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Lcy06g004100 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g004100
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionProtein TIC 214
Genome locationChr06:3783073..3783351
RNA-Seq ExpressionLcy06g004100
SyntenyLcy06g004100
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009528 - plastid inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KZV45020.1 membrane protein ycf1 [Dorcoceras hygrometricum]1.0e-1770.83Show/hide
Query:  MHEDNQFDRCGRTLLWISDHSLSIGPSYLFLLRARVMGRRNREESISNNRFYFGIAHDVHIDLLCASASSIG
        MHEDNQF RCGRTLLWIS+H L      L    +   GRRNREE ISNN FY+G AHDVHIDLLCASASSIG
Subjt:  MHEDNQFDRCGRTLLWISDHSLSIGPSYLFLLRARVMGRRNREESISNNRFYFGIAHDVHIDLLCASASSIG

QGW48450.1 hypothetical protein [Raphanus sativus]8.7e-1768.83Show/hide
Query:  MHEDNQFDRCGRTLLWISDHSLSIGPSYLFLLRARVMG-----RRNREESISNNRFYFGIAHDVHIDLLCASASSIG
        MHEDNQF RCGRTLLWISDH L      L  L +   G     RRNREESISNN FY G AHDVHIDLLCASA SIG
Subjt:  MHEDNQFDRCGRTLLWISDHSLSIGPSYLFLLRARVMG-----RRNREESISNNRFYFGIAHDVHIDLLCASASSIG

YP_009239402.1 Ycf1 [Dendrobium pendulum]1.1e-1969.62Show/hide
Query:  MHEDNQFDRCGRTLLWISDHSLSIGPSYLFLLRARVMGRRNREESISNNRFYFGIAHDVHIDLLCASASSIGYTSYNNC
        MHEDN+F RCGR LLWISDH L      L    +   GRRNRE  ISNN FY G AHDVHIDLLCASASSIG TSYNNC
Subjt:  MHEDNQFDRCGRTLLWISDHSLSIGPSYLFLLRARVMGRRNREESISNNRFYFGIAHDVHIDLLCASASSIGYTSYNNC

YP_009561670.1 hypothetical chloroplast RF19 [Commiphora gileadensis]5.8e-2170.24Show/hide
Query:  MHEDNQFDRCGRTLLWISDHSLSIGPSYLFLLRARVMG-----RRNREESISNNRFYFGIAHDVHIDLLCASASSIGYTSYNNC
        MHEDNQF RCGRTLLWISDH L      L  L +   G     RRNREE ISNN FY G AHDVHIDLLCASASSIG TSYNNC
Subjt:  MHEDNQFDRCGRTLLWISDHSLSIGPSYLFLLRARVMG-----RRNREESISNNRFYFGIAHDVHIDLLCASASSIGYTSYNNC

YP_009724465.1 hypothetical chloroplast RF19 [Senegalia senegal]1.8e-2271.6Show/hide
Query:  MHEDNQFDRCGRTLLWISDHSLSIGPSYLFLLRARVMGRRNREESISNNRFYFGIAHDVHIDLLCASASSIGYTSYNNCEN
        MHEDN F RCGRTLLWISDH L      L    +   GRRNREESISNN FY+G AHDVHIDLLCA ASSIGYTSYNNC +
Subjt:  MHEDNQFDRCGRTLLWISDHSLSIGPSYLFLLRARVMGRRNREESISNNRFYFGIAHDVHIDLLCASASSIGYTSYNNCEN

TrEMBL top hitse value%identityAlignment
A0A140G127 Protein TIC 2145.3e-2069.62Show/hide
Query:  MHEDNQFDRCGRTLLWISDHSLSIGPSYLFLLRARVMGRRNREESISNNRFYFGIAHDVHIDLLCASASSIGYTSYNNC
        MHEDN+F RCGR LLWISDH L      L    +   GRRNRE  ISNN FY G AHDVHIDLLCASASSIG TSYNNC
Subjt:  MHEDNQFDRCGRTLLWISDHSLSIGPSYLFLLRARVMGRRNREESISNNRFYFGIAHDVHIDLLCASASSIGYTSYNNC

A0A410PAD6 Protein TIC 2142.8e-2170.24Show/hide
Query:  MHEDNQFDRCGRTLLWISDHSLSIGPSYLFLLRARVMG-----RRNREESISNNRFYFGIAHDVHIDLLCASASSIGYTSYNNC
        MHEDNQF RCGRTLLWISDH L      L  L +   G     RRNREE ISNN FY G AHDVHIDLLCASASSIG TSYNNC
Subjt:  MHEDNQFDRCGRTLLWISDHSLSIGPSYLFLLRARVMG-----RRNREESISNNRFYFGIAHDVHIDLLCASASSIGYTSYNNC

A0A650F2E1 Hypothetical chloroplast RF198.7e-2371.6Show/hide
Query:  MHEDNQFDRCGRTLLWISDHSLSIGPSYLFLLRARVMGRRNREESISNNRFYFGIAHDVHIDLLCASASSIGYTSYNNCEN
        MHEDN F RCGRTLLWISDH L      L    +   GRRNREESISNN FY+G AHDVHIDLLCA ASSIGYTSYNNC +
Subjt:  MHEDNQFDRCGRTLLWISDHSLSIGPSYLFLLRARVMGRRNREESISNNRFYFGIAHDVHIDLLCASASSIGYTSYNNCEN

A0A6N2K3S4 Uncharacterized protein2.6e-1970.89Show/hide
Query:  MHEDNQFDRCGRTLLWISDH----SLSIGPSYLFLLRARVMGRRNREESISNNRFYFGIAHDVHIDLLCASASSIGYTS
        MHEDNQF RCGRTLLWISDH    +L   PS     R R   RRNREE ISNNRFY+G AHDVHIDLLCASASSIG  S
Subjt:  MHEDNQFDRCGRTLLWISDH----SLSIGPSYLFLLRARVMGRRNREESISNNRFYFGIAHDVHIDLLCASASSIGYTS

A0A6N2MXI1 Uncharacterized protein4.5e-1972.37Show/hide
Query:  MHEDNQFDRCGRTLLWISDH----SLSIGPSYLFLLRARVMGRRNREESISNNRFYFGIAHDVHIDLLCASASSIG
        MHEDNQF RCGRTLLWISDH    +L   PS     R R   RRNREE ISNNRFY+G AHDVHIDLLCASASSIG
Subjt:  MHEDNQFDRCGRTLLWISDH----SLSIGPSYLFLLRARVMGRRNREESISNNRFYFGIAHDVHIDLLCASASSIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGAAGATAATCAATTCGATCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACAGTCTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTAT
GGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTTCGGGATAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTATA
CCTCATACAATAACTGTGAAAATTTGGAGACTAAAGTGAGATTTAAACCTACATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATGAAGATAATCAATTCGATCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACAGTCTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTAT
GGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTTCGGGATAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTATA
CCTCATACAATAACTGTGAAAATTTGGAGACTAAAGTGAGATTTAAACCTACATTTTAA
Protein sequenceShow/hide protein sequence
MHEDNQFDRCGRTLLWISDHSLSIGPSYLFLLRARVMGRRNREESISNNRFYFGIAHDVHIDLLCASASSIGYTSYNNCENLETKVRFKPTF