1026.67Show/hide
Query:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM
        +K +L+++I P+QS  +P R + DN  L  + +H  R+  +     A L LD  KA+DRV+  +L   +    F   +V  +    +S      +N    
Subjt:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM

Query:  GHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKS
          +   RG+RQG PLS   + L +E    LLR       ++G  +      +    +ADD +L  +    + +  +    +Y  AS   IN+ KS
Subjt:  GHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKS

P16423 Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM3.7e-0830.52Show/hide
Query:  PNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKMGHVVPTRGLR
        P Q  FLP     DNA +    +      K   S + A  LD+SKA+D +  + + + +   G  +G+VD +  +      S N +G      VP RG++
Subjt:  PNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKMGHVVPTRGLR

Query:  QGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLF
        QGDPLSP  F L ++ L   L          G +V  +  + +   FADD +LF
Subjt:  QGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLF

P92555 Uncharacterized mitochondrial protein AtMg012502.4e-1556.52Show/hide
Query:  FNLNGEKMGHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDS
        F +NG   G V P+RGLRQGDPLSPY F+LC E LS L R A+    + G RV+ +SP I+HL FADD+
Subjt:  FNLNGEKMGHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDS

Arabidopsis top hitse value%identityAlignment
AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.4e-0432.39Show/hide
Query:  RRSWWLSIW-KLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCVFCGAYGEDYFHLFWRCLLVRDLW
        R  W+ +IW K ++P    F  W    +RL  K  ++  G     LC+FC  + E   HLF+ C   R++W
Subjt:  RRSWWLSIW-KLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCVFCGAYGEDYFHLFWRCLLVRDLW

AT3G09510.1 Ribonuclease H-like superfamily protein3.8e-1622.52Show/hide
Query:  SLMWGRELLSRGCHWRIVNGLSIPVYGSNWLPNDSSLQVQSYPSLP-------SDSCVNDLFTVSSQ---WDEPKIREHFSAVDCDVILSIPLNNWSGHD
        SL+ G  LL +G    I +G +I +   N         V S+P  P        +  +N+LF        WD+ KI +     D   I  I L      D
Subjt:  SLMWGRELLSRGCHWRIVNGLSIPVYGSNWLPNDSSLQVQSYPSLP-------SDSCVNDLFTVSSQ---WDEPKIREHFSAVDCDVILSIPLNNWSGHD

Query:  VRIWHFAKSGIFTMKSGYRLAQSLSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCVFCGAYGEDYFHLFWRC
          IW++  +G +T++SGY L         P  +           IW L +  ++K F WR     L     L  RGM +   C  C    E   H  + C
Subjt:  VRIWHFAKSGIFTMKSGYRLAQSLSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCVFCGAYGEDYFHLFWRC

Query:  LLVRDLWSQSRFFSLYQSIMLPFFDESV-----WAVKFQFAVFYFEVFVLFCWMIWNARNTVLWG-----------GSYDESNLWLRASEYTRSFQMANV
              W  S    +   +M   F+E++     +      + F+  + V   W IW ARN V++             +  E++ WL A++  +       
Subjt:  LLVRDLWSQSRFFSLYQSIMLPFFDESV-----WAVKFQFAVFYFEVFVLFCWMIWNARNTVLWG-----------GSYDESNLWLRASEYTRSFQMANV

Query:  VCVDTGGWGLLPCGEGGSDAWVPPSGVVLKLNTDASVRLDFGCAGGGVVLRKALGEVLLTGCVILPRCWCVGLAEGWALLEGVRLAMYAGFSCFMVETNS
           +                W  P    +K N DA   +    A GG ++R   G  +  G + L        AE  ALL  ++     G++   +E + 
Subjt:  VCVDTGGWGLLPCGEGGSDAWVPPSGVVLKLNTDASVRLDFGCAGGGVVLRKALGEVLLTGCVILPRCWCVGLAEGWALLEGVRLAMYAGFSCFMVETNS

Query:  LRLVKIWNGEVVDVSEVGLLLLELRRVVQNVRDFQVSFVSRRGN
          L+ + NG +   S +   L ++          Q  F+ R+GN
Subjt:  LRLVKIWNGEVVDVSEVGLLLLELRRVVQNVRDFQVSFVSRRGN

AT4G20520.1 RNA binding;RNA-directed DNA polymerases9.3e-1530.34Show/hide
Query:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM
        +K +++ +I P Q++F+P R   DN +   E +H +R RK G   W  LKLD+ KAYDR+ W +L++ ++  GF   W+  I RS     F       ++
Subjt:  MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKM

Query:  GHVVPTR---------GLRQGDPLSPY--RFLLCVEGLSNLLRGA
        G    ++         G R  D  +P+    + C E L  + RG+
Subjt:  GHVVPTR---------GLRQGDPLSPY--RFLLCVEGLSNLLRGA

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)1.7e-1656.52Show/hide
Query:  FNLNGEKMGHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDS
        F +NG   G V P+RGLRQGDPLSPY F+LC E LS L R A+    + G RV+ +SP I+HL FADD+
Subjt:  FNLNGEKMGHVVPTRGLRQGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGGATCTTGTCACAGATTATTACTCCGAATCAGAGTGCTTTCCTCCCGAATCGATGTGTCGTGGATAATGCAATCCTGGGGTTTGAGTGTATCCATGAGTTGAG
GCAGCGTAAGGTAGGTAATTCGAGATGGGCGGCTCTGAAGTTAGATATGAGCAAGGCCTATGATCGGGTGGAGTGGTCTTTTCTGCAGGAGATTATGTTACGACTGGGTT
TTGACCGTGGTTGGGTGGACCTGATTATTCGTTCTGTGAGTTCTGTGATGTTCTCTTTTAATTTGAATGGGGAGAAGATGGGTCATGTAGTCCCAACGCGGGGTCTCCGG
CAGGGGGATCCTCTGTCTCCGTATCGTTTCCTCTTGTGTGTAGAGGGTTTGTCCAATTTGCTTCGTGGTGCAGAACGTCATTCTCTGATATCGGGGTTCCGTGTTGCTAG
GAGTAGTCCGCATATCTCCCATCTGTTCTTCGCTGATGATAGCCTTCTGTTCTTTAAGGCGTCAGCTTCTGAAGGACAGGTTGTGAGAAGTCTATTGTTGTTGTATGAAC
GAGCTTCTGGGCAGACCATTAATTTTGAGAAGTCCGTCATTGCTTTTAGCCCGAACACGGGGTTGGAGTCCCAGCAGTATATCGCCCAGATTCTTGCAGTGGCCCGTTGC
CCGAGCTTGATGTGGGGGCGAGAGTTGCTCTCTAGAGGATGCCACTGGAGGATTGTGAATGGTTTGTCCATTCCAGTCTATGGATCCAATTGGTTACCGAATGACTCGTC
TCTACAGGTTCAGTCTTACCCTTCCTTACCTAGTGATAGTTGTGTTAATGATCTTTTTACGGTTTCTAGTCAATGGGATGAGCCTAAAATTAGGGAGCATTTTTCAGCTG
TGGACTGTGATGTGATTCTTAGCATCCCCCTCAATAATTGGAGTGGTCATGATGTTCGCATTTGGCATTTTGCAAAGTCTGGTATTTTTACTATGAAGAGTGGCTATAGA
TTGGCGCAGAGTTTGAGCCTTCAAGGCCGTCCTTTCTCATCTTATTCGTCAGCTAGGAGGTCTTGGTGGCTTAGTATATGGAAGCTTCGTGTACCTAGTGAAGTCAAGTT
CTTCTTTTGGCGCCTGTGTCTTAACCGACTTCCTTTGAAGGCAAATCTCCTTTGTCGAGGTATGGATGTTTCTAACTTATGTGTTTTCTGTGGGGCGTATGGGGAGGATT
ATTTTCATCTTTTCTGGCGTTGCCTGCTAGTTAGAGACTTGTGGAGTCAGTCACGTTTCTTTTCTCTTTACCAGTCCATTATGTTGCCTTTCTTTGATGAATCTGTGTGG
GCTGTTAAATTTCAATTTGCTGTCTTTTATTTTGAGGTGTTTGTTTTATTCTGCTGGATGATTTGGAATGCAAGGAATACGGTTCTTTGGGGAGGTTCATATGATGAGAG
CAACTTGTGGTTGCGTGCCTCTGAATATACCCGTAGTTTTCAAATGGCAAATGTTGTGTGTGTAGATACAGGTGGTTGGGGTCTTCTTCCATGCGGGGAGGGCGGAAGTG
ATGCTTGGGTGCCCCCTAGTGGTGTGGTTCTAAAACTGAATACAGATGCTTCAGTGAGGCTGGATTTTGGGTGTGCAGGTGGGGGTGTGGTGCTCCGAAAAGCTTTAGGT
GAGGTTCTTCTGACCGGTTGTGTGATTTTGCCACGTTGTTGGTGTGTTGGTCTAGCGGAAGGGTGGGCGTTGTTGGAAGGTGTGAGGTTGGCTATGTATGCAGGGTTCTC
TTGTTTCATGGTGGAGACAAATTCTCTTCGGTTGGTGAAGATTTGGAATGGAGAGGTGGTGGATGTTTCAGAGGTGGGTCTGCTGTTATTGGAACTGCGTCGTGTGGTTC
AGAATGTTCGTGATTTTCAGGTCTCTTTTGTTTCCCGTAGAGGCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGGATCTTGTCACAGATTATTACTCCGAATCAGAGTGCTTTCCTCCCGAATCGATGTGTCGTGGATAATGCAATCCTGGGGTTTGAGTGTATCCATGAGTTGAG
GCAGCGTAAGGTAGGTAATTCGAGATGGGCGGCTCTGAAGTTAGATATGAGCAAGGCCTATGATCGGGTGGAGTGGTCTTTTCTGCAGGAGATTATGTTACGACTGGGTT
TTGACCGTGGTTGGGTGGACCTGATTATTCGTTCTGTGAGTTCTGTGATGTTCTCTTTTAATTTGAATGGGGAGAAGATGGGTCATGTAGTCCCAACGCGGGGTCTCCGG
CAGGGGGATCCTCTGTCTCCGTATCGTTTCCTCTTGTGTGTAGAGGGTTTGTCCAATTTGCTTCGTGGTGCAGAACGTCATTCTCTGATATCGGGGTTCCGTGTTGCTAG
GAGTAGTCCGCATATCTCCCATCTGTTCTTCGCTGATGATAGCCTTCTGTTCTTTAAGGCGTCAGCTTCTGAAGGACAGGTTGTGAGAAGTCTATTGTTGTTGTATGAAC
GAGCTTCTGGGCAGACCATTAATTTTGAGAAGTCCGTCATTGCTTTTAGCCCGAACACGGGGTTGGAGTCCCAGCAGTATATCGCCCAGATTCTTGCAGTGGCCCGTTGC
CCGAGCTTGATGTGGGGGCGAGAGTTGCTCTCTAGAGGATGCCACTGGAGGATTGTGAATGGTTTGTCCATTCCAGTCTATGGATCCAATTGGTTACCGAATGACTCGTC
TCTACAGGTTCAGTCTTACCCTTCCTTACCTAGTGATAGTTGTGTTAATGATCTTTTTACGGTTTCTAGTCAATGGGATGAGCCTAAAATTAGGGAGCATTTTTCAGCTG
TGGACTGTGATGTGATTCTTAGCATCCCCCTCAATAATTGGAGTGGTCATGATGTTCGCATTTGGCATTTTGCAAAGTCTGGTATTTTTACTATGAAGAGTGGCTATAGA
TTGGCGCAGAGTTTGAGCCTTCAAGGCCGTCCTTTCTCATCTTATTCGTCAGCTAGGAGGTCTTGGTGGCTTAGTATATGGAAGCTTCGTGTACCTAGTGAAGTCAAGTT
CTTCTTTTGGCGCCTGTGTCTTAACCGACTTCCTTTGAAGGCAAATCTCCTTTGTCGAGGTATGGATGTTTCTAACTTATGTGTTTTCTGTGGGGCGTATGGGGAGGATT
ATTTTCATCTTTTCTGGCGTTGCCTGCTAGTTAGAGACTTGTGGAGTCAGTCACGTTTCTTTTCTCTTTACCAGTCCATTATGTTGCCTTTCTTTGATGAATCTGTGTGG
GCTGTTAAATTTCAATTTGCTGTCTTTTATTTTGAGGTGTTTGTTTTATTCTGCTGGATGATTTGGAATGCAAGGAATACGGTTCTTTGGGGAGGTTCATATGATGAGAG
CAACTTGTGGTTGCGTGCCTCTGAATATACCCGTAGTTTTCAAATGGCAAATGTTGTGTGTGTAGATACAGGTGGTTGGGGTCTTCTTCCATGCGGGGAGGGCGGAAGTG
ATGCTTGGGTGCCCCCTAGTGGTGTGGTTCTAAAACTGAATACAGATGCTTCAGTGAGGCTGGATTTTGGGTGTGCAGGTGGGGGTGTGGTGCTCCGAAAAGCTTTAGGT
GAGGTTCTTCTGACCGGTTGTGTGATTTTGCCACGTTGTTGGTGTGTTGGTCTAGCGGAAGGGTGGGCGTTGTTGGAAGGTGTGAGGTTGGCTATGTATGCAGGGTTCTC
TTGTTTCATGGTGGAGACAAATTCTCTTCGGTTGGTGAAGATTTGGAATGGAGAGGTGGTGGATGTTTCAGAGGTGGGTCTGCTGTTATTGGAACTGCGTCGTGTGGTTC
AGAATGTTCGTGATTTTCAGGTCTCTTTTGTTTCCCGTAGAGGCAATTAA
Protein sequenceShow/hide protein sequence
MKRILSQIITPNQSAFLPNRCVVDNAILGFECIHELRQRKVGNSRWAALKLDMSKAYDRVEWSFLQEIMLRLGFDRGWVDLIIRSVSSVMFSFNLNGEKMGHVVPTRGLR
QGDPLSPYRFLLCVEGLSNLLRGAERHSLISGFRVARSSPHISHLFFADDSLLFFKASASEGQVVRSLLLLYERASGQTINFEKSVIAFSPNTGLESQQYIAQILAVARC
PSLMWGRELLSRGCHWRIVNGLSIPVYGSNWLPNDSSLQVQSYPSLPSDSCVNDLFTVSSQWDEPKIREHFSAVDCDVILSIPLNNWSGHDVRIWHFAKSGIFTMKSGYR
LAQSLSLQGRPFSSYSSARRSWWLSIWKLRVPSEVKFFFWRLCLNRLPLKANLLCRGMDVSNLCVFCGAYGEDYFHLFWRCLLVRDLWSQSRFFSLYQSIMLPFFDESVW
AVKFQFAVFYFEVFVLFCWMIWNARNTVLWGGSYDESNLWLRASEYTRSFQMANVVCVDTGGWGLLPCGEGGSDAWVPPSGVVLKLNTDASVRLDFGCAGGGVVLRKALG
EVLLTGCVILPRCWCVGLAEGWALLEGVRLAMYAGFSCFMVETNSLRLVKIWNGEVVDVSEVGLLLLELRRVVQNVRDFQVSFVSRRGN