; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy05g017020 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g017020
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionreplication protein A 70 kDa DNA-binding subunit B-like
Genome locationChr05:25990353..25994142
RNA-Seq ExpressionLcy05g017020
SyntenyLcy05g017020
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR013955 - Replication factor A, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025643.1 aspartyl protease family protein 1-like [Cucumis melo var. makuwa]1.5e-1664.86Show/hide
Query:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLM
        G AASFKF+I+H             RFSDSIK I  SEGLPEKH+PGYYA MVH DRL+HGR LA++NGDTPLM
Subjt:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLM

XP_004135019.1 aspartyl protease family protein 1 [Cucumis sativus]1.5e-1664.86Show/hide
Query:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLM
        G AASFKF+I+H             RFSDSIK I  SEGLPEKH+PGYYA MVH DRL+HGR LA++NGDTPLM
Subjt:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLM

XP_022132579.1 aspartyl protease family protein 1-like [Momordica charantia]4.2e-1969.74Show/hide
Query:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLMLI
        GEA SFKFSI+H             RFSDSIKGILDSEGLPEK SPGYYATMVH DRLVHGRRLA++NGD PL  +
Subjt:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLMLI

XP_022926492.1 aspartyl protease family protein 1-like [Cucurbita moschata]2.6e-1668.49Show/hide
Query:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPL
        GEAASFKF+I+H             RFS+SIKGIL SEGLPEKH+P YYATMVH D LV GRRLASSNGDT L
Subjt:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPL

XP_023518254.1 aspartyl protease family protein 1-like [Cucurbita pepo subsp. pepo]5.1e-1769.86Show/hide
Query:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPL
        GEAASFKF+I+H             RFS+SIKGIL SEGLPEKH+P YYATMVH DRLV GRRLASSNGDT L
Subjt:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPL

TrEMBL top hitse value%identityAlignment
A0A0A0KGS0 Peptidase A1 domain-containing protein7.2e-1764.86Show/hide
Query:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLM
        G AASFKF+I+H             RFSDSIK I  SEGLPEKH+PGYYA MVH DRL+HGR LA++NGDTPLM
Subjt:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLM

A0A5A7SLV5 Aspartyl protease family protein 1-like7.2e-1764.86Show/hide
Query:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLM
        G AASFKF+I+H             RFSDSIK I  SEGLPEKH+PGYYA MVH DRL+HGR LA++NGDTPLM
Subjt:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLM

A0A6J1BTF7 aspartyl protease family protein 1-like2.0e-1969.74Show/hide
Query:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLMLI
        GEA SFKFSI+H             RFSDSIKGILDSEGLPEK SPGYYATMVH DRLVHGRRLA++NGD PL  +
Subjt:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLMLI

A0A6J1EEK3 aspartyl protease family protein 1-like1.2e-1668.49Show/hide
Query:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPL
        GEAASFKF+I+H             RFS+SIKGIL SEGLPEKH+P YYATMVH D LV GRRLASSNGDT L
Subjt:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPL

A0A6J1GDN3 aspartyl protease family protein 1-like isoform X24.7e-1663.01Show/hide
Query:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPL
        G+A+SFKFSI+H             RFSD++KGI+DSEG PEKHSP YYAT+VH DRLVHGRRLA+SNG   L
Subjt:  GEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPL

SwissProt top hitse value%identityAlignment
Q8VYV9 Aspartyl protease family protein 12.5e-0650Show/hide
Query:  RFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLMLIS
        RFSD + G+L  +GLP + S  YY  M H DRL+ GRRLA  N D  L+  S
Subjt:  RFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLMLIS

Arabidopsis top hitse value%identityAlignment
AT2G17760.1 Eukaryotic aspartyl protease family protein1.8e-0750Show/hide
Query:  RFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLMLIS
        RFSD + G+L  +GLP + S  YY  M H DRL+ GRRLA  N D  L+  S
Subjt:  RFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLMLIS

AT3G51330.1 Eukaryotic aspartyl protease family protein8.2e-0533.8Show/hide
Query:  AASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPL
        +  F F ++H F D V + L  D            + +PEK S  Y+  +   DRL+ GR LAS+N +TP+
Subjt:  AASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPL

AT3G51340.1 Eukaryotic aspartyl protease family protein2.8e-0532.47Show/hide
Query:  AASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLMLISQD
        +  F F ++H F D V + L  D            + +PE  S  Y+  + H DR + GR LAS+N +TPL  I  +
Subjt:  AASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLMLISQD

AT3G51350.1 Eukaryotic aspartyl protease family protein2.8e-0533.33Show/hide
Query:  VAVSFCFPSCRPTEEWRGEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPL
        + V + F  C  T         F F ++H F DSV + L          G+ D   +PE+ S  Y+  + H DRL+ GR LAS+N +TP+
Subjt:  VAVSFCFPSCRPTEEWRGEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPL

AT3G51360.1 Eukaryotic aspartyl protease family protein8.2e-0534.21Show/hide
Query:  AASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLMLISQ
        + S  F I+H             RFS+ +K +L   GLPE  S  YY  +VH DR   GR+L S+N +   +  +Q
Subjt:  AASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTPLMLISQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCATCAATTTCTCGGAAAATTTTTGGATCCTCTAATCGTCGGTTCCATCACCCAAATGTTGCTGTTTCTTTCTGCTTTCCTTCTTGCCGGCCGACTGAGGAGTG
GCGAGGCGAGGCCGCTTCGTTTAAGTTCAGTATCTACCATCGATTTTTGGATTCGGTTATGAGGATTCTCGACTCTGATCGATTTTCGGATTCGATTAAGGGGATTCTCG
ACTCTGAAGGTTTACCGGAGAAACACAGCCCTGGATATTACGCGACTATGGTCCACCACGATCGGTTAGTTCACGGCCGGCGATTGGCCTCCAGTAATGGTGATACGCCG
CTGATGCTGATTTCACAAGATTGGAAGGCGAGGTTAAAGATTCCACCACTTGATACACGCTATAAAACAGAGCCTCTCAATGTGAGCTACGACCATAGTGCTTTGATGGA
AAATGCCGCAAGGAAGGTGGTGGGGCGGATGTCATTCAAAGTGTGTTTTGGAATGGTCATGAACCAACGAAGGGACAGTTGCAAGCCAATTAAACTGACGCTATGGAACC
CAATAATTTTAGCATTCAATCTTAAGGTAGATAGGTATGAAGGAGAATTAAGCATGACAACAACAATGACGAGCAACATTTTAATTCAGCCAGATTCAAAAGATCTAAAA
GAAAGGAGGAAAATTCTTTTGGATTATACAAACATGTCTACTTTTATTCCTCCCTCTAAAAAAATGGAAAGAGCAAAATTAGTAAGCATCAAAGATATTATTCATGGGTT
AGTTGATGATTTATATTGTTCTATCATTGCCTCAATTGTCAAGATAGTTAACAAAGACAATCCATGGTTTGAGAAATGCAAACTTTGCAACCATAGAGTTTACCCCAATG
GAAATCAGAAAATGACTCACTGTAACAATTGCAATGATCTTGTCCAATTCATTAGAAAATATATGCTAAAGCTTATAATTTTTGATGGGCAAATGACTGCACATATAACT
GCTTTTGAGGCTGCAGAAGTCAGAGTTGGATGTAGTGTTTCCCATATTATGCAACCCAAATTTTGGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCATCAATTTCTCGGAAAATTTTTGGATCCTCTAATCGTCGGTTCCATCACCCAAATGTTGCTGTTTCTTTCTGCTTTCCTTCTTGCCGGCCGACTGAGGAGTG
GCGAGGCGAGGCCGCTTCGTTTAAGTTCAGTATCTACCATCGATTTTTGGATTCGGTTATGAGGATTCTCGACTCTGATCGATTTTCGGATTCGATTAAGGGGATTCTCG
ACTCTGAAGGTTTACCGGAGAAACACAGCCCTGGATATTACGCGACTATGGTCCACCACGATCGGTTAGTTCACGGCCGGCGATTGGCCTCCAGTAATGGTGATACGCCG
CTGATGCTGATTTCACAAGATTGGAAGGCGAGGTTAAAGATTCCACCACTTGATACACGCTATAAAACAGAGCCTCTCAATGTGAGCTACGACCATAGTGCTTTGATGGA
AAATGCCGCAAGGAAGGTGGTGGGGCGGATGTCATTCAAAGTGTGTTTTGGAATGGTCATGAACCAACGAAGGGACAGTTGCAAGCCAATTAAACTGACGCTATGGAACC
CAATAATTTTAGCATTCAATCTTAAGGTAGATAGGTATGAAGGAGAATTAAGCATGACAACAACAATGACGAGCAACATTTTAATTCAGCCAGATTCAAAAGATCTAAAA
GAAAGGAGGAAAATTCTTTTGGATTATACAAACATGTCTACTTTTATTCCTCCCTCTAAAAAAATGGAAAGAGCAAAATTAGTAAGCATCAAAGATATTATTCATGGGTT
AGTTGATGATTTATATTGTTCTATCATTGCCTCAATTGTCAAGATAGTTAACAAAGACAATCCATGGTTTGAGAAATGCAAACTTTGCAACCATAGAGTTTACCCCAATG
GAAATCAGAAAATGACTCACTGTAACAATTGCAATGATCTTGTCCAATTCATTAGAAAATATATGCTAAAGCTTATAATTTTTGATGGGCAAATGACTGCACATATAACT
GCTTTTGAGGCTGCAGAAGTCAGAGTTGGATGTAGTGTTTCCCATATTATGCAACCCAAATTTTGGAGATGA
Protein sequenceShow/hide protein sequence
MSSSISRKIFGSSNRRFHHPNVAVSFCFPSCRPTEEWRGEAASFKFSIYHRFLDSVMRILDSDRFSDSIKGILDSEGLPEKHSPGYYATMVHHDRLVHGRRLASSNGDTP
LMLISQDWKARLKIPPLDTRYKTEPLNVSYDHSALMENAARKVVGRMSFKVCFGMVMNQRRDSCKPIKLTLWNPIILAFNLKVDRYEGELSMTTTMTSNILIQPDSKDLK
ERRKILLDYTNMSTFIPPSKKMERAKLVSIKDIIHGLVDDLYCSIIASIVKIVNKDNPWFEKCKLCNHRVYPNGNQKMTHCNNCNDLVQFIRKYMLKLIIFDGQMTAHIT
AFEAAEVRVGCSVSHIMQPKFWR