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Lcy05g016920 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g016920
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionzf-RVT domain-containing protein
Genome locationChr05:25509707..25511477
RNA-Seq ExpressionLcy05g016920
SyntenyLcy05g016920
Gene Ontology termsGO:0006139 - nucleobase-containing compound metabolic process (biological process)
GO:0019205 - nucleobase-containing compound kinase activity (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG69422.1 hypothetical protein EZV62_004357 [Acer yangbiense]5.4e-1143.53Show/hide
Query:  DVAAIQRLPISSS-ALDKWLWHYDSKGIYSVKSGYKFSMMKSQEASLSSIEKEISWWKRVWKMKVPGKVKIFIWKLFHNSIPSMV
        DV  I  +PIS S   D  +WH+D  G YSVK+GY  +M+ SQ  S S      + WK +W++ +PGK+KIF+W+  H+ +PS+V
Subjt:  DVAAIQRLPISSS-ALDKWLWHYDSKGIYSVKSGYKFSMMKSQEASLSSIEKEISWWKRVWKMKVPGKVKIFIWKLFHNSIPSMV

TXG72826.1 hypothetical protein EZV62_001405 [Acer yangbiense]7.1e-1136.61Show/hide
Query:  DDSLIFLKAASEDFGQFQSILKDYGQASGYDVAAIQRLPISSSALDKWLWHYDSKGIYSVKSGYKFSMMKSQEASLSSIEKEISWWKRVWKMKVPGKVKI
        + ++ +LK AS ++   +S+++D   A   D A I   P SS++ D+ +WHY S G+YS++SGY  S       S + +    SWWK  W + +P K+K+
Subjt:  DDSLIFLKAASEDFGQFQSILKDYGQASGYDVAAIQRLPISSSALDKWLWHYDSKGIYSVKSGYKFSMMKSQEASLSSIEKEISWWKRVWKMKVPGKVKI

Query:  FIWKLFHNSIPS
        F+WK  HN IP+
Subjt:  FIWKLFHNSIPS

XP_030505314.1 uncharacterized protein LOC115720302 [Cannabis sativa]3.7e-1243.9Show/hide
Query:  DVAAIQRLPISSSAL-DKWLWHYDSKGIYSVKSGYKFSMMKSQEASLSSIEKEISWWKRVWKMKVPGKVKIFIWKLFHNSIP
        D+  I +LP+   A  DK +WH+ + GIYSVKSGY  +    +  S S  + + SWW R WK+K+P K+KIF W+  HN++P
Subjt:  DVAAIQRLPISSSAL-DKWLWHYDSKGIYSVKSGYKFSMMKSQEASLSSIEKEISWWKRVWKMKVPGKVKIFIWKLFHNSIP

XP_030505962.1 uncharacterized protein LOC115720894 [Cannabis sativa]2.4e-1139.53Show/hide
Query:  SGYDVAAIQRLPISSSAL-DKWLWHYDSKGIYSVKSGYKFSMMKSQEASLSSIEKEISWWKRVWKMKVPGKVKIFIWKLFHNSIPS
        S  D+  I  +P+SSS + D+W+WH+ +   Y+V++GY  +    +    +S   + SWWK  W +K+P KVKIF+WK FH +IP+
Subjt:  SGYDVAAIQRLPISSSAL-DKWLWHYDSKGIYSVKSGYKFSMMKSQEASLSSIEKEISWWKRVWKMKVPGKVKIFIWKLFHNSIPS

XP_030509336.1 uncharacterized protein LOC115724021 [Cannabis sativa]6.4e-1238.95Show/hide
Query:  SGYDVAAIQRLPISSSAL-DKWLWHYDSKGIYSVKSGYKFSMMKSQEASLSSIEKEISWWKRVWKMKVPGKVKIFIWKLFHNSIPSMVPSPMVRS
        S  DV  I  +P+SSS++ D+W+WH+ +   Y+V+SGY  +         +S   + +WWK  W +++P KVKIF+WK FH +IP  +P+   RS
Subjt:  SGYDVAAIQRLPISSSAL-DKWLWHYDSKGIYSVKSGYKFSMMKSQEASLSSIEKEISWWKRVWKMKVPGKVKIFIWKLFHNSIPSMVPSPMVRS

TrEMBL top hitse value%identityAlignment
A0A2N9EY44 Uncharacterized protein3.6e-1333.12Show/hide
Query:  GVSIARSCLKISHLFFVDDSLIFLKAASEDFGQFQSILKDYGQASGYDVAAIQ------RLPISSSALDKWLWHYDSKGIYSVKSGYKFSMMKSQEASL-
        G+  +R    +SHLFF DDSL+F KA+  +  +F  IL+ Y ++SG+ ++  +      R      +L +  W     G+++VKS Y      S+E S  
Subjt:  GVSIARSCLKISHLFFVDDSLIFLKAASEDFGQFQSILKDYGQASGYDVAAIQ------RLPISSSALDKWLWHYDSKGIYSVKSGYKFSMMKSQEASL-

Query:  -SSIEKEISW-WKRVWKMKVPGKVKIFIWKLFHNSIPS--------MVPSPMVR
         SS+     W W++ WK+ +PGK+K FIW+ FH S+P+        ++PSP  +
Subjt:  -SSIEKEISW-WKRVWKMKVPGKVKIFIWKLFHNSIPS--------MVPSPMVR

A0A2N9FQ02 Reverse transcriptase domain-containing protein2.1e-1336.64Show/hide
Query:  GVSIARSCLKISHLFFVDDSLIFLKAASEDFGQFQSILKDYGQASGYDVAAIQRLPISSSALDKWLWHYDSKGIYSVKSGYKF--SMMKSQEASLSSIEK
        GV++ R   +I+H FF DDSL+F KA + D  + Q IL  Y +ASG             +  D   W     G Y+V+SGYKF  +M K  + S S+   
Subjt:  GVSIARSCLKISHLFFVDDSLIFLKAASEDFGQFQSILKDYGQASGYDVAAIQRLPISSSALDKWLWHYDSKGIYSVKSGYKF--SMMKSQEASLSSIEK

Query:  EISWWKRVWKMKVPGKVKIFIWKLFHNSIPS
            WK VW ++VP K+++F+W+   +S+PS
Subjt:  EISWWKRVWKMKVPGKVKIFIWKLFHNSIPS

A0A803P3Q4 Uncharacterized protein1.3e-1333.76Show/hide
Query:  GVSIARSCLKISHLFFVDDSLIFLKAASEDFGQFQSILKDYGQASGYDV--------------AAIQR-------LPISS------SALDKWLWHYDSKG
        G  ++R    ISHLFF DDSL+F +A     G  +  L  Y +ASG ++              A +Q        +PIS           +W+WH+    
Subjt:  GVSIARSCLKISHLFFVDDSLIFLKAASEDFGQFQSILKDYGQASGYDV--------------AAIQR-------LPISS------SALDKWLWHYDSKG

Query:  IYSVKSGYKFSM-MKSQEASLSSIEKEISWWKRVWKMKVPGKVKIFIWKLFHNSIPS
         YSV++ Y F+  ++  E S  S  +  +WWK  W +K+P KVKIF WK FH +IP+
Subjt:  IYSVKSGYKFSM-MKSQEASLSSIEKEISWWKRVWKMKVPGKVKIFIWKLFHNSIPS

A0A803QFX1 Uncharacterized protein6.2e-1340.96Show/hide
Query:  DVAAIQRLPISSSAL-DKWLWHYDSKGIYSVKSGYKFSMMKSQEASLSSIEKEISWWKRVWKMKVPGKVKIFIWKLFHNSIPS
        D+ AI  +P+ +    D+W WHY S G Y+VKSGY  ++  + E +  S   + SWW  +WK+K+P KVKIF+W+++H ++P+
Subjt:  DVAAIQRLPISSSAL-DKWLWHYDSKGIYSVKSGYKFSMMKSQEASLSSIEKEISWWKRVWKMKVPGKVKIFIWKLFHNSIPS

A0A803QHW9 Uncharacterized protein9.0e-1230.47Show/hide
Query:  GVSIARSCLKISHLFFVDDSLIFLKAASEDFGQFQSILKDYGQASGYDVAAIQRLPISSSALDKWLWHYDSKGIYSVKSGYKFSMMKSQEASLSSIEKEI
        G+ + R    +SHL F DDSL+F +  +      +  L  Y +AS                 D+ +WH+ +  IY+VKSG+  +    ++   S+ +   
Subjt:  GVSIARSCLKISHLFFVDDSLIFLKAASEDFGQFQSILKDYGQASGYDVAAIQRLPISSSALDKWLWHYDSKGIYSVKSGYKFSMMKSQEASLSSIEKEI

Query:  SWWKRVWKMKVPGKVKIFIWKLFHNSIP
         WWK  W +K+P K+KIF WK+ +++IP
Subjt:  SWWKRVWKMKVPGKVKIFIWKLFHNSIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGGTGTATCCATAGCAAGATCATGTCTTAAGATTTCCCATCTTTTCTTTGTGGACGACAGTCTTATATTCCTTAAAGCGGCGTCCGAGGATTTTGGGCAATTTCA
GTCTATTCTTAAGGACTATGGACAGGCATCTGGTTATGATGTGGCAGCAATTCAACGCTTACCTATAAGCAGTTCAGCTCTGGATAAATGGTTATGGCATTATGATAGTA
AAGGGATATACTCTGTTAAAAGTGGTTACAAGTTTTCGATGATGAAGAGTCAAGAGGCCTCATTGTCAAGTATAGAAAAAGAGATCTCTTGGTGGAAAAGGGTGTGGAAA
ATGAAAGTGCCTGGCAAAGTCAAAATATTCATCTGGAAATTATTCCACAATTCCATTCCTTCTATGGTTCCTAGCCCAATGGTTAGAAGTGAATGGATTAATGATTACCT
GTTAGAGTTCTTGAAGGCCAATCCGAAAAGCGTGTCTACTGCCCAAACGATGGAGGATGTTGGGAATATAATTTCTGACTGGGAAGATCTTATTATGCACACAGATGCAT
CTGTCATGGGAGTGCAAAGCGGCTACCTCTCCTTTGGAAGCGGAAGCTATTGCGGTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGGTGTATCCATAGCAAGATCATGTCTTAAGATTTCCCATCTTTTCTTTGTGGACGACAGTCTTATATTCCTTAAAGCGGCGTCCGAGGATTTTGGGCAATTTCA
GTCTATTCTTAAGGACTATGGACAGGCATCTGGTTATGATGTGGCAGCAATTCAACGCTTACCTATAAGCAGTTCAGCTCTGGATAAATGGTTATGGCATTATGATAGTA
AAGGGATATACTCTGTTAAAAGTGGTTACAAGTTTTCGATGATGAAGAGTCAAGAGGCCTCATTGTCAAGTATAGAAAAAGAGATCTCTTGGTGGAAAAGGGTGTGGAAA
ATGAAAGTGCCTGGCAAAGTCAAAATATTCATCTGGAAATTATTCCACAATTCCATTCCTTCTATGGTTCCTAGCCCAATGGTTAGAAGTGAATGGATTAATGATTACCT
GTTAGAGTTCTTGAAGGCCAATCCGAAAAGCGTGTCTACTGCCCAAACGATGGAGGATGTTGGGAATATAATTTCTGACTGGGAAGATCTTATTATGCACACAGATGCAT
CTGTCATGGGAGTGCAAAGCGGCTACCTCTCCTTTGGAAGCGGAAGCTATTGCGGTGCTTGA
Protein sequenceShow/hide protein sequence
MVGVSIARSCLKISHLFFVDDSLIFLKAASEDFGQFQSILKDYGQASGYDVAAIQRLPISSSALDKWLWHYDSKGIYSVKSGYKFSMMKSQEASLSSIEKEISWWKRVWK
MKVPGKVKIFIWKLFHNSIPSMVPSPMVRSEWINDYLLEFLKANPKSVSTAQTMEDVGNIISDWEDLIMHTDASVMGVQSGYLSFGSGSYCGA