; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g007700 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g007700
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRetrotransposon protein, putative, unclassified
Genome locationChr06:7506371..7506896
RNA-Seq ExpressionLcy06g007700
SyntenyLcy06g007700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031740.1 retrotransposon protein, putative, unclassified [Cucumis melo var. makuwa]1.0e-0346.55Show/hide
Query:  NIPTGDKNSRDEIYWRLDKRGFFSVKSAYRLAIDTKASEEASLSDNKKSTSIWKSIWN
        NIP  +  S+D+I+W  D +  F VKS YR+AID K S EAS S+ K      K+IW+
Subjt:  NIPTGDKNSRDEIYWRLDKRGFFSVKSAYRLAIDTKASEEASLSDNKKSTSIWKSIWN
TrEMBL top hitse value%identityAlignment
A0A5A7SLW3 Retrotransposon protein, putative, unclassified4.8e-0446.55Show/hide
Query:  NIPTGDKNSRDEIYWRLDKRGFFSVKSAYRLAIDTKASEEASLSDNKKSTSIWKSIWN
        NIP  +  S+D+I+W  D +  F VKS YR+AID K S EAS S+ K      K+IW+
Subjt:  NIPTGDKNSRDEIYWRLDKRGFFSVKSAYRLAIDTKASEEASLSDNKKSTSIWKSIWN
A0A5E4GGB8 PREDICTED: reverse mRNAase (Fragment)8.2e-0443.1Show/hide
Query:  IPTGDKNSRDEIYWRLDKRGFFSVKSAYRLAID-TKASEEASLSDNKKSTSIWKSIWN
        IP   +   D I W  DK G F+VKSAYR+A+  T   E+ S S N  ++ +W+ IWN
Subjt:  IPTGDKNSRDEIYWRLDKRGFFSVKSAYRLAID-TKASEEASLSDNKKSTSIWKSIWN
A0A6P9ERU0 uncharacterized protein LOC1183498538.2e-0440Show/hide
Query:  NIPTGDKNSRDEIYWRLDKRGFFSVKSAYRLAIDTKASEEASLSDNKKSTSIWKSIWNFQ
        ++P     S D++ W   KRG F+VKSAY L  + K+  +   S  KK+ SIWK+IW+ +
Subjt:  NIPTGDKNSRDEIYWRLDKRGFFSVKSAYRLAIDTKASEEASLSDNKKSTSIWKSIWNFQ
M5XK32 Reverse transcriptase domain-containing protein (Fragment)8.2e-0443.1Show/hide
Query:  IPTGDKNSRDEIYWRLDKRGFFSVKSAYRLAID-TKASEEASLSDNKKSTSIWKSIWN
        IP   +   D I W  DK G F+VKSAYR+A+  T   E+ S S N  ++ +W+ IWN
Subjt:  IPTGDKNSRDEIYWRLDKRGFFSVKSAYRLAID-TKASEEASLSDNKKSTSIWKSIWN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACAACACCTAATCCATCAAGCCTTCAACACCCAAGATGCTATAGACATTCTAACATTCCTACAGGGGACAAAAATTCTAGAGATGAGATCTATTGGAGGCTGGA
CAAAAGAGGATTTTTCTCCGTTAAGAGTGCTTATCGCTTAGCCATCGATACCAAAGCTAGTGAAGAAGCATCGCTCTCGGACAACAAAAAATCAACCTCTATATGGAAGA
GCATATGGAACTTTCAGGAGTGCTTCCCAGGACTAAAGTTTGATAAGGTGGTCTTCAAAGGATTATTGGAGTTGGGATGGTGGTTGAAACAAGGAAGATCAGTTAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGACAACACCTAATCCATCAAGCCTTCAACACCCAAGATGCTATAGACATTCTAACATTCCTACAGGGGACAAAAATTCTAGAGATGAGATCTATTGGAGGCTGGA
CAAAAGAGGATTTTTCTCCGTTAAGAGTGCTTATCGCTTAGCCATCGATACCAAAGCTAGTGAAGAAGCATCGCTCTCGGACAACAAAAAATCAACCTCTATATGGAAGA
GCATATGGAACTTTCAGGAGTGCTTCCCAGGACTAAAGTTTGATAAGGTGGTCTTCAAAGGATTATTGGAGTTGGGATGGTGGTTGAAACAAGGAAGATCAGTTAGCTAA
Protein sequenceShow/hide protein sequence
MKTTPNPSSLQHPRCYRHSNIPTGDKNSRDEIYWRLDKRGFFSVKSAYRLAIDTKASEEASLSDNKKSTSIWKSIWNFQECFPGLKFDKVVFKGLLELGWWLKQGRSVS