; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g007130 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g007130
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr06:6941533..6942420
RNA-Seq ExpressionLcy06g007130
SyntenyLcy06g007130
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]1.6e-7544.56Show/hide
Query:  MEKELNKLLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSE
        +E +++ +L +EE+ WK RSR DWL+ GD+NT++FHSKAS ++RKN++ G+ED+ GNWV+D E I      +F  LF+SS+P+   +++ ++ +  K+S+
Subjt:  MEKELNKLLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSE

Query:  DQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIA
        +    L+  FT E+I  AL    PTKAPGPDG  A F+Q++W ++ + +T+ CL++LN+   +D  N+T I LIPK    RK+ ++RPISLCNV Y+++A
Subjt:  DQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIA

Query:  KVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISS
        K +ANRLK +L+ + +PN+SAF+P  +ITD+VI+G++C+H +      + G +A+K+D+SKA+DRVEW+++++ M+ +GFS KW + IM+CI++
Subjt:  KVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISS

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]1.0e-8250.85Show/hide
Query:  MEKELNKLLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSE
        + +E+N LLD+EE  W  R++  WL+ GDRNT++FH++AS ++++N + G+ DE G W ++EE I  AA SYF+N++SSSHP+   + +V EA+  K++E
Subjt:  MEKELNKLLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSE

Query:  DQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIA
        +    L REFT+EE+ VALK   P KAPGPDG  A+F+Q+YW+++  +VT++ LNVLN N  + E N T+I+LIPK  + ++MTD+RPISLCNV YKLI+
Subjt:  DQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIA

Query:  KVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISSV
        K+LANRLK +L  + + N+SAF    +ITD+V++ F+ +H L+ K+ GKEG +A+K+DMSKAFDRVEW +I K+M +MGF  +WR+ +M CI+SV
Subjt:  KVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISSV

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]1.9e-8151.53Show/hide
Query:  MEKELNKLLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSE
        + KE+N+LLD EE+ W+ RSR  WL  GDRNT++FH+KAS ++R+N + G+ DENGNW +  E I   A SYF  ++SSS P    +++V++A+   ++E
Subjt:  MEKELNKLLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSE

Query:  DQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIA
        +    L +EFTREEIE AL    PTKAPGPDG  A+F+Q+YWN++  D+  + L+VLN N  + E N T+ITL+PK  +  KM+D+RPISLCNV YKLI+
Subjt:  DQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIA

Query:  KVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISSV
        KVLANRLK++L  + + N+SAF+ G +ITD+V++ F+ +H L  K  GKEG  A+K+DMSKA+DRVEW +I ++M KMGF  KW   +M+CI+SV
Subjt:  KVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISSV

XP_023901742.1 uncharacterized protein LOC112013579 [Quercus suber]5.7e-7848.47Show/hide
Query:  MEKELNKLLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSE
        + KELN LLD EE+ W+ RS+  W R GDRNT++FH++AS +++KN +  L +E+G W + +E I A A SYF N+++SS P    +N+V+ A+ +++++
Subjt:  MEKELNKLLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSE

Query:  DQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIA
        +    L + FT EE+  ALK   PTKAPGPDG  A F+  YW+++   +T + LNVLN N  + E N T+I+LIPK     +MT++RPISLCN +YK+I+
Subjt:  DQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIA

Query:  KVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISSV
        KVLANR K++L  + + N+SAF P  +ITD+V++ F+ +H LN K+ GKE ++++K+DMSKAFDRVEWS+I  +M K+GF  KW + IMNC+SSV
Subjt:  KVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISSV

XP_023912601.1 uncharacterized protein LOC112024185 [Quercus suber]1.2e-7547.92Show/hide
Query:  LLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSEDQVRWLD
        ++D EE+ W+ RS+  W R GDRNT++FH++AS +++KN + GL +E+G W + +E I A A SYF N+++SS P    +N+V+ A+ ++++++    L 
Subjt:  LLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSEDQVRWLD

Query:  REFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIAKVLANRL
        + FT EE+  ALK   PTKAP PDG  A+F+  YW+++   +T + LNVLN N  + E N T+I+LIPK     +MT++RPISLCN +YK+I+KVLANR 
Subjt:  REFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIAKVLANRL

Query:  KSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISSV
        K++L  + + N+SAF P  +ITD+V++ FK +H LN K+ GKE ++++K+DMSKAFDRVEWS+I  +M K+GF  KW + IMNC+SSV
Subjt:  KSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISSV

TrEMBL top hitse value%identityAlignment
A0A2N9ELU5 Uncharacterized protein1.1e-7447.12Show/hide
Query:  MEKELNKLLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSE
        + +ELN+ +D EE+ W+ RSR  WL  GDRNTR+FH+KA+ +++++EM  +EDE G  VE  +++G  A +YF  +++ SHP+   ++ V   + +K++ 
Subjt:  MEKELNKLLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSE

Query:  DQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIA
             L REFT EE+   +K   PTKAPGPDG  ALFYQ+YW++    VT+  LN+LN N      N T I L+PK  + ++M++YRPISLCNVSYK+++
Subjt:  DQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIA

Query:  KVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISSV
        KVLANR K VL  + + N+SAFVPG +ITD+V++ F+ IH LN+K  G+E ++A+K+DMSKA+DRVEW +++ +M  MGF  KW  +IM C+ +V
Subjt:  KVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISSV

A0A2N9EV70 Uncharacterized protein1.9e-7447.8Show/hide
Query:  MEKELNKLLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSE
        + +ELN LL +EE  W+ RSR  WL  GDRNT++FH +AS + R+N +  L DE G W+E  EEI      Y+++LF++SHP   ++ + V  V K ++ 
Subjt:  MEKELNKLLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSE

Query:  DQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIA
        +    L  EF  EE+E A+K   P+KAPGPDG   +FYQ+YW+V+  DVT   L+ LN  + +   N+T ITLIPK     K+TD+RPISLCNV YKL+A
Subjt:  DQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIA

Query:  KVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISSV
        KVL NRLK +L  + + ++SAFVPG +ITD+V++ F+ +H ++   +G+EG +A+K+DMSKA+DRVEW Y++++M KMGF +KW   ++ CISSV
Subjt:  KVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISSV

A0A2N9HPU0 Uncharacterized protein1.4e-7447.8Show/hide
Query:  MEKELNKLLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSE
        ++ E+N LL++EE  W+ RSR  WLR GDRNTR+FH +AS  +R+N + GL+D+ G W E++ E+      +F ++F +S P  E++ + V  V   +S+
Subjt:  MEKELNKLLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSE

Query:  DQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIA
        +    L  EFT  E+E+ALK   P KAPGPDG   LF+Q YW V+  +VT+  L+ LN    ++  N+T ITLIPK  +  ++T++RPISLCNV+YKLI+
Subjt:  DQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIA

Query:  KVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISSV
        KV+ANRLK +L  + +  +SAFVPG +ITD+V++ F+ +H ++S  +GK+G +AMK+DMSKA+DRVEWS+++K+M KMGF  +W + IMNCIS+V
Subjt:  KVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISSV

A0A2N9HRK6 Uncharacterized protein1.2e-7648.14Show/hide
Query:  MEKELNKLLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSE
        + +ELN LL +EE  W+ RSR  WL  GDRNT++FH +AS ++R+N +  L DE G W+E  E+I      Y+++LF++SHP   ++ + V  V K +++
Subjt:  MEKELNKLLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSE

Query:  DQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIA
        D    L REF  EE+E A+K   P+KAPGPDG   +FYQ+YW+V+  DVT   L+ LN  + +   N+T ITLIPK     K+ D+RPISLCNV YKL+A
Subjt:  DQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIA

Query:  KVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISSV
        KVLANRLK +L  + + ++SAFVPG +ITD+V++ F+ +H ++   +G+EG +A+K+DMSKA+DRVEW Y++++M KMGF +KW   ++ CISSV
Subjt:  KVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISSV

A0A7N2L6Z9 Reverse transcriptase domain-containing protein4.4e-7648.81Show/hide
Query:  MEKELNKLLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSE
        + +ELN LLD+EE+ W  RS+  WL+ GDRNT++FH++AS ++++N + G+ D+ G W ED + I  AA +YF +++S+S+P+M D  +V  A+   ++E
Subjt:  MEKELNKLLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSE

Query:  DQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIA
        +    L R FTREEI  ALK   PTK+PGPDG  A+F+Q+YW+++  +V+ + LNVLN    +D  N T+I LIPK  + ++MTD+RPISLCNV YKLI+
Subjt:  DQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIA

Query:  KVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISSV
        K LANRLK+ L L+   N+SAF    +ITD+V++ ++ +H L  K  GK+  +A K+DMSKAFDRVEW +I+++M KMGF+  W + IM CISSV
Subjt:  KVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISSV

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein9.0e-2627.71Show/hide
Query:  QKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVD-KKLSEDQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQR
        ++ KN++  ++++ G+   D  EI      Y+ +L+++   N+E+++  ++     +L++++V  L+R  T  EI   + S P  K+PGPDG  A FYQR
Subjt:  QKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVD-KKLSEDQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQR

Query:  YWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCG-DLRKMTDYRPISLCNVSYKLIAKVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCI
        Y   +   + ++  ++  +    + F   SI LIPK G D  K  ++RPISL N+  K++ K+LANR++  +  +   ++  F+PG     ++      I
Subjt:  YWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCG-DLRKMTDYRPISLCNVSYKLIAKVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCI

Query:  HALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFI
          +N      + H+ + ID  KAFD+++  ++ K + K+G    +   I
Subjt:  HALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFI

P08548 LINE-1 reverse transcriptase homolog1.4e-2326.89Show/hide
Query:  DRNTRWFHSK-------ASHQKRKNEMKGL----EDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVD-KKLSEDQVRWLDREFTREEIE
        +++  WF  K        ++  RK  +K L     + N     D  EI    N Y+  L+S  + N++++++ +EA    +LS+ +V  L+R  +  EI 
Subjt:  DRNTRWFHSK-------ASHQKRKNEMKGL----EDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVD-KKLSEDQVRWLDREFTREEIE

Query:  VALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCG-DLRKMTDYRPISLCNVSYKLIAKVLANRLKSVLSLVT
          +++ P  K+PGPDG  + FYQ +   +   +  +  N+  +    + F   +ITLIPK G D  +  +YRPISL N+  K++ K+L NR++  +  + 
Subjt:  VALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCG-DLRKMTDYRPISLCNVSYKLIAKVLANRLKSVLSLVT

Query:  APNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMG
          ++  F+PG     ++      I  +N   +  + H+ + ID  KAFD ++  ++ + + K+G
Subjt:  APNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMG

P11369 LINE-1 retrotransposable element ORF2 protein6.2e-2729.17Show/hide
Query:  LEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVD-KKLSEDQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDV
        + +E G+   D EEI     S++  L+S+   N+++++K ++     KL++DQV  L+   + +EIE  + S P  K+PGPDG  A FYQ +   +   +
Subjt:  LEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVD-KKLSEDQVRWLDREFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDV

Query:  TEVCLNVLNQNAKVDEFNNTSITLIPK-CGDLRKMTDYRPISLCNVSYKLIAKVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMG
         ++   +  +    + F   +ITLIPK   D  K+ ++RPISL N+  K++ K+LANR++  +  +  P++  F+PG     ++      IH +N   + 
Subjt:  TEVCLNVLNQNAKVDEFNNTSITLIPK-CGDLRKMTDYRPISLCNVSYKLIAKVLANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMG

Query:  KEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFI
         + H+ + +D  KAFD+++  ++ K++ + G    + N I
Subjt:  KEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFI

P14381 Transposon TX1 uncharacterized 149 kDa protein6.2e-2729.24Show/hide
Query:  IRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSEDQVRWLDREFTREEIEV
        +RSR   L   DR +R+F++    +  + ++  L  E+G  +ED E I   A S++ NLFS    + +   ++ + +   +SE +   L+   T +E+  
Subjt:  IRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSEDQVRWLDREFTREEIEV

Query:  ALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIAKVLANRLKSVLSLVTAP
        AL+  P  K+PG DG    F+Q +W+ +  D   V      +           ++L+PK GDLR + ++RP+SL +  YK++AK ++ RLKSVL+ V  P
Subjt:  ALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIAKVLANRLKSVLSLVTAP

Query:  NKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISS
        ++S  VPG  I D+V L    +H      +       + +D  KAFDRV+  Y+   +    F  ++  ++    +S
Subjt:  NKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISS

Q03274 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment)6.9e-1026.34Show/hide
Query:  REFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIAKVLANRL
        R   REEI+ A+K   P+ APG DG       R    + ++  +  L++L  +     +     TLIPK GDL   +++RPI++ +   +L+ ++LA RL
Subjt:  REFTREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIAKVLANRL

Query:  KSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCIS
        ++ + L  A    A + G ++   ++  +     ++S+   ++ +  + +D+ KAFD V  S I + + ++G      N+I   +S
Subjt:  KSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCIS

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein1.1e-1528.04Show/hide
Query:  EMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNM--EDLNKVVEAVDKKLSEDQVRWLDREF
        E  ++ +SR  WL+ GD NTR+FH      + KN +K L  ++   VE+  ++     +Y+++L  S    +  + + ++ +    + ++     L    
Subjt:  EMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNM--EDLNKVVEAVDKKLSEDQVRWLDREF

Query:  TREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLI
        + +EI  A+ + P  KAPGPD   A F+   W V+                 +  FN T+ITLIPK   + +++ +RP+S C V YK+I
Subjt:  TREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLI

AT4G20520.1 RNA binding;RNA-directed DNA polymerases1.4e-1030.49Show/hide
Query:  LANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKW
        +  RLK +++ +  P +++F+PG V TD+++   + +H++  K  G +G + +K+D+ KA+DR+ W Y++  +   GF   W
Subjt:  LANRLKSVLSLVTAPNKSAFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGGAGCTAAACAAGCTGTTAGATGAGGAGGAAATGTGCTGGAAAATTAGATCCCGTGAGGATTGGCTTAGATGGGGCGACAGAAACACCAGATGGTTCCACTC
TAAAGCCTCCCACCAAAAAAGGAAAAATGAGATGAAGGGTCTGGAAGATGAGAATGGCAATTGGGTGGAAGATGAAGAGGAGATAGGGGCTGCGGCCAATTCCTATTTCT
CGAATTTATTTTCCTCATCTCACCCTAATATGGAAGATCTCAACAAAGTAGTCGAGGCAGTCGACAAAAAGCTATCGGAAGACCAAGTCAGATGGCTAGACAGAGAATTT
ACAAGAGAAGAGATTGAAGTGGCCCTCAAAAGTAAGCCCCCTACAAAAGCTCCGGGTCCTGACGGAGCTCATGCCTTATTCTATCAAAGATACTGGAACGTTATTAGCAA
GGATGTGACAGAGGTTTGCTTGAATGTTCTGAACCAGAATGCTAAAGTGGATGAGTTTAACAACACCTCAATAACCTTAATCCCTAAATGCGGCGATCTAAGGAAGATGA
CAGATTATAGACCCATAAGCCTATGCAACGTTTCCTACAAGCTTATAGCAAAAGTGCTCGCAAACCGCCTCAAGAGTGTCCTTAGTTTGGTCACTGCCCCAAACAAATCT
GCATTTGTCCCTGGCTGCGTCATCACAGATCATGTGATCCTAGGCTTTAAGTGTATCCATGCTCTCAACAGCAAAAGTATGGGAAAAGAAGGGCATATTGCAATGAAAAT
TGACATGAGCAAAGCTTTCGATCGCGTTGAATGGTCATATATCGACAAAATGATGGCTAAAATGGGTTTTAGTAGGAAATGGAGGAACTTCATAATGAACTGCATCTCCT
CGGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGGAGCTAAACAAGCTGTTAGATGAGGAGGAAATGTGCTGGAAAATTAGATCCCGTGAGGATTGGCTTAGATGGGGCGACAGAAACACCAGATGGTTCCACTC
TAAAGCCTCCCACCAAAAAAGGAAAAATGAGATGAAGGGTCTGGAAGATGAGAATGGCAATTGGGTGGAAGATGAAGAGGAGATAGGGGCTGCGGCCAATTCCTATTTCT
CGAATTTATTTTCCTCATCTCACCCTAATATGGAAGATCTCAACAAAGTAGTCGAGGCAGTCGACAAAAAGCTATCGGAAGACCAAGTCAGATGGCTAGACAGAGAATTT
ACAAGAGAAGAGATTGAAGTGGCCCTCAAAAGTAAGCCCCCTACAAAAGCTCCGGGTCCTGACGGAGCTCATGCCTTATTCTATCAAAGATACTGGAACGTTATTAGCAA
GGATGTGACAGAGGTTTGCTTGAATGTTCTGAACCAGAATGCTAAAGTGGATGAGTTTAACAACACCTCAATAACCTTAATCCCTAAATGCGGCGATCTAAGGAAGATGA
CAGATTATAGACCCATAAGCCTATGCAACGTTTCCTACAAGCTTATAGCAAAAGTGCTCGCAAACCGCCTCAAGAGTGTCCTTAGTTTGGTCACTGCCCCAAACAAATCT
GCATTTGTCCCTGGCTGCGTCATCACAGATCATGTGATCCTAGGCTTTAAGTGTATCCATGCTCTCAACAGCAAAAGTATGGGAAAAGAAGGGCATATTGCAATGAAAAT
TGACATGAGCAAAGCTTTCGATCGCGTTGAATGGTCATATATCGACAAAATGATGGCTAAAATGGGTTTTAGTAGGAAATGGAGGAACTTCATAATGAACTGCATCTCCT
CGGTCTAA
Protein sequenceShow/hide protein sequence
MEKELNKLLDEEEMCWKIRSREDWLRWGDRNTRWFHSKASHQKRKNEMKGLEDENGNWVEDEEEIGAAANSYFSNLFSSSHPNMEDLNKVVEAVDKKLSEDQVRWLDREF
TREEIEVALKSKPPTKAPGPDGAHALFYQRYWNVISKDVTEVCLNVLNQNAKVDEFNNTSITLIPKCGDLRKMTDYRPISLCNVSYKLIAKVLANRLKSVLSLVTAPNKS
AFVPGCVITDHVILGFKCIHALNSKSMGKEGHIAMKIDMSKAFDRVEWSYIDKMMAKMGFSRKWRNFIMNCISSV