; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g008600 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g008600
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description60S ribosomal protein L18a-like protein
Genome locationChr06:8419854..8423836
RNA-Seq ExpressionLcy06g008600
SyntenyLcy06g008600
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044804 - AT1G29970-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147407.1 60S ribosomal protein L18a-like protein [Cucumis sativus]5.9e-7486.79Show/hide
Query:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYY--PSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGW
        M+GDGK+N VF DP SQYHYGTFQGVANYY  P  PQPQPQPQS VGFPQPVA   VSG  PCYHGHLGYQAVPVQGYAI+EGRPFQE RLPCCGIGMGW
Subjt:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYY--PSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGIT G + W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW

XP_008444018.1 PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo]2.7e-7486.79Show/hide
Query:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYY--PSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGW
        M+GDGK++ VF DP SQYHYGTFQGVANYY  P  PQPQPQPQS VGFPQPVAP  VSG  PCYHGHLGYQAVPVQGYAI+EGRPFQE RLPCCGIGMGW
Subjt:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYY--PSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGIT G + W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW

XP_022140257.1 60S ribosomal protein L18a-like protein [Momordica charantia]2.4e-7586.79Show/hide
Query:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYYPSA--PQPQPQPQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGW
        M+GDGKN+ V  DPQSQYHYGTFQGVANYYPSA  PQPQPQP S VGFPQPVAP  VSG HP YHGHLGYQAVPVQGYAIIEGRP+QE RLPCCGIGMGW
Subjt:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYYPSA--PQPQPQPQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA++AITFG+TKGA+SW
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW

XP_022927552.1 60S ribosomal protein L18a-like protein [Cucurbita moschata]2.0e-6981.76Show/hide
Query:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYYPSAPQPQPQ--PQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGW
        M+GDGK++ VF DPQSQYHYGTFQGVANYY SAP+PQPQ  PQS VGFP  VAP      HPCYHGHL YQAVPVQGYAIIEGRPF E RLPCCGIGMGW
Subjt:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYYPSAPQPQPQ--PQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW
        FLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+ACAIASVLAV+AITFG++KG + W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW

XP_038895475.1 60S ribosomal protein L18a-like protein [Benincasa hispida]5.9e-7487.9Show/hide
Query:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYYPSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGWFL
        M+GDGK++ VF DPQSQYHYGTFQGVANYY SA  PQ QPQSFVGFPQPV PS VSG HPCYHGHLGYQAVPVQGYAIIE RPF+E RLPCCGIGMGWFL
Subjt:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYYPSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGWFL

Query:  FMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW
        FMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGIT G + W
Subjt:  FMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW

TrEMBL top hitse value%identityAlignment
A0A0A0M051 Uncharacterized protein2.9e-7486.79Show/hide
Query:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYY--PSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGW
        M+GDGK+N VF DP SQYHYGTFQGVANYY  P  PQPQPQPQS VGFPQPVA   VSG  PCYHGHLGYQAVPVQGYAI+EGRPFQE RLPCCGIGMGW
Subjt:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYY--PSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGIT G + W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW

A0A1S3B9D9 60S ribosomal protein L18a-like protein1.3e-7486.79Show/hide
Query:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYY--PSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGW
        M+GDGK++ VF DP SQYHYGTFQGVANYY  P  PQPQPQPQS VGFPQPVAP  VSG  PCYHGHLGYQAVPVQGYAI+EGRPFQE RLPCCGIGMGW
Subjt:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYY--PSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGIT G + W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW

A0A6J1CGC1 60S ribosomal protein L18a-like protein1.2e-7586.79Show/hide
Query:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYYPSA--PQPQPQPQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGW
        M+GDGKN+ V  DPQSQYHYGTFQGVANYYPSA  PQPQPQP S VGFPQPVAP  VSG HP YHGHLGYQAVPVQGYAIIEGRP+QE RLPCCGIGMGW
Subjt:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYYPSA--PQPQPQPQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA++AITFG+TKGA+SW
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW

A0A6J1EHH7 60S ribosomal protein L18a-like protein9.5e-7081.76Show/hide
Query:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYYPSAPQPQPQ--PQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGW
        M+GDGK++ VF DPQSQYHYGTFQGVANYY SAP+PQPQ  PQS VGFP  VAP      HPCYHGHL YQAVPVQGYAIIEGRPF E RLPCCGIGMGW
Subjt:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYYPSAPQPQPQ--PQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW
        FLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+ACAIASVLAV+AITFG++KG + W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW

A0A6J1KIR0 60S ribosomal protein L18a-like protein4.7e-6981.76Show/hide
Query:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYYPSAPQPQPQ--PQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGW
        M+ DGK++ VF DPQSQYHYGTFQGVANYY SAPQPQPQ  PQS VGFP  VAP      HPCYHGHL YQAVPVQGYAIIEGRPF E RLPCCGIGMGW
Subjt:  MTGDGKNNPVFRDPQSQYHYGTFQGVANYYPSAPQPQPQ--PQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW
        FLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+ACAIASVLAV+AITFG++KG + W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW

SwissProt top hitse value%identityAlignment
Q8L9S1 60S ribosomal protein L18a-like protein1.2e-3252.32Show/hide
Query:  QSQYHYGTFQGVANYYPSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYH--GHLG----YQAVP--VQGYAIIEGRPFQEPRLPCCGIGMGWFLFMIGFF
        Q QY+YGTFQGVAN+    P P P PQ    F QP  P     GH   +  GH G     Q  P  V  Y ++E RP  E  LPCCG+GMGWFLF++GF 
Subjt:  QSQYHYGTFQGVANYYPSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYH--GHLG----YQAVP--VQGYAIIEGRPFQEPRLPCCGIGMGWFLFMIGFF

Query:  LGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW
         GGIPWY+GAFIVL   VD+REK GYVAC+IASV+ +IA+  G+T   + W
Subjt:  LGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW

Arabidopsis top hitse value%identityAlignment
AT1G17080.1 Ribosomal protein L18ae family8.3e-4259.31Show/hide
Query:  SQYH-YGTFQGVANYYPSAPQPQPQPQSFV-GFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGWFLFMIGFFLGGIPWY
        +Q+H YGTFQGV+NY      P PQ  + V GFPQP AP  V      Y+ H GYQ VPV G  + EGRP ++ RLPCCGIG+GWFLF++GFFLG IPWY
Subjt:  SQYH-YGTFQGVANYYPSAPQPQPQPQSFV-GFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGWFLFMIGFFLGGIPWY

Query:  VGAFIVLF-VRVDYREKPGYVACAIASVLAVIAITFGITKGADSW
        VG FI++F  R+DYREKPGY+AC IA++LA IA+  G++KGAD W
Subjt:  VGAFIVLF-VRVDYREKPGYVACAIASVLAVIAITFGITKGADSW

AT1G29970.1 60S ribosomal protein L18A-18.3e-3452.32Show/hide
Query:  QSQYHYGTFQGVANYYPSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYH--GHLG----YQAVP--VQGYAIIEGRPFQEPRLPCCGIGMGWFLFMIGFF
        Q QY+YGTFQGVAN+    P P P PQ    F QP  P     GH   +  GH G     Q  P  V  Y ++E RP  E  LPCCG+GMGWFLF++GF 
Subjt:  QSQYHYGTFQGVANYYPSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYH--GHLG----YQAVP--VQGYAIIEGRPFQEPRLPCCGIGMGWFLFMIGFF

Query:  LGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW
         GGIPWY+GAFIVL   VD+REK GYVAC+IASV+ +IA+  G+T   + W
Subjt:  LGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW

AT1G29970.2 60S ribosomal protein L18A-19.5e-3054.55Show/hide
Query:  QSQYHYGTFQGVANYYPSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYH--GHLG----YQAVP--VQGYAIIEGRPFQEPRLPCCGIGMGWFLFMIGFF
        Q QY+YGTFQGVAN+    P P P PQ    F QP  P     GH   +  GH G     Q  P  V  Y ++E RP  E  LPCCG+GMGWFLF++GF 
Subjt:  QSQYHYGTFQGVANYYPSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYH--GHLG----YQAVP--VQGYAIIEGRPFQEPRLPCCGIGMGWFLFMIGFF

Query:  LGGIPWYVGAFIVLFVRVDYREKPGYVACAIA
         GGIPWY+GAFIVL   VD+REK GYVAC+IA
Subjt:  LGGIPWYVGAFIVLFVRVDYREKPGYVACAIA

AT1G29970.3 60S ribosomal protein L18A-11.2e-2740.93Show/hide
Query:  QSQYHYGTFQGVANYYPSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYH--GHLG----YQAVP--VQGYAIIEGRPFQEPRLPCCGIGMGWFL------
        Q QY+YGTFQGVAN+    P P P PQ    F QP  P     GH   +  GH G     Q  P  V  Y ++E RP  E  LPCCG+GMGWFL      
Subjt:  QSQYHYGTFQGVANYYPSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYH--GHLG----YQAVP--VQGYAIIEGRPFQEPRLPCCGIGMGWFL------

Query:  ------------------------------------FMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW
                                            F++GF  GGIPWY+GAFIVL   VD+REK GYVAC+IASV+ +IA+  G+T   + W
Subjt:  ------------------------------------FMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW

AT1G53560.1 Ribosomal protein L18ae family5.4e-3349.28Show/hide
Query:  YGTFQGVANYYPSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIV
        YGTFQGV  Y P +    P     +G PQP  P          H ++  +   V GY + +GRP ++ RLPCCG+G+GWFLF+IGF LG IPWYVG FI+
Subjt:  YGTFQGVANYYPSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIV

Query:  LFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW
        +  R+D REKPGYVAC IA+V+A I I FG+  G   W
Subjt:  LFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGGCGACGGGAAAAACAACCCGGTATTCCGCGATCCACAGAGTCAATACCATTACGGTACGTTTCAGGGCGTCGCAAACTATTATCCTTCTGCCCCACAG
CCGCAGCCGCAGCCCCAGTCTTTCGTCGGTTTCCCTCAGCCGGTTGCTCCATCAGAAGTTTCTGGTGGCCACCCATGTTACCATGGACATCTCGGTTATCAAGCC
GTTCCAGTTCAAGGTTATGCTATTATTGAGGGAAGACCTTTTCAAGAACCCCGTCTTCCTTGCTGTGGCATTGGCATGGGCTGGTTCTTGTTTATGATTGGTTTC
TTTCTTGGTGGCATTCCCTGGTATGTTGGAGCTTTTATTGTTCTCTTTGTACGGGTGGATTATCGAGAAAAGCCTGGATATGTTGCTTGTGCAATCGCTTCAGTT
CTTGCCGTCATTGCTATAACATTTGGCATCACCAAAGGAGCTGACTCCTGGTAA
mRNA sequenceShow/hide mRNA sequence
CCACTCTTGTTCCGCCATAGCTCCGTCGCTCCAAAATTTCCCGGCGAATCCGCAGAAGAAGAAGAGAAAAGCGACGACGGGACCCTCGCCGTCGCCTTGATATTC
AACACACCATATTTGATTCTGGTTTTCTTCTTCTTCTGCAAAGAATATGACTGGCGACGGGAAAAACAACCCGGTATTCCGCGATCCACAGAGTCAATACCATTA
CGGTACGTTTCAGGGCGTCGCAAACTATTATCCTTCTGCCCCACAGCCGCAGCCGCAGCCCCAGTCTTTCGTCGGTTTCCCTCAGCCGGTTGCTCCATCAGAAGT
TTCTGGTGGCCACCCATGTTACCATGGACATCTCGGTTATCAAGCCGTTCCAGTTCAAGGTTATGCTATTATTGAGGGAAGACCTTTTCAAGAACCCCGTCTTCC
TTGCTGTGGCATTGGCATGGGCTGGTTCTTGTTTATGATTGGTTTCTTTCTTGGTGGCATTCCCTGGTATGTTGGAGCTTTTATTGTTCTCTTTGTACGGGTGGA
TTATCGAGAAAAGCCTGGATATGTTGCTTGTGCAATCGCTTCAGTTCTTGCCGTCATTGCTATAACATTTGGCATCACCAAAGGAGCTGACTCCTGGTAAAGGAG
ACATCTGCAGCACGGTCTGGTCTAGCCATGTCGTCGCCTGCATCAACGAAAACAACTGGTGGGGATCCTGTAATTAGCCTTGAAATTTTATTCTTTCAATCTCTA
TCTAGCATTTATTGGTTTCCTTTACCATATACTGAAATTTTCCTGACTTGCCAAATGTGAAATGTTAATAGATTGAAGACGAAACTAATAGATTGATTGGAATGT
GTTGGATCAAATTGCACCCACCTTGACTATTTCTTACAACCGTCTCATCCTACTATATATAAATATTGTCGTTGAGTAAATTTGTCGGATGACCATTATGTCTTG
AACCTATTTTCTCCGGGTCCTTTTCTATCTTTA
Protein sequenceShow/hide protein sequence
MTGDGKNNPVFRDPQSQYHYGTFQGVANYYPSAPQPQPQPQSFVGFPQPVAPSEVSGGHPCYHGHLGYQAVPVQGYAIIEGRPFQEPRLPCCGIGMGWFLFMIGF
FLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGADSW