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Lcy06g006790 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g006790
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationChr06:6560311..6560836
RNA-Seq ExpressionLcy06g006790
SyntenyLcy06g006790
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site
IPR044205 - Calcium-binding protein KIC/PBP1/KRP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056934.1 calcium-binding protein PBP1 [Cucumis melo var. makuwa]3.3e-3470.18Show/hide
Query:  SRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLG--LEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLST
        S NGVV F D FP M++KLG+KGF++ELR GF LLMDKEKGVIT ESL K M F G  LEDEE M MVREGDLDGDG LSEAEFFILM +LSPG M LS+
Subjt:  SRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLG--LEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLST

Query:  DLFHQSRFNKKFRK
          FHQS  ++KF K
Subjt:  DLFHQSRFNKKFRK

KAE8652697.1 hypothetical protein Csa_014317 [Cucumis sativus]7.7e-3166.67Show/hide
Query:  SRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLG--LEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLST
        S   VV F D FP M++KLG KGF++ELR GFRLLMDKEKGVIT ESL K M F G  LEDEE M MV+EGDLDGDG LSEAEFFILM +LSPG M LS+
Subjt:  SRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLG--LEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLST

Query:  DLFHQSRFNKKFRK
          FHQS  ++   K
Subjt:  DLFHQSRFNKKFRK

KAG6573227.1 Calcium-binding protein KIC, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3978.95Show/hide
Query:  MASRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLGLEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLST
        M SRNGVV F D FPAMV+KLG+KGFMEELR GFRLLMDKEKGVIT ESL  KMGFLGL++EE MGMVREGDLDGDG LSEAEF +LMF+LSPGLMQLST
Subjt:  MASRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLGLEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLST

Query:  DLFHQSRFNKKFRK
         LF Q     KFRK
Subjt:  DLFHQSRFNKKFRK

KAG7012400.1 Calcium-binding protein KIC, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-3878.07Show/hide
Query:  MASRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLGLEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLST
        M SRNGVV F D FPAMV+KLG+KGFMEELR GFRLLMDKEKGVIT ESL  KM FLGL++EE MGMVREGDLDGDG LSEAEF +LMF+LSPGLMQLST
Subjt:  MASRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLGLEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLST

Query:  DLFHQSRFNKKFRK
         LF Q     KFRK
Subjt:  DLFHQSRFNKKFRK

XP_038895967.1 calcium-binding protein PBP1-like [Benincasa hispida]9.1e-3271.05Show/hide
Query:  MASRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLG--LEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQL
        M S NGVVFF D FP MV+KLGIKGFM+ELRSGF L+MDKEKG+IT ESL K MGFLG  LEDEE M MVREGDLDGDG L+EAEF ILM RLSP     
Subjt:  MASRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLG--LEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQL

Query:  STDLFHQSRFNKKF
           LFHQS  +K F
Subjt:  STDLFHQSRFNKKF

TrEMBL top hitse value%identityAlignment
A0A067GJU9 EF-hand domain-containing protein6.6e-2866.04Show/hide
Query:  MASRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLGLE---DEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQ
        MAS N  V F D FPAMV+KLG +GFM+EL +GFRLLMD++KG+IT ESL K    LGL+   DEE M M+REGDLDGDG L+E EF  LMFRLSPGLM+
Subjt:  MASRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLGLE---DEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQ

Query:  LSTDLF
         ST+LF
Subjt:  LSTDLF

A0A0A0LV00 EF-hand domain-containing protein8.8e-3368.42Show/hide
Query:  SRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLG--LEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLST
        S   VV F D FP M++KLG KGF++ELR GFRLLMDKEKGVIT ESL K M F G  LEDEE M MV+EGDLDGDG LSEAEFFILM +LSPG M LS+
Subjt:  SRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLG--LEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLST

Query:  DLFHQSRFNKKFRK
          FHQS  ++KF K
Subjt:  DLFHQSRFNKKFRK

A0A5A7UNY8 Calcium-binding protein PBP11.6e-3470.18Show/hide
Query:  SRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLG--LEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLST
        S NGVV F D FP M++KLG+KGF++ELR GF LLMDKEKGVIT ESL K M F G  LEDEE M MVREGDLDGDG LSEAEFFILM +LSPG M LS+
Subjt:  SRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLG--LEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLST

Query:  DLFHQSRFNKKFRK
          FHQS  ++KF K
Subjt:  DLFHQSRFNKKFRK

A0A6J1JUT4 calcium-binding protein KIC-like4.1e-3082.56Show/hide
Query:  MASRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLGLEDEEFMGMVREGDLDGDGVLSEAEFFI
        M SRN VV F D FPAMV+KLG+KGFMEELR GFRLLMDKEKGVIT ESL  KMGFLGLE+EE MGMV EGDLDGDG LSEAEFFI
Subjt:  MASRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLGLEDEEFMGMVREGDLDGDGVLSEAEFFI

A0A7N2LV84 EF-hand domain-containing protein1.1e-2764.22Show/hide
Query:  MASRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLGLE---DEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQ
        M SRNGVV F D FPAMV+KLG +GFM+EL +GFRLLMD+EKGVIT +SL +    LGL+   DEE M M+REGDLDGDG L+E EF  LMFRLSPGLM+
Subjt:  MASRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLGLE---DEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQ

Query:  LSTDLFHQS
         S++L  ++
Subjt:  LSTDLFHQS

SwissProt top hitse value%identityAlignment
O81831 Calcium-binding protein KRP15.0e-1751.06Show/hide
Query:  FTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKK----MGFLGLEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLS
        F D  P M   LG +G + EL +GF LLMD+EKGVIT ESL +     +G   L DE+   M++EGD D DG L++ EF +LMFRLSP LM+ S
Subjt:  FTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKK----MGFLGLEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLS

P43645 Caltractin (Fragment)2.5e-0837.78Show/hide
Query:  NGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLG--LEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLS
        +G + F +    M  K+G +   EE+   FRL  D + G IT ++L +    LG  L DEE   M+ E D DGDG ++E EFF +M + S
Subjt:  NGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLG--LEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLS

Q06827 Caltractin7.3e-0836.67Show/hide
Query:  NGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLG--LEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLS
        +G + F +    M  K+G +   EE+   FRL  D E G I+ ++L +    LG  + DEE   M+ E D DGDG ++E EFF +M + S
Subjt:  NGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLG--LEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLS

Q9LSQ6 Calcium-binding protein PBP12.7e-1853.19Show/hide
Query:  FTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESL----SKKMGFLGLEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLS
        F D FP M  KLG +G +EE+  GF LLMDK+KGVIT ESL    S  +G   L D++   M+ EGD D DG L++ EF +LMFRLSP LM+ S
Subjt:  FTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESL----SKKMGFLGLEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLS

Q9ZPX9 Calcium-binding protein KIC7.7e-1849.45Show/hide
Query:  FTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLGLE---DEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQ
        + D  P M +K+ ++ F+ EL  GF LL D E+ +IT ESL +  G LG+E    E+  GMVREGDLDGDG L++ EF +LM RLSP +M+
Subjt:  FTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLGLE---DEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQ

Arabidopsis top hitse value%identityAlignment
AT1G66410.1 calmodulin 43.7e-0735.96Show/hide
Query:  ASRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLG--LEDEEFMGMVREGDLDGDGVLSEAEFFILM
        A  NG + F +    M +K+      EEL+  FR+    + G I+   L   M  LG  L DEE   M+RE D+DGDG ++  EF  +M
Subjt:  ASRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLG--LEDEEFMGMVREGDLDGDGVLSEAEFFILM

AT2G46600.1 Calcium-binding EF-hand family protein5.5e-1949.45Show/hide
Query:  FTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLGLE---DEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQ
        + D  P M +K+ ++ F+ EL  GF LL D E+ +IT ESL +  G LG+E    E+  GMVREGDLDGDG L++ EF +LM RLSP +M+
Subjt:  FTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLGLE---DEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQ

AT4G14640.1 calmodulin 81.7e-0735.96Show/hide
Query:  NGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLG--LEDEEFMGMVREGDLDGDGVLSEAEFFILMFRL
        NG + F +    M +KL      EEL+  F++    + G I+   LS  M  LG  L DEE   M++E DLDGDG ++  EF  +M  +
Subjt:  NGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLG--LEDEEFMGMVREGDLDGDGVLSEAEFFILMFRL

AT4G27280.1 Calcium-binding EF-hand family protein3.6e-1851.06Show/hide
Query:  FTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKK----MGFLGLEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLS
        F D  P M   LG +G + EL +GF LLMD+EKGVIT ESL +     +G   L DE+   M++EGD D DG L++ EF +LMFRLSP LM+ S
Subjt:  FTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKK----MGFLGLEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLS

AT5G54490.1 pinoid-binding protein 11.9e-1953.19Show/hide
Query:  FTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESL----SKKMGFLGLEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLS
        F D FP M  KLG +G +EE+  GF LLMDK+KGVIT ESL    S  +G   L D++   M+ EGD D DG L++ EF +LMFRLSP LM+ S
Subjt:  FTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESL----SKKMGFLGLEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCACGAAACGGGGTCGTTTTCTTCACAGATCGCTTCCCTGCAATGGTGCAGAAATTGGGTATTAAAGGGTTTATGGAAGAACTCAGATCTGGGTTTCGTTTGCT
GATGGATAAAGAAAAGGGTGTCATAACAGTCGAAAGCTTGAGCAAAAAGATGGGATTTTTGGGTTTGGAGGATGAAGAATTCATGGGGATGGTGAGAGAAGGGGATTTGG
ATGGAGATGGAGTTTTGAGTGAAGCTGAATTTTTCATTCTCATGTTCAGACTTAGCCCTGGATTGATGCAATTATCCACTGATTTATTTCACCAATCTCGTTTCAATAAA
AAGTTTAGGAAATAG
mRNA sequenceShow/hide mRNA sequence
CAAAATTTTCCCCCATTTCCACTCCCTCCTTCCTCAATAAATACCCTCTTCAAACAAATTCTCTCATCATCAAATTCAATCTCAAAGTCCACGATGGCATCACGAAACGG
GGTCGTTTTCTTCACAGATCGCTTCCCTGCAATGGTGCAGAAATTGGGTATTAAAGGGTTTATGGAAGAACTCAGATCTGGGTTTCGTTTGCTGATGGATAAAGAAAAGG
GTGTCATAACAGTCGAAAGCTTGAGCAAAAAGATGGGATTTTTGGGTTTGGAGGATGAAGAATTCATGGGGATGGTGAGAGAAGGGGATTTGGATGGAGATGGAGTTTTG
AGTGAAGCTGAATTTTTCATTCTCATGTTCAGACTTAGCCCTGGATTGATGCAATTATCCACTGATTTATTTCACCAATCTCGTTTCAATAAAAAGTTTAGGAAATAGAT
ATGTATATGCATATGTTTACTCTTTTGTTTTGTTTTTGTTTTTTTCTCTCCTTTGTTACATTTGTTAGCTAAATAATGTAAAGTTT
Protein sequenceShow/hide protein sequence
MASRNGVVFFTDRFPAMVQKLGIKGFMEELRSGFRLLMDKEKGVITVESLSKKMGFLGLEDEEFMGMVREGDLDGDGVLSEAEFFILMFRLSPGLMQLSTDLFHQSRFNK
KFRK