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Lcy06g012030 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g012030
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr06:14879098..14879472
RNA-Seq ExpressionLcy06g012030
SyntenyLcy06g012030
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019151047.1 PREDICTED: uncharacterized protein LOC109147845 [Ipomoea nil]1.9e-3053.23Show/hide
Query:  MRRLGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAK
        M  LGF + WVDL+++CV++V++S  +NG +   ++PTRGLRQGD LS Y+F++CAEGLS +LQ A R+ LI   R+AR  P VSH FF DD+LLFF+AK
Subjt:  MRRLGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAK

Query:  ASEGTVIRELLLLYEKASGQTINY
          E   I+  L  YE  SGQ +NY
Subjt:  ASEGTVIRELLLLYEKASGQTINY

XP_019163454.1 PREDICTED: uncharacterized protein LOC109159798 [Ipomoea nil]9.9e-3256.2Show/hide
Query:  LGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAKASE
        LGF Q W++L++ CV++VT++  +NG+  G V+PTRG+RQGD LS Y+F+LCAEGLS LLQ AE +  I   R+AR  PSVSH FF DD+LLFFRA + E
Subjt:  LGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAKASE

Query:  GTVIRELLLLYEKASGQTINY
           I++ L +Y  ASGQ INY
Subjt:  GTVIRELLLLYEKASGQTINY

XP_019170153.1 PREDICTED: uncharacterized protein LOC109165716 [Ipomoea nil]1.9e-3055.65Show/hide
Query:  MRRLGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAK
        MR LGFA+ WV+LI+ CV++V+++  +NG   G VVPTRGLRQGD LS Y+F++CAEGLS +LQ A+    I   R+AR  P++SH FF DD+LLFF+  
Subjt:  MRRLGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAK

Query:  ASEGTVIRELLLLYEKASGQTINY
        A EG+ I+  L  YEK SGQ+INY
Subjt:  ASEGTVIRELLLLYEKASGQTINY

XP_019180182.1 PREDICTED: uncharacterized protein LOC109175373 [Ipomoea nil]1.4e-3055.65Show/hide
Query:  MRRLGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAK
        M  LGFA+ WV+LI+ CV+SV+++  +NG   G VVP+RGLRQGD LS Y+F++CAEGLS +LQ A+    I   R+AR  P++SH FF DD+LLFF+A 
Subjt:  MRRLGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAK

Query:  ASEGTVIRELLLLYEKASGQTINY
        A EG  +++ L LYEK SGQ+INY
Subjt:  ASEGTVIRELLLLYEKASGQTINY

XP_031091035.1 uncharacterized protein LOC115996030 [Ipomoea triloba]6.4e-3155.65Show/hide
Query:  MRRLGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAK
        +  LGFA+ W++LI+ CV++V++ F +NG   G VVPTRGLRQGD LS Y+F++CAEGLS LLQ A+    I   R+AR  PSVSH FF DD+LLFFR+ 
Subjt:  MRRLGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAK

Query:  ASEGTVIRELLLLYEKASGQTINY
        A E   I+  L LYE  SGQ +NY
Subjt:  ASEGTVIRELLLLYEKASGQTINY

TrEMBL top hitse value%identityAlignment
A0A2N9G3M1 Uncharacterized protein5.8e-3052.03Show/hide
Query:  MRRLGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAK
        M ++GF   WVDL++ C+S+V++S  LNG   GH++P+RGLRQGD LS Y+FL+CAEG +SL++ AE Q LI    ++R  P  SH FF DD+++F RAK
Subjt:  MRRLGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAK

Query:  ASEGTVIRELLLLYEKASGQTIN
          E   +RE+L LYE ASGQ +N
Subjt:  ASEGTVIRELLLLYEKASGQTIN

A0A2N9I509 Uncharacterized protein1.5e-3054.55Show/hide
Query:  RLGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAKAS
        +LGFA  WV L++ CV+S ++S  +NGE  G+V+P+RGLRQGD LS Y+FL+CAEGLS+L++ AER SLI    + R  P +SH FF DD+++F RA  S
Subjt:  RLGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAKAS

Query:  EGTVIRELLLLYEKASGQTIN
        +  VI+ +L LYEKASGQ +N
Subjt:  EGTVIRELLLLYEKASGQTIN

A0A2N9IKR1 Reverse transcriptase domain-containing protein5.8e-3052.03Show/hide
Query:  MRRLGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAK
        M ++GF   WVDL++ C+S+V++S  LNG   GH++P+RGLRQGD LS Y+FL+CAEG +SL++ AE Q LI    ++R  P  SH FF DD+++F RAK
Subjt:  MRRLGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAK

Query:  ASEGTVIRELLLLYEKASGQTIN
          E   +RE+L LYE ASGQ +N
Subjt:  ASEGTVIRELLLLYEKASGQTIN

A0A6P6U6V4 uncharacterized protein LOC1137081835.8e-3051.22Show/hide
Query:  MRRLGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAK
        M+R+GF   W+  I+ C++SV++S N+NGEK G + P RGLRQGD LS Y+FL+CAEG S+LL+ A RQ  +SR ++A   PS+SH FF DD+L+F +AK
Subjt:  MRRLGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAK

Query:  ASEGTVIRELLLLYEKASGQTIN
          E   + ++L  Y +ASGQ IN
Subjt:  ASEGTVIRELLLLYEKASGQTIN

A0A7N2L6Z9 Reverse transcriptase domain-containing protein9.0e-3153.66Show/hide
Query:  MRRLGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAK
        MR++GF + W+ LI+RC+SSV++S  +NGE  G++VPTRGLRQGD LS Y+FLLCAEGLS+LL  A R  L++   L R  P ++H FF DD+LLF +A 
Subjt:  MRRLGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAK

Query:  ASEGTVIRELLLLYEKASGQTIN
          E   ++E+L  YE ASGQ +N
Subjt:  ASEGTVIRELLLLYEKASGQTIN

SwissProt top hitse value%identityAlignment
P92555 Uncharacterized mitochondrial protein AtMg012501.0e-1045.59Show/hide
Query:  FNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDD
        F +NG   G V P+RGLRQGD LS Y+F+LC E LS L + A+ Q  +   R++   P ++H  F DD
Subjt:  FNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDD

Arabidopsis top hitse value%identityAlignment
ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)7.1e-1245.59Show/hide
Query:  FNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDD
        F +NG   G V P+RGLRQGD LS Y+F+LC E LS L + A+ Q  +   R++   P ++H  F DD
Subjt:  FNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCGATTGGGTTTTGCACAGGCATGGGTGGATCTCATTATTCGATGTGTTAGTTCAGTCACTTTCTCATTTAATCTGAATGGTGAGAAGCTTGGGCATGTGGTTCC
AACGAGAGGCCTTCGGCAGGGGGATCTCTTGTCGTCTTACATTTTCTTACTCTGTGCAGAAGGGCTTTCTAGTTTGCTGCAAGGTGCTGAACGACAGAGTCTTATATCGA
GATTTCGTTTAGCTCGTACATACCCGTCAGTGTCGCATTTCTTTTTTACTGATGACAACCTTTTGTTTTTTCGAGCGAAGGCATCTGAGGGCACGGTCATCCGAGAGTTG
TTGTTGCTTTATGAGAAAGCCTCTGGACAAACCATTAATTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGTCGATTGGGTTTTGCACAGGCATGGGTGGATCTCATTATTCGATGTGTTAGTTCAGTCACTTTCTCATTTAATCTGAATGGTGAGAAGCTTGGGCATGTGGTTCC
AACGAGAGGCCTTCGGCAGGGGGATCTCTTGTCGTCTTACATTTTCTTACTCTGTGCAGAAGGGCTTTCTAGTTTGCTGCAAGGTGCTGAACGACAGAGTCTTATATCGA
GATTTCGTTTAGCTCGTACATACCCGTCAGTGTCGCATTTCTTTTTTACTGATGACAACCTTTTGTTTTTTCGAGCGAAGGCATCTGAGGGCACGGTCATCCGAGAGTTG
TTGTTGCTTTATGAGAAAGCCTCTGGACAAACCATTAATTATTAG
Protein sequenceShow/hide protein sequence
MRRLGFAQAWVDLIIRCVSSVTFSFNLNGEKLGHVVPTRGLRQGDLLSSYIFLLCAEGLSSLLQGAERQSLISRFRLARTYPSVSHFFFTDDNLLFFRAKASEGTVIREL
LLLYEKASGQTINY