; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g010010 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g010010
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRetrotransposon protein, putative, unclassified
Genome locationChr06:10490248..10491978
RNA-Seq ExpressionLcy06g010010
SyntenyLcy06g010010
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABA91072.1 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]8.7e-4631.99Show/hide
Query:  GLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNSKTPILL
        GLGFR+   FNQA+LA+ +WR+++ P+SL AR  K  YF + S I+     N S TWR+I++G     KG  WR+GNG+ I + +DPW+ R++S+ P+ +
Subjt:  GLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNSKTPILL

Query:  DNSIKGSKVCSLIDDNSCWIEAKVRECFHPQDAKDILNTPLGPNARDEII-WSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTINIKKSGKSLWRLSTIP
          + +   V  LI  +  W  A++R CF   D + IL+  L P   ++ + W PDK G+FSV+S Y+L    A    +S+S  ++ +KS   +W+     
Subjt:  DNSIKGSKVCSLIDDNSCWIEAKVRECFHPQDAKDILNTPLGPNARDEII-WSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTINIKKSGKSLWRLSTIP

Query:  RAKNCVWKILNNIIPTRSNLLKKRL---------------DINYLSHCWK--------LNIDASWNDSEDRGGVGWTVRDSEGSPICAGTKVIKDKWSIK
        + K   WK+ +N + T  N  K++L                ++ L  C +        +  D S++    +GG+   +RD+ GS + A  K +    +  
Subjt:  RAKNCVWKILNNIIPTRSNLLKKRL---------------DINYLSHCWK--------LNIDASWNDSEDRGGVGWTVRDSEGSPICAGTKVIKDKWSIK

Query:  ILEAKAIWEALIRIASLPEKPPKIIVSSDCLELITLLNRGDEDLLEV
          E +A  E LI       +P  I++ +DC+ L+ LL  G+ DL EV
Subjt:  ILEAKAIWEALIRIASLPEKPPKIIVSSDCLELITLLNRGDEDLLEV

KAG7583573.1 hypothetical protein ISN44_As08g030850 [Arabidopsis suecica]9.9e-4231.57Show/hide
Query:  KEVEGLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNSKT
        K+  G+GFR++ HFN A+LAK SWR++++P  LL R  +  YF   S +EA +G  PS  WRSI+ G     +G RW +G+G  I+   DPWL+      
Subjt:  KEVEGLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNSKT

Query:  PILLDNSIKGSKVCSLIDDNS-CWIEAKVRECFHPQDAKDI--LNTPLGPNARDEIIWSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTINIKKSGKSLW
          L+ +S     V  L+  NS  W + K++E  HP D + I  + T L    +D   W   + G+++VKS YH +     E  ++ +    +    K +W
Subjt:  PILLDNSIKGSKVCSLIDDNS-CWIEAKVRECFHPQDAKDI--LNTPLGPNARDEIIWSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTINIKKSGKSLW

Query:  RLSTIPRAKNCVWKILNNIIPTRSNLLKKRL---------------DINYLSHC------WKL-----NIDASWNDSEDRGGVGWTVRDSEGSPICAGTK
         L+  P+ K+  W++L+N +P  SNL  +R+                I+ L HC      W+L     + DASW D   R G+GW + + +   I  G+ 
Subjt:  RLSTIPRAKNCVWKILNNIIPTRSNLLKKRL---------------DINYLSHC------WKL-----NIDASWNDSEDRGGVGWTVRDSEGSPICAGTK

Query:  VIKDKWSIKILEAKAIWEALIRIASLPEKPPKIIVSSDC------LELITLLNRGDEDLLEVQTFVDAILNMANTMGELSFEHCPREQNYIDHSIA
         I+   S    EA A+ EAL  +  L      +I   D       LE    L       LE+QT+VD I  +A T    SF+   R  N++  S+A
Subjt:  VIKDKWSIKILEAKAIWEALIRIASLPEKPPKIIVSSDC------LELITLLNRGDEDLLEVQTFVDAILNMANTMGELSFEHCPREQNYIDHSIA

XP_015388020.1 uncharacterized protein LOC107177951 [Citrus sinensis]9.0e-4331.52Show/hide
Query:  ESKEVEGLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNS
        ++K+   LGFR++  FNQA++AK SWRII+ P SLLAR  K  YF+   F+EA +G NPS  WRSI+WG+    KG RWR+ +G+ +++ +  WL R  +
Subjt:  ESKEVEGLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNS

Query:  KTPILLDNSIKGSKVCSLIDDNSCWIEAKVRECFHPQDAKDILNTPLGPN-ARDEIIWSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTINIKKSGKSLW
          PI   +    + V  LID++ CW +  +R+ FH +DA  IL  PL    + D+++W  DKKG +SVKS Y L +        S+S     K S  S+W
Subjt:  KTPILLDNSIKGSKVCSLIDDNSCWIEAKVRECFHPQDAKDILNTPLGPN-ARDEIIWSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTINIKKSGKSLW

Query:  RLS------------TIPRAKNCVWKILNNIIPTRSNLLKKRLDINYLSHC-----WKLNIDASWNDSEDRGGVGWTVRDSEGSPICAGTKVIKDKWSIK
         L             ++  A+  V       +P    +  + L      +C     +K+N+DA+      R G+G  +R+SEG  I A  K  K    + 
Subjt:  RLS------------TIPRAKNCVWKILNNIIPTRSNLLKKRLDINYLSHC-----WKLNIDASWNDSEDRGGVGWTVRDSEGSPICAGTKVIKDKWSIK

Query:  ILEAKAIWEALIRIASLPEKPPKIIVSSDCLELITLLNRGDEDLLEVQTFVDAILNMANTMGELSFEHCPREQNYIDHSIAHESVGF
          EA+A    L  +A +    P +IV +D  E+  L++       E+   V  +      +  +  +H PR  N   H++A  ++ +
Subjt:  ILEAKAIWEALIRIASLPEKPPKIIVSSDCLELITLLNRGDEDLLEVQTFVDAILNMANTMGELSFEHCPREQNYIDHSIAHESVGF

XP_030507775.1 uncharacterized protein LOC115722655 [Cannabis sativa]9.0e-4339.51Show/hide
Query:  ESKEVEGLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNS
        +SK + GLGFR+++HFNQAMLAK +W+I K P SLL R  K  YF + S +EA  G NPS  WRSI+WG++    G  W++G+G  I    D WL  NN 
Subjt:  ESKEVEGLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNS

Query:  KTPILLDNSIKGSKVCSLIDDNSCWIEAKVRECFHPQDAKDILNTPL-GPNARDEIIWSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTINIKKSGKSLW
              D++    K+   I D+ CW   K+R+ F   D +DILN P+ G + +DE+IWS    G F+VKS YHL ++   ++ +++SDT N +K    +W
Subjt:  KTPILLDNSIKGSKVCSLIDDNSCWIEAKVRECFHPQDAKDILNTPL-GPNARDEIIWSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTINIKKSGKSLW

Query:  RLSTIPRAKNCVWKILNNIIPTRSNLLKKRLDINYLSHCWKLN
             P+ K+ +W+++ + IP  S+L  + +  + LS   K N
Subjt:  RLSTIPRAKNCVWKILNNIIPTRSNLLKKRLDINYLSHCWKLN

XP_040987788.1 uncharacterized protein LOC121235507 [Juglans microcarpa x Juglans regia]9.6e-4530.75Show/hide
Query:  ESKEVEGLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNS
        + K   GLGFR +  FN AMLAK  WRI+KDPSSL+AR  K  YFKD S +EA +G  PS  WRS+        +G RWR+GNG  I I    WL +  +
Subjt:  ESKEVEGLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNS

Query:  ---KTPILLDNSIKG-SKVCSLIDDNSC-WIEAKVRECFHPQDAKDILNTPLGP-NARDEIIWSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTINIKKS
           +TP+   N I   ++V  LI++    W    V + F  ++A  IL+ P+ P  A D +IW   K GK++V+S YH+   +  +    TS+    +  
Subjt:  ---KTPILLDNSIKG-SKVCSLIDDNSC-WIEAKVRECFHPQDAKDILNTPLGP-NARDEIIWSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTINIKKS

Query:  GKSLWRLSTIPRAKNCVWKILNNIIPTRSNLLKKRLDINYLSHCW--------KLNIDASWNDSEDRGGVGWTVRDSEGSPICAGTKVIKDKWSIKILEA
         K +W+L      K+ +WK+ NNI+ T+ NL ++++  N +   W        K+N DA+  +S  + G+G  +RD  G    A     +  + I   E 
Subjt:  GKSLWRLSTIPRAKNCVWKILNNIIPTRSNLLKKRLDINYLSHCW--------KLNIDASWNDSEDRGGVGWTVRDSEGSPICAGTKVIKDKWSIKILEA

Query:  KAIWEALIRIASLPEKPPKIIVSSDCLELITLLNRGDEDLLEVQTFVDAILNMAN--TMGELSFEHCPREQNYIDHSIAHESVGFTRHGFLFVSSQRRPS
         A+WEA++    L     ++I   D   +I  ++ G++D       V+ +    N  +  E++F H  RE N + H +A                     
Subjt:  KAIWEALIRIASLPEKPPKIIVSSDCLELITLLNRGDEDLLEVQTFVDAILNMAN--TMGELSFEHCPREQNYIDHSIAHESVGFTRHGFLFVSSQRRPS

Query:  TLEGD-ELFWTSELPHFISSICNFER
         L GD +++W  E P  I+   + ++
Subjt:  TLEGD-ELFWTSELPHFISSICNFER

TrEMBL top hitse value%identityAlignment
A0A6J1DRA0 uncharacterized protein LOC1110224231.1e-4150Show/hide
Query:  KEVEGLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNSKT
        K++ G+GFR+I  FNQAMLAK SWRI++ P SLLA+T +G YFK  SF++A +G  PS  WRSI+WG++ F KGYRW++GNG  I +  DPWL R+ + +
Subjt:  KEVEGLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNSKT

Query:  PILLDNSIKGSKVCSLIDDNSCWIEAKVRECFHPQDAKDILNTPL-GPNARDEIIWSPDKKGKFSVKSTYHL
        P+     ++   V  L++    W E KVRE F   +A  IL TPL   +  DEIIW  DK G FSV+S YHL
Subjt:  PILLDNSIKGSKVCSLIDDNSCWIEAKVRECFHPQDAKDILNTPL-GPNARDEIIWSPDKKGKFSVKSTYHL

A0A803P4T9 Uncharacterized protein1.5e-4040.69Show/hide
Query:  ESKEVEGLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNS
        +SK   G+GFR+ +HFNQA+LAK +WRI   P SLL+R  K  YF + SF+EA +G +PSLTW+SI WGK   +KG R+++GNG +I+   DPW+   N 
Subjt:  ESKEVEGLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNS

Query:  KTPILLDNSIKGSKVCSLIDDNSCWIEAKVRECFHPQDAKDILNTPLGPNA-RDEIIWSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTINIKKSGKSLW
          P+    S     V S I ++  W    +   F P D+  IL+ PL   A RD +IW     G ++V+S +HL  +   ++ +STSD  +I    K  W
Subjt:  KTPILLDNSIKGSKVCSLIDDNSCWIEAKVRECFHPQDAKDILNTPLGPNA-RDEIIWSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTINIKKSGKSLW

Query:  RLSTIPRAKNCVWKILNNIIPTRSNLLKKRL
         L+  P+ +  VWK+L+NI+PT + L KK++
Subjt:  RLSTIPRAKNCVWKILNNIIPTRSNLLKKRL

A0A803QNQ9 Uncharacterized protein1.5e-4328.94Show/hide
Query:  SKEVEGLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNSK
        SK   GLGFRNI+H NQAMLAK +WRI+ +P SL+A+  K  YFK   F+ A  G  PS  WRSI+WG++   KG  W++G+G  +   +  WL  +   
Subjt:  SKEVEGLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNSK

Query:  TPILLDNSIKGSKVCSLIDDNSCWIEAKVRECFHPQDAKDILNTPLGPNARDEIIWSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTINIKKSGKSLWRL
         P     S+    V   I ++  W   K+R  F  +    IL  P+ P++ D +IW+    G F+V S YHL  + +       S+    K+   ++W  
Subjt:  TPILLDNSIKGSKVCSLIDDNSCWIEAKVRECFHPQDAKDILNTPLGPNARDEIIWSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTINIKKSGKSLWRL

Query:  STIPRAKNCVWKILNNIIPTRSNLLKKR---------LDINYLSH-----------CWKLNIDASWNDSEDRGGVGWTVRDSEGSPICAGTKVIKDKWSI
        +  P+ K+ VWK  ++I+P+  NL  ++            ++ SH            ++L++DA+ + S ++ G G  V DS+G+ I + T       + 
Subjt:  STIPRAKNCVWKILNNIIPTRSNLLKKR---------LDINYLSH-----------CWKLNIDASWNDSEDRGGVGWTVRDSEGSPICAGTKVIKDKWSI

Query:  KILEAKAIWEALIRIASLPEKPPKIIVSSDCLELITLLNRGDEDLLEVQTFVDAILNMANTMGELSFEHCPREQNYIDHSIAHESVG
           EA+A+  AL+   ++    P  +++SDC  L+  ++    D   +   +  I++  ++       + PR  N   H +A  ++G
Subjt:  KILEAKAIWEALIRIASLPEKPPKIIVSSDCLELITLLNRGDEDLLEVQTFVDAILNMANTMGELSFEHCPREQNYIDHSIAHESVG

C7J8D0 Os11g0106066 protein4.2e-4631.99Show/hide
Query:  GLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNSKTPILL
        GLGFR+   FNQA+LA+ +WR+++ P+SL AR  K  YF + S I+     N S TWR+I++G     KG  WR+GNG+ I + +DPW+ R++S+ P+ +
Subjt:  GLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNSKTPILL

Query:  DNSIKGSKVCSLIDDNSCWIEAKVRECFHPQDAKDILNTPLGPNARDEII-WSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTINIKKSGKSLWRLSTIP
          + +   V  LI  +  W  A++R CF   D + IL+  L P   ++ + W PDK G+FSV+S Y+L    A    +S+S  ++ +KS   +W+     
Subjt:  DNSIKGSKVCSLIDDNSCWIEAKVRECFHPQDAKDILNTPLGPNARDEII-WSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTINIKKSGKSLWRLSTIP

Query:  RAKNCVWKILNNIIPTRSNLLKKRL---------------DINYLSHCWK--------LNIDASWNDSEDRGGVGWTVRDSEGSPICAGTKVIKDKWSIK
        + K   WK+ +N + T  N  K++L                ++ L  C +        +  D S++    +GG+   +RD+ GS + A  K +    +  
Subjt:  RAKNCVWKILNNIIPTRSNLLKKRL---------------DINYLSHCWK--------LNIDASWNDSEDRGGVGWTVRDSEGSPICAGTKVIKDKWSIK

Query:  ILEAKAIWEALIRIASLPEKPPKIIVSSDCLELITLLNRGDEDLLEV
          E +A  E LI       +P  I++ +DC+ L+ LL  G+ DL EV
Subjt:  ILEAKAIWEALIRIASLPEKPPKIIVSSDCLELITLLNRGDEDLLEV

Q2RBM8 Retrotransposon protein, putative, unclassified4.2e-4631.99Show/hide
Query:  GLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNSKTPILL
        GLGFR+   FNQA+LA+ +WR+++ P+SL AR  K  YF + S I+     N S TWR+I++G     KG  WR+GNG+ I + +DPW+ R++S+ P+ +
Subjt:  GLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNSKTPILL

Query:  DNSIKGSKVCSLIDDNSCWIEAKVRECFHPQDAKDILNTPLGPNARDEII-WSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTINIKKSGKSLWRLSTIP
          + +   V  LI  +  W  A++R CF   D + IL+  L P   ++ + W PDK G+FSV+S Y+L    A    +S+S  ++ +KS   +W+     
Subjt:  DNSIKGSKVCSLIDDNSCWIEAKVRECFHPQDAKDILNTPLGPNARDEII-WSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTINIKKSGKSLWRLSTIP

Query:  RAKNCVWKILNNIIPTRSNLLKKRL---------------DINYLSHCWK--------LNIDASWNDSEDRGGVGWTVRDSEGSPICAGTKVIKDKWSIK
        + K   WK+ +N + T  N  K++L                ++ L  C +        +  D S++    +GG+   +RD+ GS + A  K +    +  
Subjt:  RAKNCVWKILNNIIPTRSNLLKKRL---------------DINYLSHCWK--------LNIDASWNDSEDRGGVGWTVRDSEGSPICAGTKVIKDKWSIK

Query:  ILEAKAIWEALIRIASLPEKPPKIIVSSDCLELITLLNRGDEDLLEV
          E +A  E LI       +P  I++ +DC+ L+ LL  G+ DL EV
Subjt:  ILEAKAIWEALIRIASLPEKPPKIIVSSDCLELITLLNRGDEDLLEV

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657505.0e-1223.76Show/hide
Query:  IFGGDLQKPKGKFIGKAGILSVESKEVEGLGFRNILHFNQAMLAKLSWRIIKDPSSLLA-----RTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWG-KNF
        ++G   +K K   +  + + S   K+  GLG R     N+A+++K+ WR++++ +SL       + H G     R  I      + S TWRSI  G ++ 
Subjt:  IFGGDLQKPKGKFIGKAGILSVESKEVEGLGFRNILHFNQAMLAKLSWRIIKDPSSLLA-----RTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWG-KNF

Query:  FLKGYRWRMGNGRYIEIDKDPWLNRNNSKTPILLDNSIKGSKVCSLIDDNSCWIEAKVRECFHPQDAKDILNT---------PLGPNARDEIIWSPDKKG
           G  W  G+G+ I    D W+   + K  + LDN  + +  C  +     WI  +  + F   D     NT          L   ARD + W   + G
Subjt:  FLKGYRWRMGNGRYIEIDKDPWLNRNNSKTPILLDNSIKGSKVCSLIDDNSCWIEAKVRECFHPQDAKDILNT---------PLGPNARDEIIWSPDKKG

Query:  KFSVKSTYHLVMAKAVEMEASTSDTINIKKSGKSLWRLSTIPRAKNCVWKILNNIIPTRSNLLKKRLDINYLSHCWKLNIDA
        +FSV+S Y ++    V          N+      LW++    R K  +W + N  + T     ++ L  + +    K  +++
Subjt:  KFSVKSTYHLVMAKAVEMEASTSDTINIKKSGKSLWRLSTIPRAKNCVWKILNNIIPTRSNLLKKRLDINYLSHCWKLNIDA

P93295 Uncharacterized mitochondrial protein AtMg003101.5e-1339.05Show/hide
Query:  ESKEVE-GLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNN
        +SKE + GLGFR++  FNQA+LAK S+RII  P +LL+R  +  YF   S +E  +G  PS  WRSI+ G+    +G    +G+G + ++  D W+    
Subjt:  ESKEVE-GLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNN

Query:  SKTPI
           P+
Subjt:  SKTPI

Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.4e-0928.57Show/hide
Query:  KLNIDASWNDSEDRGGVGWTVRDSEGSPICAGTKVIKDKWSIKILEAKAIWEALIRIASLPEKPPKIIVSSDCLELITLLNRGDEDLLEVQTFVDAILNM
        K N DA+W     R G+GW +R+  G  +  G + +    ++   E +A+  A++ ++    K  +II  SD   L+ LLN  D+    +Q  ++ I  +
Subjt:  KLNIDASWNDSEDRGGVGWTVRDSEGSPICAGTKVIKDKWSIKILEAKAIWEALIRIASLPEKPPKIIVSSDCLELITLLNRGDEDLLEVQTFVDAILNM

Query:  ANTMGELSFEHCPREQNYIDHSIAHESVGFTRH
         +   E+ FE  PR  N +   IA ES+ F+ +
Subjt:  ANTMGELSFEHCPREQNYIDHSIAHESVGFTRH

AT4G29090.1 Ribonuclease H-like superfamily protein1.2e-2120.47Show/hide
Query:  GLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNSKTPILL
        G+GF++I  FN A+L K  WR++  P SL+A+  K  YF     + A +G  PS  W+SI   +    +G R  +GNG  I I +  WL+   +   + +
Subjt:  GLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNNSKTPILL

Query:  DN-------SIKG-SKVCSLIDDNSCWIEAKVRECFHPQDAKDILN--TPLGPNARDEIIWSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTI--NIKKS
                 S+    KV  LID++       V E   P+  + ++    P G    D   W     G ++VKS Y  V+ + +   +S  +    ++   
Subjt:  DN-------SIKG-SKVCSLIDDNSCWIEAKVRECFHPQDAKDILN--TPLGPNARDEIIWSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTI--NIKKS

Query:  GKSLWRLSTIPRAKNCVWKILNNIIPTRSNLLKKRLD--------------INYL---------------------------------------------
         + +W+  T P+ ++ +WK L+N +P    L  + L               +N+L                                             
Subjt:  GKSLWRLSTIPRAKNCVWKILNNIIPTRSNLLKKRLD--------------INYL---------------------------------------------

Query:  ----------------------------------------------------------------------SHCW-KLNIDASWNDSEDRGGVGWTVRDSE
                                                                               H W K N DA+WN   +R G+GW +R+ +
Subjt:  ----------------------------------------------------------------------SHCW-KLNIDASWNDSEDRGGVGWTVRDSE

Query:  GSPICAGTKVIKDKWSIKILEAKAIWEALIRIASLPEKPPKIIVSSDCLELITLLNRGDEDLLEVQTFVDAILNMANTMGELSFEHCPREQNYIDHSIAH
        G     G + +    S+   E +A+  A++ ++        +I  SD   LI +LN  DE    ++  +  +  + +   E+ F   PRE N +   +A 
Subjt:  GSPICAGTKVIKDKWSIKILEAKAIWEALIRIASLPEKPPKIIVSSDCLELITLLNRGDEDLLEVQTFVDAILNMANTMGELSFEHCPREQNYIDHSIAH

Query:  ESVGFTRH
        ES+ F  +
Subjt:  ESVGFTRH

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.1e-1439.05Show/hide
Query:  ESKEVE-GLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNN
        +SKE + GLGFR++  FNQA+LAK S+RII  P +LL+R  +  YF   S +E  +G  PS  WRSI+ G+    +G    +G+G + ++  D W+    
Subjt:  ESKEVE-GLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGNGRYIEIDKDPWLNRNN

Query:  SKTPI
           P+
Subjt:  SKTPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTGTGCGCGAATTTTTGGTGGGGATCTTCAGAAACCAAAAGGAAAATTCATTGGAAAAGCTGGAATTCTCTCTGTAGAAAGTAAAGAGGTTGAAGGGCTAGGCTT
CAGAAACATTCTCCATTTTAATCAAGCCATGTTAGCTAAGTTGAGTTGGAGGATTATCAAAGATCCGTCGAGCCTTCTCGCTAGAACCCATAAAGGAATATATTTCAAGG
ATAGGTCGTTTATTGAAGCTTTTATGGGGGTTAATCCTTCTCTCACGTGGAGAAGCATTATGTGGGGCAAGAACTTTTTTCTTAAAGGCTACAGGTGGAGGATGGGAAAC
GGCAGGTACATAGAGATTGATAAGGATCCATGGCTTAACAGAAACAACTCCAAAACCCCTATTCTGCTGGATAATTCGATAAAGGGAAGTAAAGTGTGCAGCCTTATTGA
TGACAACAGCTGCTGGATTGAGGCCAAAGTGCGAGAATGCTTTCATCCTCAAGATGCCAAAGATATTCTTAACACCCCTTTAGGCCCGAACGCTAGAGACGAGATCATAT
GGAGCCCGGACAAAAAGGGAAAATTCTCGGTTAAGAGTACTTATCACCTTGTTATGGCTAAAGCAGTGGAGATGGAAGCCTCAACATCAGACACCATCAACATTAAGAAA
AGCGGGAAGAGTCTATGGAGACTATCAACCATTCCAAGGGCCAAGAACTGTGTTTGGAAAATTTTAAATAATATTATCCCTACCCGCTCAAATTTGTTAAAAAAAAGATT
AGATATTAATTATTTGTCGCATTGTTGGAAGCTCAACATCGATGCCTCTTGGAATGATTCGGAAGATAGAGGCGGAGTGGGTTGGACAGTTCGCGACTCCGAAGGCTCTC
CCATCTGTGCAGGAACGAAAGTGATCAAAGATAAATGGTCGATAAAGATTTTGGAAGCCAAAGCGATTTGGGAAGCCCTTATTAGAATTGCATCCTTACCAGAAAAGCCG
CCGAAGATTATAGTGAGCTCTGACTGCCTGGAGTTGATCACCCTTCTGAATCGCGGTGATGAAGACCTCTTAGAAGTTCAGACCTTCGTTGATGCCATCCTCAACATGGC
CAATACTATGGGGGAGCTTTCTTTTGAGCATTGCCCCAGAGAGCAAAACTACATTGATCATTCCATCGCGCACGAGAGTGTTGGTTTTACCCGCCATGGTTTTTTGTTCG
TTTCGAGCCAGAGGCGTCCTTCCACGCTAGAAGGTGATGAGTTGTTTTGGACCTCTGAGCTCCCTCATTTTATTTCGTCTATCTGTAATTTTGAACGATTTAGGCTTTTA
GGCCTTTCTCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTGTGCGCGAATTTTTGGTGGGGATCTTCAGAAACCAAAAGGAAAATTCATTGGAAAAGCTGGAATTCTCTCTGTAGAAAGTAAAGAGGTTGAAGGGCTAGGCTT
CAGAAACATTCTCCATTTTAATCAAGCCATGTTAGCTAAGTTGAGTTGGAGGATTATCAAAGATCCGTCGAGCCTTCTCGCTAGAACCCATAAAGGAATATATTTCAAGG
ATAGGTCGTTTATTGAAGCTTTTATGGGGGTTAATCCTTCTCTCACGTGGAGAAGCATTATGTGGGGCAAGAACTTTTTTCTTAAAGGCTACAGGTGGAGGATGGGAAAC
GGCAGGTACATAGAGATTGATAAGGATCCATGGCTTAACAGAAACAACTCCAAAACCCCTATTCTGCTGGATAATTCGATAAAGGGAAGTAAAGTGTGCAGCCTTATTGA
TGACAACAGCTGCTGGATTGAGGCCAAAGTGCGAGAATGCTTTCATCCTCAAGATGCCAAAGATATTCTTAACACCCCTTTAGGCCCGAACGCTAGAGACGAGATCATAT
GGAGCCCGGACAAAAAGGGAAAATTCTCGGTTAAGAGTACTTATCACCTTGTTATGGCTAAAGCAGTGGAGATGGAAGCCTCAACATCAGACACCATCAACATTAAGAAA
AGCGGGAAGAGTCTATGGAGACTATCAACCATTCCAAGGGCCAAGAACTGTGTTTGGAAAATTTTAAATAATATTATCCCTACCCGCTCAAATTTGTTAAAAAAAAGATT
AGATATTAATTATTTGTCGCATTGTTGGAAGCTCAACATCGATGCCTCTTGGAATGATTCGGAAGATAGAGGCGGAGTGGGTTGGACAGTTCGCGACTCCGAAGGCTCTC
CCATCTGTGCAGGAACGAAAGTGATCAAAGATAAATGGTCGATAAAGATTTTGGAAGCCAAAGCGATTTGGGAAGCCCTTATTAGAATTGCATCCTTACCAGAAAAGCCG
CCGAAGATTATAGTGAGCTCTGACTGCCTGGAGTTGATCACCCTTCTGAATCGCGGTGATGAAGACCTCTTAGAAGTTCAGACCTTCGTTGATGCCATCCTCAACATGGC
CAATACTATGGGGGAGCTTTCTTTTGAGCATTGCCCCAGAGAGCAAAACTACATTGATCATTCCATCGCGCACGAGAGTGTTGGTTTTACCCGCCATGGTTTTTTGTTCG
TTTCGAGCCAGAGGCGTCCTTCCACGCTAGAAGGTGATGAGTTGTTTTGGACCTCTGAGCTCCCTCATTTTATTTCGTCTATCTGTAATTTTGAACGATTTAGGCTTTTA
GGCCTTTCTCAGTAA
Protein sequenceShow/hide protein sequence
MACARIFGGDLQKPKGKFIGKAGILSVESKEVEGLGFRNILHFNQAMLAKLSWRIIKDPSSLLARTHKGIYFKDRSFIEAFMGVNPSLTWRSIMWGKNFFLKGYRWRMGN
GRYIEIDKDPWLNRNNSKTPILLDNSIKGSKVCSLIDDNSCWIEAKVRECFHPQDAKDILNTPLGPNARDEIIWSPDKKGKFSVKSTYHLVMAKAVEMEASTSDTINIKK
SGKSLWRLSTIPRAKNCVWKILNNIIPTRSNLLKKRLDINYLSHCWKLNIDASWNDSEDRGGVGWTVRDSEGSPICAGTKVIKDKWSIKILEAKAIWEALIRIASLPEKP
PKIIVSSDCLELITLLNRGDEDLLEVQTFVDAILNMANTMGELSFEHCPREQNYIDHSIAHESVGFTRHGFLFVSSQRRPSTLEGDELFWTSELPHFISSICNFERFRLL
GLSQ