; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy05g017230 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g017230
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionla-related protein 6B
Genome locationChr05:27008975..27076313
RNA-Seq ExpressionLcy05g017230
SyntenyLcy05g017230
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0005634 - nucleus (cellular component)
GO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR002344 - Lupus La protein
IPR006630 - La-type HTH domain
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588510.1 La-related protein 6B, partial [Cucurbita argyrosperma subsp. sororia]1.3e-15287.71Show/hide
Query:  MAQHSSSSP-------PDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPG--PPPPPP--KQSPRILIPSPPPPPAIMHVYPPPPPGS
        MA HSSSSP       P   SQSDPSLSRNSSLSRLNAQAPEFVPTR SPRPDLQPP S+ G  PPPPPP  KQSPRILIPSPPPPPA+MHVYPPPPPGS
Subjt:  MAQHSSSSP-------PDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPG--PPPPPP--KQSPRILIPSPPPPPAIMHVYPPPPPGS

Query:  PFHVPIQT--------PVPVPTHVVSIQNHHHYHPHHR-HHHHSHHVPVLYHPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKL
        PFHVPIQ+        PVPVPTHVVSI N HHYHPHHR HHHHSHHVPVLYHPHNPQYYADNGGFH+PD VVQQPQKP  ESDYGAPSRTKLTEEVSQKL
Subjt:  PFHVPIQT--------PVPVPTHVVSIQNHHHYHPHHR-HHHHSHHVPVLYHPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKL

Query:  LNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHC
        LNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMV EDGKKVRRKQPLSESDMEELQSRIVIAENLP+DHC
Subjt:  LNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHC

Query:  HQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVYLF
        HQNLMKIFSAVGSVKNIRTCQPQISD+G SSTSKSAKADGMHYSNK++ F
Subjt:  HQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVYLF

XP_022157471.1 la-related protein 6B [Momordica charantia]7.3e-15689.5Show/hide
Query:  TEPPYSSLSFHQMAQHSSSSPPDSS-SQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPGPPPPPPKQSPRILIPSPPPPPAIMHVYPPPPP
        T P  SS S    +  SSSSP  S+ SQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQP QSAPGPPPPP KQSPRILIPSPPPPP ++HVYPP PP
Subjt:  TEPPYSSLSFHQMAQHSSSSPPDSS-SQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPGPPPPPPKQSPRILIPSPPPPPAIMHVYPPPPP

Query:  GSPFHVPIQTPVPVPTHVVSIQNHHHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEYY
        GSPFHVPIQ+PVPVPT VVSIQN HHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPD VVQQPQKPQ ESDY APSR+KLTEEVSQKLLNQVEYY
Subjt:  GSPFHVPIQTPVPVPTHVVSIQNHHHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEYY

Query:  FSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKI
        FSDLNLATTDHLMRFINKDPDG VPISVVASFKKIKALI+SHSQLANILR SSKLMV EDGKKVRRK PLSESDMEELQSRIVIAENLPEDHCHQNLMKI
Subjt:  FSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKI

Query:  FSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVYLF
        FSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNK++ F
Subjt:  FSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVYLF

XP_022928061.1 la-related protein 6B-like [Cucurbita moschata]2.6e-15389.24Show/hide
Query:  MAQHSSSSP-----PDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPG--PPPPPP--KQSPRILIPSPPPPPAIMHVYPPPPPGSPF
        MA HSSSSP     P   SQSDPSLSRNSSLSRLNAQAPEFVPTR SPRPDLQPP S+ G  PPPPPP  KQSPRILIPSPPPPPA+MHVYPPPPPGSPF
Subjt:  MAQHSSSSP-----PDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPG--PPPPPP--KQSPRILIPSPPPPPAIMHVYPPPPPGSPF

Query:  HVPIQT----PVPVPTHVVSIQNHHHYHPHHR-HHHHSHHVPVLYHPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEY
        HVPIQ+    PVPVPTHVVSI N HHYHPHHR HHHHSHHVPVLYHPHNPQYYADNGGFH+PD VVQQPQKP  ESDYGAPSRTKLTEEVSQKLLNQVEY
Subjt:  HVPIQT----PVPVPTHVVSIQNHHHYHPHHR-HHHHSHHVPVLYHPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEY

Query:  YFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMK
        YFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMV EDGKKVRRKQPLSESDMEELQSRIVIAENLP+DHCHQNLMK
Subjt:  YFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMK

Query:  IFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVYLF
        IFSAVGSVKNIRTCQPQISD+G SSTSKSAKADGMHYSNK++ F
Subjt:  IFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVYLF

XP_022969525.1 la-related protein 6B-like [Cucurbita maxima]2.6e-15388.95Show/hide
Query:  MAQHSSSSP-------PDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPG--PPPPPPKQSPRILIPSPPPPPAIMHVYPPPPPGSPF
        MA HSSSSP       P   SQSDPSLSRNSSLSRLNAQAPEFVPTR SPRPDLQPPQS+ G  PPPPP KQSPRILIPSPPPPPA+MHVYPPPPPGSPF
Subjt:  MAQHSSSSP-------PDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPG--PPPPPPKQSPRILIPSPPPPPAIMHVYPPPPPGSPF

Query:  HVPIQT----PVPVPTHVVSIQNHHHYHPHHR-HHHHSHHVPVLYHPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEY
        HVPIQ+    PVPVPTHVVSI N HHYHPHHR HHHHSHHVPVLYHPHNPQYYADNGGFH+PD VVQQPQKP  ESDYGAPSRTKLT EVSQKLLNQVEY
Subjt:  HVPIQT----PVPVPTHVVSIQNHHHYHPHHR-HHHHSHHVPVLYHPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEY

Query:  YFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMK
        YFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMV EDGKKVRRKQPLSESDMEELQSRIVIAENLP+DHCHQNLMK
Subjt:  YFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMK

Query:  IFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVYLF
        IFSAVGSVKNIRTCQPQISDSG SSTSKSAK DGMHYSNK++ F
Subjt:  IFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVYLF

XP_038888029.1 la-related protein 6B [Benincasa hispida]9.6e-15692.77Show/hide
Query:  MAQHSSSSPPDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPG-PPPPPPKQSPRILIPSPPPPPAIMHVYPPPPPGSPFHVPIQTPV
        MAQHS      SSSQSDPSLSRNSSLSRLNAQAPEFVPTRPS R DLQPPQSAPG PPPPPPKQSPRILIPSPPPPPA+MHVY PPPPGSPFHVPIQTPV
Subjt:  MAQHSSSSPPDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPG-PPPPPPKQSPRILIPSPPPPPAIMHVYPPPPPGSPFHVPIQTPV

Query:  PVPTHVVSIQNHHHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDT-VVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEYYFSDLNLATTDH
        PVPTHVVSIQN HHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFH+PDT VVQQPQKP  ESDY APSR+KLTEEVSQKLLNQVEYYFSDLNLATTDH
Subjt:  PVPTHVVSIQNHHHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDT-VVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEYYFSDLNLATTDH

Query:  LMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIR
        LMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMV EDGKKV+RKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSA GSVKNIR
Subjt:  LMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIR

Query:  TCQPQISDSGASSTSKSAKADGMHYSNKVYLF
        TCQPQISDSGASSTSKSAKADGMHYSNK++ F
Subjt:  TCQPQISDSGASSTSKSAKADGMHYSNKVYLF

TrEMBL top hitse value%identityAlignment
A0A6J1DY71 la-related protein 6B3.5e-15689.5Show/hide
Query:  TEPPYSSLSFHQMAQHSSSSPPDSS-SQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPGPPPPPPKQSPRILIPSPPPPPAIMHVYPPPPP
        T P  SS S    +  SSSSP  S+ SQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQP QSAPGPPPPP KQSPRILIPSPPPPP ++HVYPP PP
Subjt:  TEPPYSSLSFHQMAQHSSSSPPDSS-SQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPGPPPPPPKQSPRILIPSPPPPPAIMHVYPPPPP

Query:  GSPFHVPIQTPVPVPTHVVSIQNHHHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEYY
        GSPFHVPIQ+PVPVPT VVSIQN HHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPD VVQQPQKPQ ESDY APSR+KLTEEVSQKLLNQVEYY
Subjt:  GSPFHVPIQTPVPVPTHVVSIQNHHHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEYY

Query:  FSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKI
        FSDLNLATTDHLMRFINKDPDG VPISVVASFKKIKALI+SHSQLANILR SSKLMV EDGKKVRRK PLSESDMEELQSRIVIAENLPEDHCHQNLMKI
Subjt:  FSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKI

Query:  FSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVYLF
        FSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNK++ F
Subjt:  FSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVYLF

A0A6J1EJ80 la-related protein 6B-like1.3e-15389.24Show/hide
Query:  MAQHSSSSP-----PDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPG--PPPPPP--KQSPRILIPSPPPPPAIMHVYPPPPPGSPF
        MA HSSSSP     P   SQSDPSLSRNSSLSRLNAQAPEFVPTR SPRPDLQPP S+ G  PPPPPP  KQSPRILIPSPPPPPA+MHVYPPPPPGSPF
Subjt:  MAQHSSSSP-----PDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPG--PPPPPP--KQSPRILIPSPPPPPAIMHVYPPPPPGSPF

Query:  HVPIQT----PVPVPTHVVSIQNHHHYHPHHR-HHHHSHHVPVLYHPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEY
        HVPIQ+    PVPVPTHVVSI N HHYHPHHR HHHHSHHVPVLYHPHNPQYYADNGGFH+PD VVQQPQKP  ESDYGAPSRTKLTEEVSQKLLNQVEY
Subjt:  HVPIQT----PVPVPTHVVSIQNHHHYHPHHR-HHHHSHHVPVLYHPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEY

Query:  YFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMK
        YFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMV EDGKKVRRKQPLSESDMEELQSRIVIAENLP+DHCHQNLMK
Subjt:  YFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMK

Query:  IFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVYLF
        IFSAVGSVKNIRTCQPQISD+G SSTSKSAKADGMHYSNK++ F
Subjt:  IFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVYLF

A0A6J1GLH8 la-related protein 6B-like5.8e-15190.06Show/hide
Query:  MAQHSSSSPPDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDL-QPPQSAPGPPPPPPKQSPRILIPS-PPPPPAIMHVYPPPPPGSPFHVPIQTP
        MAQHSSSS   S SQSDPSLSRNSSLSRLNAQAPEFVPTRPS R DL QPP SA GP PPPPKQSPRILIPS PPPPPA+MHVYPPPPPGSPFHVPIQ+P
Subjt:  MAQHSSSSPPDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDL-QPPQSAPGPPPPPPKQSPRILIPS-PPPPPAIMHVYPPPPPGSPFHVPIQTP

Query:  VPVPTHVVSIQNHHHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEYYFSDLNLATTDH
        VPVPTHVVS+QN HHYH HHRHHHHSHHVPVLYHPHNPQYYADNGGFH+PDTVVQQ QKPQ E+DY APSR+KL E+VS KLLNQVEYYFSDLNL TTDH
Subjt:  VPVPTHVVSIQNHHHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEYYFSDLNLATTDH

Query:  LMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIR
        LMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMV EDGKKV+RKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIR
Subjt:  LMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIR

Query:  TCQPQISDSGASSTSKSAKADGMHYSNKVYLF
        TCQPQISDSGASST+KSAKADGMHYS+K++ F
Subjt:  TCQPQISDSGASSTSKSAKADGMHYSNKVYLF

A0A6J1I059 la-related protein 6B-like1.3e-15388.95Show/hide
Query:  MAQHSSSSP-------PDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPG--PPPPPPKQSPRILIPSPPPPPAIMHVYPPPPPGSPF
        MA HSSSSP       P   SQSDPSLSRNSSLSRLNAQAPEFVPTR SPRPDLQPPQS+ G  PPPPP KQSPRILIPSPPPPPA+MHVYPPPPPGSPF
Subjt:  MAQHSSSSP-------PDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPG--PPPPPPKQSPRILIPSPPPPPAIMHVYPPPPPGSPF

Query:  HVPIQT----PVPVPTHVVSIQNHHHYHPHHR-HHHHSHHVPVLYHPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEY
        HVPIQ+    PVPVPTHVVSI N HHYHPHHR HHHHSHHVPVLYHPHNPQYYADNGGFH+PD VVQQPQKP  ESDYGAPSRTKLT EVSQKLLNQVEY
Subjt:  HVPIQT----PVPVPTHVVSIQNHHHYHPHHR-HHHHSHHVPVLYHPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEY

Query:  YFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMK
        YFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMV EDGKKVRRKQPLSESDMEELQSRIVIAENLP+DHCHQNLMK
Subjt:  YFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMK

Query:  IFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVYLF
        IFSAVGSVKNIRTCQPQISDSG SSTSKSAK DGMHYSNK++ F
Subjt:  IFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVYLF

A0A6J1I3E0 la-related protein 6B-like6.9e-15290.66Show/hide
Query:  MAQHSSSSPPDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQ-PPQSAPGPPPPPPKQSPRILIPS-PPPPPAIMHVYPPPPPGSPFHVPIQTP
        MAQHSSSS   S SQSDPSLSRNSSLSRLNAQAPEFVPTRPS R DLQ PP SA GP PPPPKQSPRILIPS PPPPPA+MHVYPPPPPGSPFHVPIQ+P
Subjt:  MAQHSSSSPPDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQ-PPQSAPGPPPPPPKQSPRILIPS-PPPPPAIMHVYPPPPPGSPFHVPIQTP

Query:  VPVPTHVVSIQNHHHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEYYFSDLNLATTDH
        VPVPTHVVS+QN HHYH HHRHHHHSHHVPVLYHPHNPQYYADNGGFH+PDTVVQQ QKPQ E+DY APSR+KLTE+VS KLLNQVEYYFSDLNL TTDH
Subjt:  VPVPTHVVSIQNHHHYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEYYFSDLNLATTDH

Query:  LMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIR
        LMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMV EDGKKV+RKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIR
Subjt:  LMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIR

Query:  TCQPQISDSGASSTSKSAKADGMHYSNKVYLF
        TCQPQISDSGASSTSKSAKADGMHYS+K++ F
Subjt:  TCQPQISDSGASSTSKSAKADGMHYSNKVYLF

SwissProt top hitse value%identityAlignment
O80567 La-related protein 6B4.1e-7753.74Show/hide
Query:  TEPPYSSLSFHQMAQHSSSSPPDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPGPPPPPPKQSPRILIPSPPPPPAIMHVYPPPPPG
        T PP  S        HS+SS   +SS SDPSL R+ SLSRLNA APEFVP R +                PP  Q PR++IP PPPP  ++H+Y   P  
Subjt:  TEPPYSSLSFHQMAQHSSSSPPDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPGPPPPPPKQSPRILIPSPPPPPAIMHVYPPPPPG

Query:  SPFHVPIQTPVPVPTHVVSIQNHHHYHPHHRHHHHSHH-----VPVLYHPHNPQYYADNGGFHEPDTVVQQ-------------PQKPQAESDYGAPSRT
         PF+ P+  PVP+  H+V +QNHH +H  H+HHHH+ H     VPV  H    Q     GG  EPD V ++              Q  +  +     S+T
Subjt:  SPFHVPIQTPVPVPTHVVSIQNHHHYHPHHRHHHHSHH-----VPVLYHPHNPQYYADNGGFHEPDTVVQQ-------------PQKPQAESDYGAPSRT

Query:  KLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIV
         L E+  QK++NQVEYYFSDLNLATTDHLMRFI KDP+GYVPI VVASFKKIKA+IN++SQLA +L+NS+KL V EDGKKVRR  P++ES +EELQSRI+
Subjt:  KLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIV

Query:  IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKS-AKADGMHYSNKVYLF
        +AENLPEDHC+QNLMKIFS VGSVKNIRTCQPQ + SGA   ++S AK+DG  +SNKV+ F
Subjt:  IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKS-AKADGMHYSNKVYLF

Q28G87 La-related protein 72.7e-1229.93Show/hide
Query:  PDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGED
        P   V++ +      D     R+++ +++   +  QV+++F D+NL     L   I K  DGY+ IS++ASF K+K +      +A  ++NSS + +   
Subjt:  PDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGED

Query:  GKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSV
        G K+RR+ PL E   +++ SR V  E LP++  H  + ++F   G V
Subjt:  GKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSV

Q93ZV7 La protein 12.1e-1233.33Show/hide
Query:  LTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALI------------NSHSQLANILRNSSKLMVGEDGKKVRRKQPL--
        LTEE ++ +L QVE+YFSD NL   D L + + +  DG V ++++ SF K++  +            ++   +A+ LR SS L + +DGKKV R   L  
Subjt:  LTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALI------------NSHSQLANILRNSSKLMVGEDGKKVRRKQPL--

Query:  SESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIR
         E  +E+L +R V A     D   +++   FS  G V ++R
Subjt:  SESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIR

Q94A38 La-related protein 6A4.5e-2339.72Show/hide
Query:  EEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAE
        +E++QK++ QVEYYFSD NL T   L+  + ++  G+VPIS +A+F K+K L   H+ + + L+ SS L+V  D KKV+R  PL E  + + +   V+ E
Subjt:  EEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAE

Query:  NLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSK
        NLPEDH ++N+ +IF   GS+K++  C P   +       K
Subjt:  NLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSK

Q9LHL3 La-related protein 6C3.3e-3445.45Show/hide
Query:  HPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQ
        H H+P        F+  +  VQ P    A  +  + S+  L++++  K++ QVEY F+D++L   + + + I+KDP+GYVP+S +AS KKIKAL ++H  
Subjt:  HPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQ

Query:  LANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDS
        ++  LR+SSKL+V EDGKKV+R    ++ D EELQ R V+AENLP+DH +QNL KIF  VG+VK IR C P  S+S
Subjt:  LANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDS

Arabidopsis top hitse value%identityAlignment
AT2G43970.1 RNA-binding protein2.9e-7853.74Show/hide
Query:  TEPPYSSLSFHQMAQHSSSSPPDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPGPPPPPPKQSPRILIPSPPPPPAIMHVYPPPPPG
        T PP  S        HS+SS   +SS SDPSL R+ SLSRLNA APEFVP R +                PP  Q PR++IP PPPP  ++H+Y   P  
Subjt:  TEPPYSSLSFHQMAQHSSSSPPDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPGPPPPPPKQSPRILIPSPPPPPAIMHVYPPPPPG

Query:  SPFHVPIQTPVPVPTHVVSIQNHHHYHPHHRHHHHSHH-----VPVLYHPHNPQYYADNGGFHEPDTVVQQ-------------PQKPQAESDYGAPSRT
         PF+ P+  PVP+  H+V +QNHH +H  H+HHHH+ H     VPV  H    Q     GG  EPD V ++              Q  +  +     S+T
Subjt:  SPFHVPIQTPVPVPTHVVSIQNHHHYHPHHRHHHHSHH-----VPVLYHPHNPQYYADNGGFHEPDTVVQQ-------------PQKPQAESDYGAPSRT

Query:  KLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIV
         L E+  QK++NQVEYYFSDLNLATTDHLMRFI KDP+GYVPI VVASFKKIKA+IN++SQLA +L+NS+KL V EDGKKVRR  P++ES +EELQSRI+
Subjt:  KLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIV

Query:  IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKS-AKADGMHYSNKVYLF
        +AENLPEDHC+QNLMKIFS VGSVKNIRTCQPQ + SGA   ++S AK+DG  +SNKV+ F
Subjt:  IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKS-AKADGMHYSNKVYLF

AT2G43970.2 RNA-binding protein1.9e-7753.91Show/hide
Query:  TEPPYSSLSFHQMAQHSSSSPPDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPGPPPPPPKQSPRILIPSPPPPPAIMHVYPPPPPG
        T PP  S        HS+SS   +SS SDPSL R+ SLSRLNA APEFVP R +                PP  Q PR++IP PPPP  ++H+Y   P  
Subjt:  TEPPYSSLSFHQMAQHSSSSPPDSSSQSDPSLSRNSSLSRLNAQAPEFVPTRPSPRPDLQPPQSAPGPPPPPPKQSPRILIPSPPPPPAIMHVYPPPPPG

Query:  SPFHVPIQTPVPVPTHVVSIQNHHHYHPHHRHHHHSHH-----VPVLYHPHNPQYYADNGGFHEPDTVVQQ-------------PQKPQAESDYGAPSRT
         PF+ P+  PVP+  H+V +QNHH +H  H+HHHH+ H     VPV  H    Q     GG  EPD V ++              Q  +  +     S+T
Subjt:  SPFHVPIQTPVPVPTHVVSIQNHHHYHPHHRHHHHSHH-----VPVLYHPHNPQYYADNGGFHEPDTVVQQ-------------PQKPQAESDYGAPSRT

Query:  KLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIV
         L E+  QK++NQVEYYFSDLNLATTDHLMRFI KDP+GYVPI VVASFKKIKA+IN++SQLA +L+NS+KL V EDGKKVRR  P++ES +EELQSRI+
Subjt:  KLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIV

Query:  IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKS-AKADGMHYSNKV
        +AENLPEDHC+QNLMKIFS VGSVKNIRTCQPQ + SGA   ++S AK+DG  +SNKV
Subjt:  IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKS-AKADGMHYSNKV

AT3G19090.1 RNA-binding protein2.3e-3545.45Show/hide
Query:  HPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQ
        H H+P        F+  +  VQ P    A  +  + S+  L++++  K++ QVEY F+D++L   + + + I+KDP+GYVP+S +AS KKIKAL ++H  
Subjt:  HPHNPQYYADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQ

Query:  LANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDS
        ++  LR+SSKL+V EDGKKV+R    ++ D EELQ R V+AENLP+DH +QNL KIF  VG+VK IR C P  S+S
Subjt:  LANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDS

AT5G46250.1 RNA-binding protein3.2e-2439.72Show/hide
Query:  EEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAE
        +E++QK++ QVEYYFSD NL T   L+  + ++  G+VPIS +A+F K+K L   H+ + + L+ SS L+V  D KKV+R  PL E  + + +   V+ E
Subjt:  EEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAE

Query:  NLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSK
        NLPEDH ++N+ +IF   GS+K++  C P   +       K
Subjt:  NLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSK

AT5G46250.2 RNA-binding protein3.2e-2439.72Show/hide
Query:  EEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAE
        +E++QK++ QVEYYFSD NL T   L+  + ++  G+VPIS +A+F K+K L   H+ + + L+ SS L+V  D KKV+R  PL E  + + +   V+ E
Subjt:  EEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGKKVRRKQPLSESDMEELQSRIVIAE

Query:  NLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSK
        NLPEDH ++N+ +IF   GS+K++  C P   +       K
Subjt:  NLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGAGAGAGGCAAGGAGAATTCATTAAATAGAAGCATGAAATGCTACGTACTCCCACAAGTCGTTCTAAGGCCGGAGCATTGCGGGGAAGACACTGGTCCACACAC
CACTCGTGATCAAAGAAACCTCAAGAAGTTGTTGAATCGGTCTCCAAAAGAGGACACTCTGTGTTCCTCTCGGACTCGATCTCCAGATTTTCAGTTCACAGAACCTCCAT
ATTCATCTCTTTCCTTCCACCAAATGGCACAACATTCTTCCTCTTCGCCTCCCGATTCCTCTTCCCAATCCGATCCATCTCTTTCTCGCAACTCTTCTCTCAGTCGTCTC
AACGCCCAGGCTCCTGAGTTCGTCCCCACTCGCCCCTCCCCTCGTCCCGATCTACAACCGCCGCAGTCCGCCCCCGGCCCCCCGCCTCCTCCGCCCAAGCAATCGCCCCG
GATTCTCATCCCTTCTCCTCCTCCGCCGCCGGCCATCATGCATGTTTATCCTCCCCCTCCCCCGGGATCTCCCTTCCATGTTCCCATTCAGACCCCTGTCCCCGTCCCCA
CTCATGTCGTTTCCATTCAGAATCATCATCACTATCACCCTCATCACCGCCACCACCATCATTCCCATCATGTTCCTGTGCTTTATCACCCTCATAATCCTCAGTATTAT
GCCGATAATGGTGGATTCCATGAGCCCGACACCGTTGTGCAGCAACCTCAGAAGCCACAGGCTGAGTCCGACTATGGTGCTCCATCGAGGACTAAACTCACTGAGGAAGT
CTCCCAAAAGCTTTTGAATCAGGTGGAATATTATTTCAGTGATTTAAACTTGGCAACTACTGATCATTTGATGAGGTTCATCAATAAAGATCCCGATGGATATGTGCCTA
TATCGGTTGTTGCATCATTCAAGAAGATTAAGGCTCTCATTAATAGTCACTCTCAGCTAGCCAATATTTTGCGCAACTCTTCTAAGCTTATGGTTGGTGAAGATGGAAAG
AAAGTTAGACGTAAACAACCACTTTCAGAGTCAGATATGGAGGAGCTGCAATCTCGCATAGTAATTGCGGAGAACTTACCCGAGGATCATTGCCACCAAAACCTCATGAA
GATTTTTTCTGCTGTTGGGAGTGTTAAGAATATTCGAACTTGTCAACCTCAAATCTCAGATAGTGGAGCTTCTTCAACATCTAAATCAGCAAAAGCTGATGGAATGCATT
ACAGTAACAAGGTATACTTATTTGCTGTAGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGATAGAGAGAGGCAAGGAGAATTCATTAAATAGAAGCATGAAATGCTACGTACTCCCACAAGTCGTTCTAAGGCCGGAGCATTGCGGGGAAGACACTGGTCCACACAC
CACTCGTGATCAAAGAAACCTCAAGAAGTTGTTGAATCGGTCTCCAAAAGAGGACACTCTGTGTTCCTCTCGGACTCGATCTCCAGATTTTCAGTTCACAGAACCTCCAT
ATTCATCTCTTTCCTTCCACCAAATGGCACAACATTCTTCCTCTTCGCCTCCCGATTCCTCTTCCCAATCCGATCCATCTCTTTCTCGCAACTCTTCTCTCAGTCGTCTC
AACGCCCAGGCTCCTGAGTTCGTCCCCACTCGCCCCTCCCCTCGTCCCGATCTACAACCGCCGCAGTCCGCCCCCGGCCCCCCGCCTCCTCCGCCCAAGCAATCGCCCCG
GATTCTCATCCCTTCTCCTCCTCCGCCGCCGGCCATCATGCATGTTTATCCTCCCCCTCCCCCGGGATCTCCCTTCCATGTTCCCATTCAGACCCCTGTCCCCGTCCCCA
CTCATGTCGTTTCCATTCAGAATCATCATCACTATCACCCTCATCACCGCCACCACCATCATTCCCATCATGTTCCTGTGCTTTATCACCCTCATAATCCTCAGTATTAT
GCCGATAATGGTGGATTCCATGAGCCCGACACCGTTGTGCAGCAACCTCAGAAGCCACAGGCTGAGTCCGACTATGGTGCTCCATCGAGGACTAAACTCACTGAGGAAGT
CTCCCAAAAGCTTTTGAATCAGGTGGAATATTATTTCAGTGATTTAAACTTGGCAACTACTGATCATTTGATGAGGTTCATCAATAAAGATCCCGATGGATATGTGCCTA
TATCGGTTGTTGCATCATTCAAGAAGATTAAGGCTCTCATTAATAGTCACTCTCAGCTAGCCAATATTTTGCGCAACTCTTCTAAGCTTATGGTTGGTGAAGATGGAAAG
AAAGTTAGACGTAAACAACCACTTTCAGAGTCAGATATGGAGGAGCTGCAATCTCGCATAGTAATTGCGGAGAACTTACCCGAGGATCATTGCCACCAAAACCTCATGAA
GATTTTTTCTGCTGTTGGGAGTGTTAAGAATATTCGAACTTGTCAACCTCAAATCTCAGATAGTGGAGCTTCTTCAACATCTAAATCAGCAAAAGCTGATGGAATGCATT
ACAGTAACAAGGTATACTTATTTGCTGTAGCATAG
Protein sequenceShow/hide protein sequence
MIERGKENSLNRSMKCYVLPQVVLRPEHCGEDTGPHTTRDQRNLKKLLNRSPKEDTLCSSRTRSPDFQFTEPPYSSLSFHQMAQHSSSSPPDSSSQSDPSLSRNSSLSRL
NAQAPEFVPTRPSPRPDLQPPQSAPGPPPPPPKQSPRILIPSPPPPPAIMHVYPPPPPGSPFHVPIQTPVPVPTHVVSIQNHHHYHPHHRHHHHSHHVPVLYHPHNPQYY
ADNGGFHEPDTVVQQPQKPQAESDYGAPSRTKLTEEVSQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVGEDGK
KVRRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKVYLFAVA