; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g006180 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g006180
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUbiquitin family protein
Genome locationChr06:5814351..5816627
RNA-Seq ExpressionLcy06g006180
SyntenyLcy06g006180
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR019956 - Ubiquitin domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9680291.1 hypothetical protein SADUNF_Sadunf06G0106000 [Salix dunnii]2.7e-1267.21Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIP
        +EVESSDTIDN+ AKI+  EGIP  QQRLIF G+QLE+GRT A YNI  +ST+HL K  IP
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIP

KAG1371403.1 Ubiquitin-40S ribosomal protein S27a [Cocos nucifera]1.6e-1246.49Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP---------IETSILILV
        +EVESSDTIDN+ AKI+  EGIPL QQRLIF G+QLE+GRT A YNI  +ST+HL    + +LR      A +R  +T TKP         ++ ++L   
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP---------IETSILILV

Query:  TNDDSSTTSNFRLE
          DDS   +  R E
Subjt:  TNDDSSTTSNFRLE

KAG2403943.1 Polyubiquitin Ubiquitin Precursor [Vigna angularis]2.1e-1254.12Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKPIET
        +EVESSDTIDN+ AKI+  EGIP  QQRLIF G+QLE+GRT A YNI  +ST+HL       LR        ++ T T+ KP+ET
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKPIET

RVW67137.1 Polyubiquitin-A [Vitis vinifera]2.7e-1267.21Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIP
        +EVESSDTIDN+ AKI+  EGIP  QQRLIF G+QLE+GRT A YNI  +ST+HL K  IP
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIP

WP_213066039.1 hypothetical protein, partial [Acinetobacter baumannii]2.1e-1265.57Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIP
        +EVESSDTIDN+ AKI+  EGIP  QQRLIF G+QLE+GRT A YNI  +ST+HL  R +P
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIP

TrEMBL top hitse value%identityAlignment
A0A2N9IQ87 Ubiquitin7.8e-1348.25Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP---------IETSILILV
        +EVESSDTIDN+ AKI+  EGIP  QQRLIF G+QLE+GRT A YNI  +ST+HL    + +LR      A +R  +T TKP         ++ SIL   
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP---------IETSILILV

Query:  TNDDSSTTSNFRLE
          DDS   S  R E
Subjt:  TNDDSSTTSNFRLE

A0A438G4K9 Polyubiquitin-A1.3e-1267.21Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIP
        +EVESSDTIDN+ AKI+  EGIP  QQRLIF G+QLE+GRT A YNI  +ST+HL K  IP
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIP

A0A446YT58 Uncharacterized protein1.3e-1262.69Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSS
        +EVESSDTIDN+ AKI+  EGIP  QQRLIF G+QLE+GRT A YNI  +ST+HL  R +   R SS
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSS

A0A6A6LK40 Uncharacterized protein1.3e-1267.21Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIP
        +EVESSDTIDN+ AKI+  EGIP  QQRLIF G+QLE+GRT A YNI  +ST+HL K  IP
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIP

B7FH93 Ubiquitin1.3e-1246.49Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP---------IETSILILV
        +EVESSDTIDN+ AKI+  EGIP  QQRLIF G+QLE+GRT A YNI  +ST+HL    + +LR      A +R  +T TKP         ++ ++L   
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP---------IETSILILV

Query:  TNDDSSTTSNFRLE
          DDS T    R E
Subjt:  TNDDSSTTSNFRLE

SwissProt top hitse value%identityAlignment
P51431 Ubiquitin-40S ribosomal protein S27a-21.8e-1456.1Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP
        +EVESSDTIDN+ AKI+  EGIP  QQRLIF G+QLE+GRT A YNI  +ST+HL    + +LR      A +R  +T TKP
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP

P59232 Ubiquitin-40S ribosomal protein S27a-21.8e-1456.1Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP
        +EVESSDTIDN+ AKI+  EGIP  QQRLIF G+QLE+GRT A YNI  +ST+HL    + +LR      A +R  +T TKP
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP

P59233 Ubiquitin-40S ribosomal protein S27a-31.8e-1456.1Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP
        +EVESSDTIDN+ AKI+  EGIP  QQRLIF G+QLE+GRT A YNI  +ST+HL    + +LR      A +R  +T TKP
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP

P59271 Ubiquitin-40S ribosomal protein S27a-11.8e-1456.1Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP
        +EVESSDTIDN+ AKI+  EGIP  QQRLIF G+QLE+GRT A YNI  +ST+HL    + +LR      A +R  +T TKP
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP

Q9ARZ9 Ubiquitin-40S ribosomal protein S27a-11.8e-1456.1Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP
        +EVESSDTIDN+ AKI+  EGIP  QQRLIF G+QLE+GRT A YNI  +ST+HL    + +LR      A +R  +T TKP
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP

Arabidopsis top hitse value%identityAlignment
AT1G23410.1 Ribosomal protein S27a / Ubiquitin family protein1.3e-1556.1Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP
        +EVESSDTIDN+ AKI+  EGIP  QQRLIF G+QLE+GRT A YNI  +ST+HL    + +LR      A +R  +T TKP
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP

AT1G55060.1 ubiquitin 121.7e-1570.91Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHL
        +EVESSDTIDNL AKI+  EGIP  QQRLIF G+QLE+GRT A YNI  +ST+HL
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHL

AT2G47110.1 ubiquitin 61.3e-1556.1Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP
        +EVESSDTIDN+ AKI+  EGIP  QQRLIF G+QLE+GRT A YNI  +ST+HL    + +LR      A +R  +T TKP
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP

AT2G47110.2 ubiquitin 61.3e-1556.1Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP
        +EVESSDTIDN+ AKI+  EGIP  QQRLIF G+QLE+GRT A YNI  +ST+HL    + +LR      A +R  +T TKP
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP

AT3G62250.1 ubiquitin 51.3e-1556.1Show/hide
Query:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP
        +EVESSDTIDN+ AKI+  EGIP  QQRLIF G+QLE+GRT A YNI  +ST+HL    + +LR      A +R  +T TKP
Subjt:  MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTAGAGTCTTCCGACACCATTGACAACTTAATGGCGAAGATCGAGGCAACGGAAGGAATCCCTCTGAGGCAACAACGATTGATCTTCGTCGGAAGGCAA
CTTGAGGAAGGTCGAACCTTTGCCTACTACAACATCTCCGATCAATCAACTATTCACCTTTGGAAGCGACGTATCCCTCAACTTCGTTGTTCTAGCCCAGATCTT
GCCGCACAAAGACCCACTGAAACCAGCACAAAACCCATTGAAACCAGCATTCTGATCTTGGTCACGAACGACGATTCCAGCACGACTTCAAATTTTCGTCTGGAA
CTGCTACTGCTTCAAATCTCGGGTTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTAGAGTCTTCCGACACCATTGACAACTTAATGGCGAAGATCGAGGCAACGGAAGGAATCCCTCTGAGGCAACAACGATTGATCTTCGTCGGAAGGCAA
CTTGAGGAAGGTCGAACCTTTGCCTACTACAACATCTCCGATCAATCAACTATTCACCTTTGGAAGCGACGTATCCCTCAACTTCGTTGTTCTAGCCCAGATCTT
GCCGCACAAAGACCCACTGAAACCAGCACAAAACCCATTGAAACCAGCATTCTGATCTTGGTCACGAACGACGATTCCAGCACGACTTCAAATTTTCGTCTGGAA
CTGCTACTGCTTCAAATCTCGGGTTCGTGA
Protein sequenceShow/hide protein sequence
MEVESSDTIDNLMAKIEATEGIPLRQQRLIFVGRQLEEGRTFAYYNISDQSTIHLWKRRIPQLRCSSPDLAAQRPTETSTKPIETSILILVTNDDSSTTSNFRLE
LLLLQISGS