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Lcy06g007290 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g007290
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
Genome locationChr06:7113974..7114510
RNA-Seq ExpressionLcy06g007290
SyntenyLcy06g007290
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7837133.1 uncharacterized protein G2W53_005615 [Senna tora]9.6e-0437.63Show/hide
Query:  LLEAKAILKGIRMIANTYAQNQIPLEVESDSMEVVSALSGSSEDLSEVKVITDAIGKLASKMNVVSFDHCNRSTNSVAHCIANFVCNFGSDAV
        LLEA A LKG+ +  N    N I   +E ++ +VV  + GSS++LS + +I D I K     + V     +R++N+VA  IANF CN  +  V
Subjt:  LLEAKAILKGIRMIANTYAQNQIPLEVESDSMEVVSALSGSSEDLSEVKVITDAIGKLASKMNVVSFDHCNRSTNSVAHCIANFVCNFGSDAV
XP_010682311.1 PREDICTED: uncharacterized protein LOC104897185 [Beta vulgaris subsp. vulgaris]4.3e-0434.41Show/hide
Query:  QIHQKWAIKLLEAKAILKGIRMIANTYAQNQIPLEVESDSMEVVSALSGSSEDLSEVKVITDAIGKLASKMNVVSFDHCNRSTNSVAHCIANF
        Q H  W +++ EA+A+ +G+R+  N   +  I   VESD ++V+SAL   S   S+  +I + I +     NVV +    R+ N VAH +A+F
Subjt:  QIHQKWAIKLLEAKAILKGIRMIANTYAQNQIPLEVESDSMEVVSALSGSSEDLSEVKVITDAIGKLASKMNVVSFDHCNRSTNSVAHCIANF
XP_021753633.1 uncharacterized protein LOC110719026 [Chenopodium quinoa]2.3e-0539.36Show/hide
Query:  QQIHQKWAIKLLEAKAILKGIRMIANTYAQNQIPLEVESDSMEVVSALSGSSEDLSEVKVITDAIGKLASKMNVVSFDHCNRSTNSVAHCIANF
        QQI   W +++ EAKAI  G+R+ A    ++   L VESD ++V+ AL   + DLSE+ +I D I  L S  + V + +  R  N VAH  A+F
Subjt:  QQIHQKWAIKLLEAKAILKGIRMIANTYAQNQIPLEVESDSMEVVSALSGSSEDLSEVKVITDAIGKLASKMNVVSFDHCNRSTNSVAHCIANF
TrEMBL top hitse value%identityAlignment
A0A6J1DNV9 uncharacterized protein LOC1110224037.9e-0438.1Show/hide
Query:  IKLLEAKAILKGIRMIANTYAQNQIPLEVESDSMEVVSALSGSSEDLSEVKVITDAIGKLASKMNVVSFDHCNRSTNSVAHCIA
        +KLLEA AIL+G+R + N       PL +E+DS EV S L+   EDL++   + + I  L     +++F    R TN  AH +A
Subjt:  IKLLEAKAILKGIRMIANTYAQNQIPLEVESDSMEVVSALSGSSEDLSEVKVITDAIGKLASKMNVVSFDHCNRSTNSVAHCIA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCCATATTTGCGACAGTTTGCCAGTCCGAGTCCGAGCTTAGAAACTTCGACGACATGTGTTTCGTTCGGATCCCCGATCTGCTTCGACTGGCAACAAATT
CACCAAAAATGGGCGATTAAATTGCTGGAAGCCAAAGCCATCTTAAAAGGGATTAGGATGATTGCTAATACCTATGCGCAAAACCAAATTCCTTTAGAGGTGGAG
TCGGATTCTATGGAAGTCGTCTCAGCTCTCTCTGGATCGTCAGAAGACCTCTCGGAAGTGAAAGTAATCACTGATGCCATTGGCAAGCTTGCCTCCAAGATGAAT
GTCGTCTCTTTCGACCACTGTAATAGGTCTACGAACTCGGTTGCCCACTGCATCGCAAATTTTGTTTGTAATTTTGGTTCAGATGCTGTTTCATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCCATATTTGCGACAGTTTGCCAGTCCGAGTCCGAGCTTAGAAACTTCGACGACATGTGTTTCGTTCGGATCCCCGATCTGCTTCGACTGGCAACAAATT
CACCAAAAATGGGCGATTAAATTGCTGGAAGCCAAAGCCATCTTAAAAGGGATTAGGATGATTGCTAATACCTATGCGCAAAACCAAATTCCTTTAGAGGTGGAG
TCGGATTCTATGGAAGTCGTCTCAGCTCTCTCTGGATCGTCAGAAGACCTCTCGGAAGTGAAAGTAATCACTGATGCCATTGGCAAGCTTGCCTCCAAGATGAAT
GTCGTCTCTTTCGACCACTGTAATAGGTCTACGAACTCGGTTGCCCACTGCATCGCAAATTTTGTTTGTAATTTTGGTTCAGATGCTGTTTCATCTTAG
Protein sequenceShow/hide protein sequence
MEPYLRQFASPSPSLETSTTCVSFGSPICFDWQQIHQKWAIKLLEAKAILKGIRMIANTYAQNQIPLEVESDSMEVVSALSGSSEDLSEVKVITDAIGKLASKMN
VVSFDHCNRSTNSVAHCIANFVCNFGSDAVSS