; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g004490 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g004490
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRPM1-interacting protein 4-like
Genome locationChr06:4227172..4229297
RNA-Seq ExpressionLcy06g004490
SyntenyLcy06g004490
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152507.2 protein NOI4 [Cucumis sativus]7.2e-2686.96Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK
        MASQDKGR LPKFG+WDVNNPASAEGFTVIFNKAR+EKKTTGTAANMV  +RNE  +NNESYPQYPPPK
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK

XP_008439256.1 PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo]3.2e-2686.96Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK
        MASQD+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG AANMV  +RNE  +NNESYPQYPPPK
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK

XP_022954832.1 RPM1-interacting protein 4-like [Cucurbita moschata]1.6e-2586.96Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK
        MA QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG+ ANMVS Q NE  YNNES+PQ PPPK
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK

XP_038894676.1 protein NOI4 isoform X1 [Benincasa hispida]2.8e-2586.96Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK
        MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTGTAAN V  Q +E  +NNESYPQYPPPK
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK

XP_038894677.1 protein NOI4 isoform X2 [Benincasa hispida]2.8e-2586.96Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK
        MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTGTAAN V  Q +E  +NNESYPQYPPPK
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK

TrEMBL top hitse value%identityAlignment
A0A0A0LRE5 AvrRpt-cleavage domain-containing protein3.5e-2686.96Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK
        MASQDKGR LPKFG+WDVNNPASAEGFTVIFNKAR+EKKTTGTAANMV  +RNE  +NNESYPQYPPPK
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK

A0A1S3AZ04 RPM1-interacting protein 4 isoform X11.6e-2686.96Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK
        MASQD+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG AANMV  +RNE  +NNESYPQYPPPK
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK

A0A6J1C5Z3 uncharacterized protein LOC111008714 isoform X23.9e-2586.36Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK
        +D+GRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAA+ VSPQRNE+ YNNE++PQY PPK
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK

A0A6J1C6I4 uncharacterized protein LOC111008714 isoform X11.7e-2587.88Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK
        QD+GRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAA+ VSPQRNE+ YNNE++PQY PPK
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK

A0A6J1GRZ4 RPM1-interacting protein 4-like7.8e-2686.96Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK
        MA QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG+ ANMVS Q NE  YNNES+PQ PPPK
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPK

SwissProt top hitse value%identityAlignment
O22633 Protein NOI47.8e-1555.7Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDY--NNESYPQYPPPK--VCSIEDPRIN
        DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G      SP ++   +  +    P  P PK  +C ++ P ++
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDY--NNESYPQYPPPK--VCSIEDPRIN

Q8GYN5 RPM1-interacting protein 45.1e-0642.37Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNES
        S +K   +PKFG+WD NNP+SA+G+T IFNK R+E+    + AN+    R  T  ++ +
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNES

Arabidopsis top hitse value%identityAlignment
AT3G48450.1 RPM1-interacting protein 4 (RIN4) family protein2.1e-1561.54Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAA----NMVSPQRNETDYNNES
        MA+ ++ RPLPKFGEWD  NP SAEGFTVIFNKARD+KKT  TA     ++VSP RNE    N +
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAA----NMVSPQRNETDYNNES

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein2.1e-1594.74Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG
        DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein1.6e-1592.31Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG
        +DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein4.2e-1655Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDY--NNESYPQYPPPK--VCSIEDPRIN
        +DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G      SP ++   +  +    P  P PK  +C ++ P ++
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDY--NNESYPQYPPPK--VCSIEDPRIN

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein3.8e-1763.89Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT---TGTAAN-MVSPQRNE-TDYNNESYPQYPPPK
        +++KG+PLPKFGEWDVNNPASAEGFTVIF+KA DEKKT   +G   N +VSPQRN+ +D NN    Q P  K
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT---TGTAAN-MVSPQRNE-TDYNNESYPQYPPPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGCAGGACAAGGGTCGTCCATTGCCAAAGTTTGGTGAATGGGATGTAAATAATCCTGCATCTGCAGAAGGATTTACGGTAATATTTAACAAGGCTAGA
GATGAGAAGAAGACTACTGGAACTGCTGCTAATATGGTTTCACCACAAAGAAATGAAACTGACTATAACAATGAAAGTTACCCTCAGTATCCTCCACCGAAGGTC
TGTTCAATAGAAGACCCGAGAATCAATTTCGTTCTAGATATCTTAAGTCTAATCTATTTTTTGGTATTTGGATGCAGAAGAGGTGGTTTTGCTGTGTTTGAAGCC
ACAGTGGTTTCAGGATCTTGA
mRNA sequenceShow/hide mRNA sequence
CGTTTCGATCTCAACTCTATTTCTCTCTCTAAGAAATTCTGTGTGTTCTTGTACGGTTTTCCATCCTATATTTTGCTTGCACTCTCAAATTTTTTCTTTTCCGTT
TCTGGTCTCCTCGTATCCGATCCCCCGCCCTGCGTCCTGCAATCATGGCATCGCAGGACAAGGGTCGTCCATTGCCAAAGTTTGGTGAATGGGATGTAAATAATC
CTGCATCTGCAGAAGGATTTACGGTAATATTTAACAAGGCTAGAGATGAGAAGAAGACTACTGGAACTGCTGCTAATATGGTTTCACCACAAAGAAATGAAACTG
ACTATAACAATGAAAGTTACCCTCAGTATCCTCCACCGAAGGTCTGTTCAATAGAAGACCCGAGAATCAATTTCGTTCTAGATATCTTAAGTCTAATCTATTTTT
TGGTATTTGGATGCAGAAGAGGTGGTTTTGCTGTGTTTGAAGCCACAGTGGTTTCAGGATCTTGAATTTGTGTAATCTATTGTGAAAGTCCGTAAAATTTGAGAG
CCCTATCCAACCGTGGACCTGTTGATCCCAACAAAGTTGTTGCACCATCAACAAATGACTAAATGACTCATACTATTCATTTTCCCTTTTCACTTTGGCTTTCAT
GCTTTATCGACGTAATATTATAATTTATATCACATATTATTCTTTTTATTTGTATTGTAATACAGGATAGAAAAACAAGTTACATTGTCAAAGTCGTGTTTCAAT
CTCATGATGTTCTTTATGTCGACATATGGTGGAAGGATTCTGATGGGAACTCAATTTATACATATAAATTAG
Protein sequenceShow/hide protein sequence
MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQRNETDYNNESYPQYPPPKVCSIEDPRINFVLDILSLIYFLVFGCRRGGFAVFEA
TVVSGS