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Lcy06g006070 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g006070
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPatatin
Genome locationChr06:5699349..5699741
RNA-Seq ExpressionLcy06g006070
SyntenyLcy06g006070
Gene Ontology termsGO:0000162 - tryptophan biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584077.1 hypothetical protein SDJN03_20009, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4283.48Show/hide
Query:  MAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKIC-SAFDVSESNRLNKISG
        MAATA VAIGTRGT+GSL+KKEIDYFAKIELERC SS SSQRPQ PDMA+S  SSSPPTFW+SVMSWRRKKKR+ +RFV KIC SAFDVSESN++NKISG
Subjt:  MAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKIC-SAFDVSESNRLNKISG

Query:  FSYTILQNDFHSLHM
        F+YTILQN+FHSLHM
Subjt:  FSYTILQNDFHSLHM

KAG7019678.1 hypothetical protein SDJN02_18641, partial [Cucurbita argyrosperma subsp. argyrosperma]9.9e-5183.21Show/hide
Query:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKIC-
        MQ NKPSTTFCKSH KMAATA VAIGTRGT+GSL+KKEIDYFAKIELERC SS SSQRPQ PDMA+S  SS PPTFW+SVMSWRRKKKR+ +RFV KIC 
Subjt:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKIC-

Query:  SAFDVSESNRLNKISGFSYTILQNDFHSLHM
        SAFDVSESN++NKISGF+YTILQN+FHSLHM
Subjt:  SAFDVSESNRLNKISGFSYTILQNDFHSLHM

KGN64543.2 hypothetical protein Csa_013063 [Cucumis sativus]1.3e-3979.82Show/hide
Query:  MAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSAFDVSESNRLNKISGF
        MAA APVAIGTRGT+GSLVKKEIDYFAKIELE   +S SSQR QGP+MASS   SSPPTFW S+MSWRRK K TSNRFV+K+CS FD S SNR+NKISG 
Subjt:  MAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSAFDVSESNRLNKISGF

Query:  SYTILQNDFHSLHM
        SYTILQNDFHSLHM
Subjt:  SYTILQNDFHSLHM

XP_016898893.1 PREDICTED: uncharacterized protein LOC103485409 [Cucumis melo]1.6e-4078.95Show/hide
Query:  MAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSAFDVSESNRLNKISGF
        MAATAPVAIGTRGT+GSL+KKEIDYFAKIELE   +S SSQR QGP+MASS   SSPPTFW S+MSWRRKKK TSNRF++K+CS FD S SNR+NKISG 
Subjt:  MAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSAFDVSESNRLNKISGF

Query:  SYTILQNDFHSLHM
        SYTILQNDFHSLH+
Subjt:  SYTILQNDFHSLHM

XP_022140128.1 uncharacterized protein LOC111010862 [Momordica charantia]7.4e-4678.63Show/hide
Query:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASSS-RSSSPPTFWYSVMSWRRKKKRTSNRFVSKIC
        MQ +KPSTTFCK   +MAATAPVAIGTRGTVGSLVKKEIDYFAKIE ERC+         G DMASSS RSSSPPTFW++VMSWRRKKKR  NRF++KIC
Subjt:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASSS-RSSSPPTFWYSVMSWRRKKKRTSNRFVSKIC

Query:  SAFDVSESNRLNKISGFSYTILQNDFHSLHM
        SAFDVS SNRLNKISGF+YTILQNDF+SLHM
Subjt:  SAFDVSESNRLNKISGFSYTILQNDFHSLHM

TrEMBL top hitse value%identityAlignment
A0A0A0LX43 Uncharacterized protein8.0e-4677.69Show/hide
Query:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICS
        MQ NKP+ TF KSH  MAA APVAIGTRGT+GSLVKKEIDYFAKIELE   +S SSQR QGP+MASS   SSPPTFW S+MSWRRK K TSNRFV+K+CS
Subjt:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICS

Query:  AFDVSESNRLNKISGFSYTILQNDFHSLHM
         FD S SNR+NKISG SYTILQNDFHSLHM
Subjt:  AFDVSESNRLNKISGFSYTILQNDFHSLHM

A0A1S4DSE9 uncharacterized protein LOC1034854097.7e-4178.95Show/hide
Query:  MAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSAFDVSESNRLNKISGF
        MAATAPVAIGTRGT+GSL+KKEIDYFAKIELE   +S SSQR QGP+MASS   SSPPTFW S+MSWRRKKK TSNRF++K+CS FD S SNR+NKISG 
Subjt:  MAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSAFDVSESNRLNKISGF

Query:  SYTILQNDFHSLHM
        SYTILQNDFHSLH+
Subjt:  SYTILQNDFHSLHM

A0A314Z3X1 Uncharacterized protein1.2e-2857.89Show/hide
Query:  MQRNKPSTTFCK--SHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGP--DMASSS-RSSSPPTFWYSVMSWRRKKKRTSNRFV
        MQ    STT  K      MAA AP+AIGTRGTVGSLV+KEI+YF+K+EL+R   SSSS++PQG   DM SSS   SS P+FW+ +M+W+RKK+R+S RF+
Subjt:  MQRNKPSTTFCK--SHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGP--DMASSS-RSSSPPTFWYSVMSWRRKKKRTSNRFV

Query:  SKICSAFDVSESNRLNKISGFSYTILQNDFHSL
        S ICSA  V+E+NRLN I GF+Y IL++D ++L
Subjt:  SKICSAFDVSESNRLNKISGFSYTILQNDFHSL

A0A5A7UTL1 Uncharacterized protein1.2e-3875.65Show/hide
Query:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICS
        MQ NKP+ TF KSH  MAATAPVAIGTRGT+GSL+KKEIDYFAKIELE   +S SSQR QGP+MASS   SSPPTFW S+MSWRRKKK TSNRF++K+CS
Subjt:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICS

Query:  AFDVSESNRLNKISG
         FD S SNR+NKISG
Subjt:  AFDVSESNRLNKISG

A0A6J1CHB1 uncharacterized protein LOC1110108623.6e-4678.63Show/hide
Query:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASSS-RSSSPPTFWYSVMSWRRKKKRTSNRFVSKIC
        MQ +KPSTTFCK   +MAATAPVAIGTRGTVGSLVKKEIDYFAKIE ERC+         G DMASSS RSSSPPTFW++VMSWRRKKKR  NRF++KIC
Subjt:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASSS-RSSSPPTFWYSVMSWRRKKKRTSNRFVSKIC

Query:  SAFDVSESNRLNKISGFSYTILQNDFHSLHM
        SAFDVS SNRLNKISGF+YTILQNDF+SLHM
Subjt:  SAFDVSESNRLNKISGFSYTILQNDFHSLHM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21780.1 unknown protein3.0e-1341.44Show/hide
Query:  APVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASS----SRSSSPPTFWYSVMSWRRKKKRT---SNRFVSKICSAFDVSESNRLNKI
        AP+AIGTRGT+GSLV+KEIDYF       C      +R    +  ++     RSSS    W+S   WR+KK++T     +F   +CSA +VS  NR   +
Subjt:  APVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASS----SRSSSPPTFWYSVMSWRRKKKRT---SNRFVSKICSAFDVSESNRLNKI

Query:  SGFSYTILQND
         GF+Y IL++D
Subjt:  SGFSYTILQND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACGTAATAAACCCAGCACCACATTCTGCAAATCCCATGTCAAAATGGCTGCAACTGCTCCTGTTGCCATTGGAACTCGAGGCACCGTGGGATCGCTCGTC
AAGAAGGAAATTGATTATTTTGCCAAGATTGAGCTTGAAAGATGCACCAGCAGCAGCAGCTCACAGAGGCCTCAAGGACCTGATATGGCTTCTTCTAGCCGCAGC
AGTTCCCCTCCCACTTTCTGGTACTCTGTAATGTCGTGGCGAAGGAAGAAGAAGCGAACCAGCAACCGTTTTGTCTCGAAAATTTGCTCGGCTTTCGATGTTTCG
GAAAGCAATCGGCTGAATAAGATTTCTGGGTTCAGTTATACCATCCTTCAGAATGATTTCCACAGCCTGCACATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAACGTAATAAACCCAGCACCACATTCTGCAAATCCCATGTCAAAATGGCTGCAACTGCTCCTGTTGCCATTGGAACTCGAGGCACCGTGGGATCGCTCGTC
AAGAAGGAAATTGATTATTTTGCCAAGATTGAGCTTGAAAGATGCACCAGCAGCAGCAGCTCACAGAGGCCTCAAGGACCTGATATGGCTTCTTCTAGCCGCAGC
AGTTCCCCTCCCACTTTCTGGTACTCTGTAATGTCGTGGCGAAGGAAGAAGAAGCGAACCAGCAACCGTTTTGTCTCGAAAATTTGCTCGGCTTTCGATGTTTCG
GAAAGCAATCGGCTGAATAAGATTTCTGGGTTCAGTTATACCATCCTTCAGAATGATTTCCACAGCCTGCACATGTAG
Protein sequenceShow/hide protein sequence
MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCTSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSAFDVS
ESNRLNKISGFSYTILQNDFHSLHM