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Lcy05g020010 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy05g020010
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description60S ribosomal protein L11
Genome locationChr05:44158597..44160312
RNA-Seq ExpressionLcy05g020010
SyntenyLcy05g020010
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002132 - Ribosomal protein L5
IPR022803 - Ribosomal protein L5 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFP80307.1 60S ribosomal protein l11 [Phtheirospermum japonicum]7.3e-0975Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
        VGR RRCKSR+GIQH+VTKEDAMKW QVKYEG +L++ +N
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
GFP83875.1 60S ribosomal protein l11-2 [Phtheirospermum japonicum]8.6e-1077.5Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
        VGRHRRCKSR+GIQH+VTKEDAMKW QVKYEG +L++ +N
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
KAF3961778.1 hypothetical protein CMV_013637 [Castanea mollissima]1.9e-0972.92Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN-TVVVELG
        VGR RRCKSR+GIQH+VTKEDAMKW QVKYEG +L++  N TV+ ELG
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN-TVVVELG
XP_011081868.1 60S ribosomal protein L11 [Sesamum indicum]7.3e-0975Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
        VGR RRCKSR+GIQH+VTKEDAMKW QVKYEG +L++ +N
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
XP_031380746.1 60S ribosomal protein L11-1 [Punica granatum]5.6e-0975.61Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVANT
        VGR RRCKSR+GIQH+VTKEDAMKW QVKYEG +L++  NT
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVANT
TrEMBL top hitse value%identityAlignment
A0A218X0L8 60S ribosomal protein L11-12.7e-0975.61Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVANT
        VGR RRCKSR+GIQH+VTKEDAMKW QVKYEG +L++  NT
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVANT
A0A2G9H9K5 60S ribosomal protein L113.5e-0975Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
        VGR RRCKSR+GIQH+VTKEDAMKW QVKYEG +L++ +N
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
A0A2G9HZI1 60S ribosomal protein L113.5e-0975Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
        VGR RRCKSR+GIQH+VTKEDAMKW QVKYEG +L++ +N
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
A0A5A7PIM8 60S ribosomal protein L113.5e-0975Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
        VGR RRCKSR+GIQH+VTKEDAMKW QVKYEG +L++ +N
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
A0A5A7R673 60S ribosomal protein L113.5e-0961.54Show/hide
Query:  NVNSSIKNNKENVGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
        +++  IK     VGR RRCKSR+GIQH+VTKEDAMKW QVKYEG +L++ +N
Subjt:  NVNSSIKNNKENVGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
SwissProt top hitse value%identityAlignment
A2YDY2 60S ribosomal protein L111.4e-1073.81Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEV-ANT
        V R RRCKSR+GIQH+VTKEDAMKW QVKYEG +L++  ANT
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEV-ANT
P42794 60S ribosomal protein L11-26.9e-1067.5Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
        V R RRCK+R+GIQH+VTK+DAMKW QVKYEG +L++  N
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
P42795 60S ribosomal protein L11-16.9e-1067.5Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
        V R RRCK+R+GIQH+VTK+DAMKW QVKYEG +L++  N
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
P46287 60S ribosomal protein L113.1e-1072.97Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDE
        VGR RRCK+R+GIQH+VTK+DAMKW QVKYEG +L++
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDE
Q0DK10 60S ribosomal protein L111.4e-1073.81Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEV-ANT
        V R RRCKSR+GIQH+VTKEDAMKW QVKYEG +L++  ANT
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEV-ANT
Arabidopsis top hitse value%identityAlignment
AT2G42740.1 ribosomal protein large subunit 16A4.9e-1167.5Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
        V R RRCK+R+GIQH+VTK+DAMKW QVKYEG +L++  N
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
AT3G58700.1 Ribosomal L5P family protein4.9e-1167.5Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
        V R RRCK+R+GIQH+VTK+DAMKW QVKYEG +L++  N
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
AT4G18730.1 ribosomal protein L16B4.9e-1167.5Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
        V R RRCK+R+GIQH+VTK+DAMKW QVKYEG +L++  N
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
AT5G45775.1 Ribosomal L5P family protein4.9e-1167.5Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
        V R RRCK+R+GIQH+VTK+DAMKW QVKYEG +L++  N
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
AT5G45775.2 Ribosomal L5P family protein4.9e-1167.5Show/hide
Query:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN
        V R RRCK+R+GIQH+VTK+DAMKW QVKYEG +L++  N
Subjt:  VGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVAN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATAGGGAAAAGCAACCAGGAAGACGAAGAGTACGATGAGGACGAGCTGGTTGCTAAAAGGGAGAGGCCTTCTTCTACTTCCAATGTTAATAGTAGCATCAAAAA
CAACAAAGAAAATGTTGGGCGTCACAGGAGGTGCAAGTCTCGCATTGGGATCCAGCACAAAGTCACAAAGGAGGATGCCATGAAGTGGCTCCAGGTGAAATATGAAGGTA
CTTTGTTGGATGAAGTGGCTAATACTGTAGTAGTTGAGCTTGGTGAAGGTCAACTTGTTGTATACTTCTCCATATGTTGCAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATAGGGAAAAGCAACCAGGAAGACGAAGAGTACGATGAGGACGAGCTGGTTGCTAAAAGGGAGAGGCCTTCTTCTACTTCCAATGTTAATAGTAGCATCAAAAA
CAACAAAGAAAATGTTGGGCGTCACAGGAGGTGCAAGTCTCGCATTGGGATCCAGCACAAAGTCACAAAGGAGGATGCCATGAAGTGGCTCCAGGTGAAATATGAAGGTA
CTTTGTTGGATGAAGTGGCTAATACTGTAGTAGTTGAGCTTGGTGAAGGTCAACTTGTTGTATACTTCTCCATATGTTGCAGGTGA
Protein sequenceShow/hide protein sequence
MGIGKSNQEDEEYDEDELVAKRERPSSTSNVNSSIKNNKENVGRHRRCKSRIGIQHKVTKEDAMKWLQVKYEGTLLDEVANTVVVELGEGQLVVYFSICCR