; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g012380 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g012380
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationChr06:15851711..15853292
RNA-Seq ExpressionLcy06g012380
SyntenyLcy06g012380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]5.2e-2542.14Show/hide
Query:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELL
        +LAKQ WR+L + NS+L ++L+GRYFK  +F+EA I  +PS  WRSI WGR+L  KG +WR+GN + + I  D W+  +   KI S+       RV  L+
Subjt:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELL

Query:  D-ENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMW
        D E   W+  V+  EF+P E   IL++P G    +D ++W
Subjt:  D-ENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMW

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]2.1e-2644.6Show/hide
Query:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELL
        MLAKQSWR+LR+ +S+L K LRG+YFK  +FL+A +G  PS  WRSI WGR+LF KG++W+VGN   I +  DPW+ R+GN         ++   V  L+
Subjt:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELL

Query:  DENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMW
        +    W E  + + F   E   IL  P  S+D  DEI+W
Subjt:  DENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMW

XP_024035599.1 uncharacterized protein LOC112096407 [Citrus clementina]6.4e-2340.29Show/hide
Query:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELL
        +LAKQ WRLL+N  S++ K+++ RY+K  +FL A +G+SPS  WRSI WGR +  KG +WR+GN   I I    WI R    K+    S   G +V EL+
Subjt:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELL

Query:  DENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMW
          N  W E +I Q F+  +   I ++       +DEI+W
Subjt:  DENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMW

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]4.9e-2337.41Show/hide
Query:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELL
        ++AKQ WR+++  +S++ ++L+ RYFK   F+ A +G+ PS  WRSI WGR +  KG +WR+GN   + +  + WI R    K  S  S      V EL+
Subjt:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELL

Query:  DENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMW
        DE   WRE +I Q F P++   I+ +P   R  +D+++W
Subjt:  DENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMW

XP_024041860.1 uncharacterized protein LOC112098995 [Citrus clementina]2.9e-2336.3Show/hide
Query:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELL
        ++AKQ WR+L+  NS++ +IL+ RYF+ + FL A +G+ PS  WRSI WGR +  +G +WRVGN   I + K  W+ R  + K  + L+      V EL+
Subjt:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELL

Query:  DENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMWLGSHVSQ
        D+ + W E++I+  F   +   I+ +P   R  +DE++W    + Q
Subjt:  DENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMWLGSHVSQ

TrEMBL top hitse value%identityAlignment
A0A6J1CUD6 uncharacterized protein LOC1110146636.9e-2346.21Show/hide
Query:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELL
        MLAKQSWR+LR+  S L K LRG+YF+  +FL+A +GNSPS  WRSI W R LF KG++WRVGN   I+I  D WI R+   +     SS+    V  L+
Subjt:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELL

Query:  DENNNWREKVIFQEFSPQEVLDILNMPTGSRD
         E   W E  I   F   E   IL +P    D
Subjt:  DENNNWREKVIFQEFSPQEVLDILNMPTGSRD

A0A6J1DAR4 uncharacterized protein LOC1110189542.5e-2542.14Show/hide
Query:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELL
        +LAKQ WR+L + NS+L ++L+GRYFK  +F+EA I  +PS  WRSI WGR+L  KG +WR+GN + + I  D W+  +   KI S+       RV  L+
Subjt:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELL

Query:  D-ENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMW
        D E   W+  V+  EF+P E   IL++P G    +D ++W
Subjt:  D-ENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMW

A0A6J1DRA0 uncharacterized protein LOC1110224231.0e-2644.6Show/hide
Query:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELL
        MLAKQSWR+LR+ +S+L K LRG+YFK  +FL+A +G  PS  WRSI WGR+LF KG++W+VGN   I +  DPW+ R+GN         ++   V  L+
Subjt:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELL

Query:  DENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMW
        +    W E  + + F   E   IL  P  S+D  DEI+W
Subjt:  DENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMW

A0A803P9P5 Uncharacterized protein1.1e-2341.84Show/hide
Query:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWIS--REGNPKIYSNLSSLKGKRVKE
        +LAKQSW +  N +S+L+KIL+ RYFK   FLEA IG+ PSL WRSI WG+ L  KG +W+VGN N I    DPW+       P I+ N S     +V E
Subjt:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWIS--REGNPKIYSNLSSLKGKRVKE

Query:  LLDENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMW
        L+     W   ++ Q F   +V  I ++P    D  D+++W
Subjt:  LLDENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMW

A0A803PM68 Uncharacterized protein2.1e-2439.57Show/hide
Query:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELL
        +LAKQ WR +R  NS+  K+L+  YF     LEA  GN  S  WRS+ WG+ +  KG++WR+GN N + + +DPW+ R    K+Y   S  +G  V +L+
Subjt:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELL

Query:  DENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMW
          N  W E+ I   F+P +   IL MPT   + +D+I+W
Subjt:  DENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMW

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003104.2e-0936.71Show/hide
Query:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISRE
        +LAKQS+R++   +++L ++LR RYF   + +E  +G  PS  WRSI  GR L  +G    +G+     +  D WI  E
Subjt:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISRE

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein9.9e-1430.67Show/hide
Query:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWIS----------REGNPKIYSNLSS
        +L KQ WR+L    S++ K+ + RYF   + L AP+G+ PS  W+SI   + +  +G +  VGN   I I +  W+           +   P+ Y+++SS
Subjt:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWIS----------REGNPKIYSNLSS

Query:  LKGKRVKELLDEN-NNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMW
        +   +V +L+DE+   WR+ VI   F   E   I  +  G R   D   W
Subjt:  LKGKRVKELLDEN-NNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMW

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.0e-1036.71Show/hide
Query:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISRE
        +LAKQS+R++   +++L ++LR RYF   + +E  +G  PS  WRSI  GR L  +G    +G+     +  D WI  E
Subjt:  MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGCCAAACAAAGTTGGAGGCTGCTAAGGAATACCAATAGTATCCTGTACAAGATCCTGAGAGGAAGATATTTCAAAGGAAGAAATTTTCTCGAAGCCCCT
ATAGGAAATTCGCCTTCCCTCCCGTGGAGAAGTATTTGTTGGGGTCGCAACCTCTTCCTTAAAGGCTTCAAGTGGAGGGTGGGGAATGAAAATCTTATAACTATT
GATAAGGACCCTTGGATCAGTAGAGAAGGCAACCCAAAAATTTACTCAAACCTTTCCTCTCTTAAAGGCAAAAGAGTCAAGGAGCTTCTTGATGAAAACAACAAT
TGGAGAGAGAAGGTGATCTTTCAAGAATTCTCCCCCCAAGAGGTTTTGGACATTCTGAACATGCCGACCGGAAGTAGGGACACAAAAGATGAAATAATGTGGTTG
GGGAGCCATGTGAGTCAGGTGCATCGGGAGAAGCCACCACCAAACATCTGGAGAATGAACTGCGATGCCACCTGGAACGAACAAGAAGGGCGAGGAGGATTAGGG
TGGGTCCTCAATGGCGAATCAGAAGACCTCTCCGATCTGAAAACTCTCACAGATGAAATCGCCTTTAGGGCCGACCGAGCTCATTCCACTTCTTTTCGTTACTGT
AATAGGCTTTTGAACACAGACGCGCACTGTGATGTGAAGAGAGCAGCTACTCTTCCCCTCTGGTCTTCTTCATCCCTCTCTTCTGGTTCTTCATTTTTTGTTCGG
ACAGAGGAGCCTCTCTCTCACGGGAAATGGAACAGGTCTTTTGGGCTCCCAATAACCCAAGTTGTTTTTTCCCTCTCTTTGAAGAGATTAGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGGCCAAACAAAGTTGGAGGCTGCTAAGGAATACCAATAGTATCCTGTACAAGATCCTGAGAGGAAGATATTTCAAAGGAAGAAATTTTCTCGAAGCCCCT
ATAGGAAATTCGCCTTCCCTCCCGTGGAGAAGTATTTGTTGGGGTCGCAACCTCTTCCTTAAAGGCTTCAAGTGGAGGGTGGGGAATGAAAATCTTATAACTATT
GATAAGGACCCTTGGATCAGTAGAGAAGGCAACCCAAAAATTTACTCAAACCTTTCCTCTCTTAAAGGCAAAAGAGTCAAGGAGCTTCTTGATGAAAACAACAAT
TGGAGAGAGAAGGTGATCTTTCAAGAATTCTCCCCCCAAGAGGTTTTGGACATTCTGAACATGCCGACCGGAAGTAGGGACACAAAAGATGAAATAATGTGGTTG
GGGAGCCATGTGAGTCAGGTGCATCGGGAGAAGCCACCACCAAACATCTGGAGAATGAACTGCGATGCCACCTGGAACGAACAAGAAGGGCGAGGAGGATTAGGG
TGGGTCCTCAATGGCGAATCAGAAGACCTCTCCGATCTGAAAACTCTCACAGATGAAATCGCCTTTAGGGCCGACCGAGCTCATTCCACTTCTTTTCGTTACTGT
AATAGGCTTTTGAACACAGACGCGCACTGTGATGTGAAGAGAGCAGCTACTCTTCCCCTCTGGTCTTCTTCATCCCTCTCTTCTGGTTCTTCATTTTTTGTTCGG
ACAGAGGAGCCTCTCTCTCACGGGAAATGGAACAGGTCTTTTGGGCTCCCAATAACCCAAGTTGTTTTTTCCCTCTCTTTGAAGAGATTAGTGTAA
Protein sequenceShow/hide protein sequence
MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELLDENNN
WREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMWLGSHVSQVHREKPPPNIWRMNCDATWNEQEGRGGLGWVLNGESEDLSDLKTLTDEIAFRADRAHSTSFRYC
NRLLNTDAHCDVKRAATLPLWSSSSLSSGSSFFVRTEEPLSHGKWNRSFGLPITQVVFSLSLKRLV