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Lcy06g009700 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g009700
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionF-box domain-containing protein
Genome locationChr06:10058756..10063695
RNA-Seq ExpressionLcy06g009700
SyntenyLcy06g009700
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
GO:0080048 - GDP-D-glucose phosphorylase activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2028691.1 hypothetical protein ES319_D05G113400v1 [Gossypium barbadense]2.4e-2167.03Show/hide
Query:  ARGRSRASEQGWRKEIELLLDFYRAGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG
        A+G        W  E  L      AGP  AGF    TALR+E C KIRRGKE MQAFPKFLIASPSFHGGRGALPSAGGHPADLT+LAGGG
Subjt:  ARGRSRASEQGWRKEIELLLDFYRAGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG

KAG7019470.1 hypothetical protein SDJN02_18431, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-2878.89Show/hide
Query:  GRSRASEQGWRKEIELLLDFYRAGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGGY
        GR R SEQ  RKE              AGFHCSITALRQESCVKIRR KEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGGY
Subjt:  GRSRASEQGWRKEIELLLDFYRAGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGGY

MBA0622908.1 hypothetical protein [Gossypium davidsonii]4.1e-2183.58Show/hide
Query:  AGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG
        AGP  AGF    TALR+E C KIRRGKE MQAFPKFLIASPSFHGGRGALPSAGGHPADLT+LAGGG
Subjt:  AGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG

OMO73789.1 hypothetical protein COLO4_26862 [Corchorus olitorius]1.3e-2287.88Show/hide
Query:  AGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGG
        AGPVRAGF  S TALR+E C KIRRGKE M AFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGG
Subjt:  AGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGG

OMP06232.1 hypothetical protein CCACVL1_01663 [Corchorus capsularis]4.8e-2287.69Show/hide
Query:  AGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAG
        AGPVRAGF  S TALR+E C KIRRGKE M AFPKFLIASPSFHGGRGALPSAGGHPADLTFLAG
Subjt:  AGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAG

TrEMBL top hitse value%identityAlignment
A0A1R3HTR3 F-box domain-containing protein6.1e-2387.88Show/hide
Query:  AGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGG
        AGPVRAGF  S TALR+E C KIRRGKE M AFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGG
Subjt:  AGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGG

A0A1R3KGL9 F-box domain-containing protein2.3e-2287.69Show/hide
Query:  AGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAG
        AGPVRAGF  S TALR+E C KIRRGKE M AFPKFLIASPSFHGGRGALPSAGGHPADLTFLAG
Subjt:  AGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAG

A0A5D2CIG7 Uncharacterized protein1.2e-2167.03Show/hide
Query:  ARGRSRASEQGWRKEIELLLDFYRAGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG
        A+G        W  E  L      AGP  AGF    TALR+E C KIRRGKE MQAFPKFLIASPSFHGGRGALPSAGGHPADLT+LAGGG
Subjt:  ARGRSRASEQGWRKEIELLLDFYRAGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG

A0A5D2KTI7 Uncharacterized protein2.0e-2183.58Show/hide
Query:  AGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG
        AGP  AGF    TALR+E C KIRRGKE MQAFPKFLIASPSFHGGRGALPSAGGHPADLT+LAGGG
Subjt:  AGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG

A0A5J5RJ23 Uncharacterized protein1.2e-2167.03Show/hide
Query:  ARGRSRASEQGWRKEIELLLDFYRAGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG
        A+G        W  E  L      AGP  AGF    TALR+E C KIRRGKE MQAFPKFLIASPSFHGGRGALPSAGGHPADLT+LAGGG
Subjt:  ARGRSRASEQGWRKEIELLLDFYRAGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCAGTTCGTATGGCGCGAGGCGATGTTTGGCGTTGGGGCTTTGGTTTTCGATTCTATTGGGCGTCCAATGGTTGTGATGCAAGGATTTCATTCCGCTTTC
TCCTCAGTCCTTAGTGTAGAGGCCCAAGCAATCTTAGAGGGAATTAGATTGGCGCAAAGAATGAGGCTTCGACAGATTAAAATCTACTTTGATTCCCTTTTCTTA
TGTTCAGATGCTAAAGGAGGATATTCCCACCAACACGCGTTGCTGCCCAATACGTCGAGCCAATTCAACCATTGCTCTGCCAGAGGGAGATCGAGAGCGAGTGAA
CAGGGATGGCGTAAGGAAATTGAGTTACTCCTAGACTTTTACAGGGCTGGTCCTGTGAGGGCTGGCTTCCATTGTTCAATCACGGCTTTAAGGCAAGAGTCTTGT
GTTAAAATTAGAAGGGGCAAAGAATACATGCAAGCTTTCCCTAAGTTCTTGATTGCATCCCCTTCATTTCACGGTGGGCGTGGGGCCCTGCCCTCAGCTGGTGGG
CACCCAGCAGATCTTACCTTCCTTGCTGGTGGTGGTTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCAGTTCGTATGGCGCGAGGCGATGTTTGGCGTTGGGGCTTTGGTTTTCGATTCTATTGGGCGTCCAATGGTTGTGATGCAAGGATTTCATTCCGCTTTC
TCCTCAGTCCTTAGTGTAGAGGCCCAAGCAATCTTAGAGGGAATTAGATTGGCGCAAAGAATGAGGCTTCGACAGATTAAAATCTACTTTGATTCCCTTTTCTTA
TGTTCAGATGCTAAAGGAGGATATTCCCACCAACACGCGTTGCTGCCCAATACGTCGAGCCAATTCAACCATTGCTCTGCCAGAGGGAGATCGAGAGCGAGTGAA
CAGGGATGGCGTAAGGAAATTGAGTTACTCCTAGACTTTTACAGGGCTGGTCCTGTGAGGGCTGGCTTCCATTGTTCAATCACGGCTTTAAGGCAAGAGTCTTGT
GTTAAAATTAGAAGGGGCAAAGAATACATGCAAGCTTTCCCTAAGTTCTTGATTGCATCCCCTTCATTTCACGGTGGGCGTGGGGCCCTGCCCTCAGCTGGTGGG
CACCCAGCAGATCTTACCTTCCTTGCTGGTGGTGGTTACTAA
Protein sequenceShow/hide protein sequence
MLQFVWREAMFGVGALVFDSIGRPMVVMQGFHSAFSSVLSVEAQAILEGIRLAQRMRLRQIKIYFDSLFLCSDAKGGYSHQHALLPNTSSQFNHCSARGRSRASE
QGWRKEIELLLDFYRAGPVRAGFHCSITALRQESCVKIRRGKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGGY