; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g012430 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g012430
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr06:16057205..16059124
RNA-Seq ExpressionLcy06g012430
SyntenyLcy06g012430
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4273082.1 unnamed protein product [Prunus armeniaca]1.3e-2526.67Show/hide
Query:  EASASDKSRSIPTWRKLWNSNVVPRVKACAWKIINHIIPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLW------LHYIPSLSNLFLLCR
        E+S  DK R I  W+ +W   V P+++   WK   +++  + N+  +GI++   C LCG++ E+  H+ ++C+  R LW      L     L   F++C 
Subjt:  EASASDKSRSIPTWRKLWNSNVVPRVKACAWKIINHIIPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLW------LHYIPSLSNLFLLCR

Query:  NSWEAIGYWNWMTENLSKEDLSKAIVIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKDNTYQSPQPASRSRSHPSHER------WKNPPTNIW
          WE +       E+ + + L      +W+IW  R+  V   F   +   H  V+  + ++          +P       P   +      W+ PP  + 
Subjt:  NSWEAIGYWNWMTENLSKEDLSKAIVIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKDNTYQSPQPASRSRSHPSHER------WKNPPTNIW

Query:  KMNTDTTWSDCSAQGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKEDRLPLEIESDALEIVNLLNDRADNFTELKNIVDAIRS
        K+N D  W   +  GGV WVVRDSDG +V  G +         A+EA AI E L + +   +     LE+ESD+L+++ ++    +    +  IV  I+ 
Subjt:  KMNTDTTWSDCSAQGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKEDRLPLEIESDALEIVNLLNDRADNFTELKNIVDAIRS

Query:  LCSEWGRVVIRHCPRSENFVAHNVARKVTK
        L  ++   V  + PR+ N  AH +A  V++
Subjt:  LCSEWGRVVIRHCPRSENFVAHNVARKVTK

CAB4303756.1 unnamed protein product [Prunus armeniaca]2.0e-2630.34Show/hide
Query:  EASASDKSRSIPTWRKLWNSNVVPRVKACAWKIINHIIPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAI
        EAS+S    S+  W+ +W+ +  P++KA  W+  ++I+  R N++++ +     C  CG ++ET  H+ +EC   R  W     S   L +      + I
Subjt:  EASASDKSRSIPTWRKLWNSNVVPRVKACAWKIINHIIPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAI

Query:  GYWNWMTENL-SKEDLSKAI----VIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKDNTYQSPQPASRSRSHPSHERWKNPPTNIWKMNTDTT
          W  M   L S E  ++AI      +W+IW AR+  V +    +       +   +S+        Q PQP  +  S P+   W  PP  + K+N D  
Subjt:  GYWNWMTENL-SKEDLSKAI----VIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKDNTYQSPQPASRSRSHPSHERWKNPPTNIWKMNTDTT

Query:  WSDCSAQGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKEDRLPLEIESDALEIVNLLNDRADNFTELKNIVDAIRSLCSEWGR
        WS     GGV WV+RDS G L+  G +          +E LAI   L    +F   D   + +ESD+ + + +LN RA   ++L+ IV  IR L +   R
Subjt:  WSDCSAQGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKEDRLPLEIESDALEIVNLLNDRADNFTELKNIVDAIRSLCSEWGR

Query:  VVIRHCPRSENFVAHNVARKVTK
        V     PRS N  AH+VA  V+K
Subjt:  VVIRHCPRSENFVAHNVARKVTK

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]1.9e-2931.19Show/hide
Query:  KKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAIGYWNWMTENLSKEDLSKAIVIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKD
        KKEETT H++WECK I+ +W++  P  +N F + R +W    YW W+ +   +E+  ++++I  +IW  R+     +    +    R ++ +I + I+  
Subjt:  KKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAIGYWNWMTENLSKEDLSKAIVIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKD

Query:  NTYQSPQPASRSRSHP-------SHERWKNPPTNIWKMNTDTTWSDCSAQGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKED
            +         HP       +  RWK P +N WK+NTD  W   +   G+ W++RD  G ++  G R I+ +  I  LE +AI EGL+++   R+E 
Subjt:  NTYQSPQPASRSRSHP-------SHERWKNPPTNIWKMNTDTTWSDCSAQGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKED

Query:  RLPLEIESDALEIVNLLN
          P+ +ESD+LE ++LL+
Subjt:  RLPLEIESDALEIVNLLN

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]2.9e-2527.8Show/hide
Query:  SASDKSRSIPTWRKLWNSNVVPRVKACAWKIINHIIPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAIGY
        S+S  SRS+  WRKLW+ N+ P+V+  AWK+  + +P   N+ +KG+N+  +C  CG + E+  H+  +C+  + +W  ++ + ++L  +   + + +  
Subjt:  SASDKSRSIPTWRKLWNSNVVPRVKACAWKIINHIIPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAIGY

Query:  WNWMTENLSKEDLSKAIVIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKDNTYQSPQPASRSRSHPSHERWKNPPTNIWKMNTDTTWSDCSAQ
           + +  +  DL    V+ W IW  R+  V  +     E I       I +      TY    P S         +W  PP  ++K+N D   S+    
Subjt:  WNWMTENLSKEDLSKAIVIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKDNTYQSPQPASRSRSHPSHERWKNPPTNIWKMNTDTTWSDCSAQ

Query:  GGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKEDRLP-LEIESDALEIVNLLNDRADNFTELKNIVDAIRSLCSEWGRVVIRHC
          V  ++RD+ G +       ++ ++ ++ +EALA+  GL       KE +LP + +ESDAL +V+ +N  A+    L +I   I SL S +G   I H 
Subjt:  GGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKEDRLP-LEIESDALEIVNLLNDRADNFTELKNIVDAIRSLCSEWGRVVIRHC

Query:  PRSENFVAHNVAR
         R  N  AH +A+
Subjt:  PRSENFVAHNVAR

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]5.6e-2929.71Show/hide
Query:  SASDKSRSIPTWRKLWNSNVVPRVKACAWKIINHIIPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAIGY
        S S    S   W  LW   +  ++K   W+  N+++P+  N+ K+ +   P C  C    ET +H + ECK  R +WL    S   L     NS +    
Subjt:  SASDKSRSIPTWRKLWNSNVVPRVKACAWKIINHIIPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAIGY

Query:  WNWMTENLSKEDLSKAIVIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKDNTYQSPQPASRSRS-HPSHERWKNPPTNIWKMNTDTTWSDCSA
           M + L K DL   + + W  W AR+ C+ +     L  I    KA    ++      + PQ +  S S     + W  PP N++K+N D  ++  + 
Subjt:  WNWMTENLSKEDLSKAIVIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKDNTYQSPQPASRSRS-HPSHERWKNPPTNIWKMNTDTTWSDCSA

Query:  QGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKEDRLPLEIESDALEIVNLLNDRADNFTELKNIVDAIRSLCSEWGRVVIRHC
          GV  V+RDS+G +V  G+ +  LK      EA A+  GL+     R  D   L IESD LE+V L+N+   + +E+   + AI++    + +VV+ H 
Subjt:  QGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKEDRLPLEIESDALEIVNLLNDRADNFTELKNIVDAIRSLCSEWGRVVIRHC

Query:  PRSENFVAHNVAR
        PR  N  AH +A+
Subjt:  PRSENFVAHNVAR

TrEMBL top hitse value%identityAlignment
A0A6J1DL64 uncharacterized protein LOC111022134 isoform X19.4e-3031.19Show/hide
Query:  KKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAIGYWNWMTENLSKEDLSKAIVIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKD
        KKEETT H++WECK I+ +W++  P  +N F + R +W    YW W+ +   +E+  ++++I  +IW  R+     +    +    R ++ +I + I+  
Subjt:  KKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAIGYWNWMTENLSKEDLSKAIVIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKD

Query:  NTYQSPQPASRSRSHP-------SHERWKNPPTNIWKMNTDTTWSDCSAQGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKED
            +         HP       +  RWK P +N WK+NTD  W   +   G+ W++RD  G ++  G R I+ +  I  LE +AI EGL+++   R+E 
Subjt:  NTYQSPQPASRSRSHP-------SHERWKNPPTNIWKMNTDTTWSDCSAQGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKED

Query:  RLPLEIESDALEIVNLLN
          P+ +ESD+LE ++LL+
Subjt:  RLPLEIESDALEIVNLLN

A0A6J5UE59 Reverse transcriptase domain-containing protein3.1e-2529.32Show/hide
Query:  EASASDKSRSIPTWRKLWNSNVVPRVKACAWKIINHIIPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAI
        EAS+S    S+  W+ +W+ +  P++KA  W   ++I+  R N+ ++ +     C  CG ++ET  H+ +EC   R  W     S   L +      + I
Subjt:  EASASDKSRSIPTWRKLWNSNVVPRVKACAWKIINHIIPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAI

Query:  GYWNWMTENL-SKEDLSKAI----VIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKDNTYQSPQPAS-RSRSHPSHERWKNPPTNIWKMNTDT
          W  M   L S E  ++AI      +W+IW AR+  V +    +   +   +   +S+     +  Q  QP   +  S P+   W  P   + K+N D 
Subjt:  GYWNWMTENL-SKEDLSKAI----VIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKDNTYQSPQPAS-RSRSHPSHERWKNPPTNIWKMNTDT

Query:  TWSDCSAQGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKEDRLPLEIESDALEIVNLLNDRADNFTELKNIVDAIRSLCSEWG
         WS     GGV WV+RDS G L+  G +          +E LAI   L    +F   D   + +ESD+ + + +LN RA   ++L+ IV  IR L +   
Subjt:  TWSDCSAQGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKEDRLPLEIESDALEIVNLLNDRADNFTELKNIVDAIRSLCSEWG

Query:  RVVIRHCPRSENFVAHNVARKVTK
        RV     PRS N  AH+VA   +K
Subjt:  RVVIRHCPRSENFVAHNVARKVTK

A0A6J5UF50 Uncharacterized protein3.1e-2529.32Show/hide
Query:  EASASDKSRSIPTWRKLWNSNVVPRVKACAWKIINHIIPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAI
        EAS+S    S+  W+ +W+ +  P++KA  W   ++I+  R N+ ++ +     C  CG ++ET  H+ +EC   R  W     S   L +      + I
Subjt:  EASASDKSRSIPTWRKLWNSNVVPRVKACAWKIINHIIPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAI

Query:  GYWNWMTENL-SKEDLSKAI----VIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKDNTYQSPQPAS-RSRSHPSHERWKNPPTNIWKMNTDT
          W  M   L S E  ++AI      +W+IW AR+  V +    +   +   +   +S+     +  Q  QP   +  S P+   W  P   + K+N D 
Subjt:  GYWNWMTENL-SKEDLSKAI----VIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKDNTYQSPQPAS-RSRSHPSHERWKNPPTNIWKMNTDT

Query:  TWSDCSAQGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKEDRLPLEIESDALEIVNLLNDRADNFTELKNIVDAIRSLCSEWG
         WS     GGV WV+RDS G L+  G +          +E LAI   L    +F   D   + +ESD+ + + +LN RA   ++L+ IV  IR L +   
Subjt:  TWSDCSAQGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKEDRLPLEIESDALEIVNLLNDRADNFTELKNIVDAIRSLCSEWG

Query:  RVVIRHCPRSENFVAHNVARKVTK
        RV     PRS N  AH+VA   +K
Subjt:  RVVIRHCPRSENFVAHNVARKVTK

A0A6J5WPU6 Reverse transcriptase domain-containing protein9.7e-2730.34Show/hide
Query:  EASASDKSRSIPTWRKLWNSNVVPRVKACAWKIINHIIPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAI
        EAS+S    S+  W+ +W+ +  P++KA  W+  ++I+  R N++++ +     C  CG ++ET  H+ +EC   R  W     S   L +      + I
Subjt:  EASASDKSRSIPTWRKLWNSNVVPRVKACAWKIINHIIPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAI

Query:  GYWNWMTENL-SKEDLSKAI----VIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKDNTYQSPQPASRSRSHPSHERWKNPPTNIWKMNTDTT
          W  M   L S E  ++AI      +W+IW AR+  V +    +       +   +S+        Q PQP  +  S P+   W  PP  + K+N D  
Subjt:  GYWNWMTENL-SKEDLSKAI----VIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKDNTYQSPQPASRSRSHPSHERWKNPPTNIWKMNTDTT

Query:  WSDCSAQGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKEDRLPLEIESDALEIVNLLNDRADNFTELKNIVDAIRSLCSEWGR
        WS     GGV WV+RDS G L+  G +          +E LAI   L    +F   D   + +ESD+ + + +LN RA   ++L+ IV  IR L +   R
Subjt:  WSDCSAQGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKEDRLPLEIESDALEIVNLLNDRADNFTELKNIVDAIRSLCSEWGR

Query:  VVIRHCPRSENFVAHNVARKVTK
        V     PRS N  AH+VA  V+K
Subjt:  VVIRHCPRSENFVAHNVARKVTK

A0A803PMU7 Uncharacterized protein1.4e-2525.48Show/hide
Query:  ASASDKSRSIPTWRKLWNSNVVPRVKACAWKIINHIIPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAIG
        A  S+KSR    W+ LW S++ P++K   W++ NH IP +  + K+G+ L   C LC  ++E   H +W C  ++ +W ++        ++  +  +A  
Subjt:  ASASDKSRSIPTWRKLWNSNVVPRVKACAWKIINHIIPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAIG

Query:  YWNWMTENLSKEDLSKAIVIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKDNTYQSPQPASRSRSHPSHERWKNPPTNIWKMNTDTTWSDCSA
           W+ ++L KE+  K + + W +W  R     NNF+   ++I   +  + +  +V  +  Q  Q    +  H  +  WK+PP N++ +NTD +     A
Subjt:  YWNWMTENLSKEDLSKAIVIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKDNTYQSPQPASRSRSHPSHERWKNPPTNIWKMNTDTTWSDCSA

Query:  QGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKEDRLPLEIESDALEIVNLLNDRADNFTELKNIVDAIRSLCSEWGRVVIRHC
          G+S V+RD +G+LV      +     +   EA+AI  G+K  + +  +     ++ SD+  I+  ++  A N TE    V  I  + +++  +     
Subjt:  QGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKEDRLPLEIESDALEIVNLLNDRADNFTELKNIVDAIRSLCSEWGRVVIRHC

Query:  PRSENFVAHNVARK
         R+   VA+++A++
Subjt:  PRSENFVAHNVARK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G33710.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.6e-0525.55Show/hide
Query:  IPTWRK-LWNSNVVPRVKACAWKIINHIIPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAIGYWNWMTEN
        + +W K +W     P+     W      +P ++ +   G+ L   C LC    E   HL   C+    LW H +     L       W  +  W      
Subjt:  IPTWRK-LWNSNVVPRVKACAWKIINHIIPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAIGYWNWMTEN

Query:  LSKEDLSKAIV--IMWKIWGARDFCVANNFIPNLELI
         S   L K IV  +++ IW  R     NNF+ N E I
Subjt:  LSKEDLSKAIV--IMWKIWGARDFCVANNFIPNLELI

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-1424.55Show/hide
Query:  CVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAIGYWN-WMTENLSKEDLSKAIV------IMWKIWGARDFCVANNFIPNLELIHRG
        CV C    ET  HL+++C   R +W     ++S +       W    Y N +   NL  E      +      ++W++W +R+           EL+ +G
Subjt:  CVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAIGYWN-WMTENLSKEDLSKAIV------IMWKIWGARDFCVANNFIPNLELIHRG

Query:  VKASISKII---VKD-NTYQSPQPASRSRSHPSHER-----WKNPPTNIWKMNTDTTWSDCSAQGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAI
         +    +++   ++D   + + +      S P  ER     WK PP    K NTD TW   + + G+ W++R+  G ++++G R +     +   E  A+
Subjt:  VKASISKII---VKD-NTYQSPQPASRSRSHPSHER-----WKNPPTNIWKMNTDTTWSDCSAQGGVSWVVRDSDGSLVYVGMRRIKLKWEIQALEALAI

Query:  WEGLKSLMHFRKEDRLPLEIESDALEIVNLLNDRADNFTELKNIVDAIRSLCSEWGRVVIRHCPRSENFVAHNVARK
           + ++  F  +    +  ESDA  +VNLLN   D +  L+  ++ I+ L   +  V     PR  N VA  +AR+
Subjt:  WEGLKSLMHFRKEDRLPLEIESDALEIVNLLNDRADNFTELKNIVDAIRSLCSEWGRVVIRHCPRSENFVAHNVARK

AT4G10613.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein6.1e-0525.23Show/hide
Query:  IPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAIGYWNWMTENLSKEDLSKAI--VIMWKIWGARDFCVAN
        +P R+ +   G+ ++P+C LC +  ET  HLI  C     +W + + +   L  +    WE++  W  ++   S   + K +    +  IW  R     N
Subjt:  IPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAIGYWNWMTENLSKEDLSKAI--VIMWKIWGARDFCVAN

Query:  NFIPNLE
        N + NL+
Subjt:  NFIPNLE

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.8e-0721.18Show/hide
Query:  IMWKIWGARDFCVANN----FIPNLELIHRGVKASISKIIVKDNTYQSPQPASRSRSHPS-HERWKNPPTNIWKMNTDTTWSDCSAQGGVSWVVRDSDGS
        +MW+IW + +  V N+    F   +E+     K  +      DNT  + Q      + PS + +W  P  +  K N D +  + +   G+ W++R+S G+
Subjt:  IMWKIWGARDFCVANN----FIPNLELIHRGVKASISKIIVKDNTYQSPQPASRSRSHPS-HERWKNPPTNIWKMNTDTTWSDCSAQGGVSWVVRDSDGS

Query:  LVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKEDRLPLEIESDALEIVNLLNDRADNFTELKNIVDAIRSLCSEWGRVVIRHCPRSENFVAHNVARK
        ++  GM + + +   +  E   +   +++   F  +  +    E D   I  ++N ++ N   L++ +D I+S    +  +      R +N  A  +A++
Subjt:  LVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKEDRLPLEIESDALEIVNLLNDRADNFTELKNIVDAIRSLCSEWGRVVIRHCPRSENFVAHNVARK

Query:  VTK
          K
Subjt:  VTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGCTTCAGCCTCTGATAAGTCCAGATCTATCCCTACATGGAGAAAACTATGGAACTCTAATGTCGTCCCGAGGGTAAAGGCCTGTGCCTGGAAAATC
ATCAACCACATAATACCCAATCGATCTAATATTAAGAAGAAAGGGATTAATCTAGCCCCTATCTGTGTCCTTTGTGGAAAGAAAGAAGAAACCACCACCCACCTA
ATCTGGGAGTGTAAGACCATTAGGGGGTTGTGGTTACATTACATCCCAAGCTTATCAAATTTGTTTCTGTTATGCAGGAATTCTTGGGAGGCTATCGGCTATTGG
AATTGGATGACGGAGAACTTGTCAAAGGAAGATTTGTCTAAAGCGATTGTCATCATGTGGAAGATCTGGGGAGCTAGAGATTTTTGTGTCGCAAACAACTTCATC
CCCAATTTAGAGCTTATTCACAGAGGGGTGAAGGCCAGCATTTCTAAGATAATAGTGAAGGACAATACTTACCAAAGTCCCCAGCCTGCTAGCCGATCTAGGAGC
CACCCGAGTCATGAAAGATGGAAGAACCCGCCGACCAACATCTGGAAGATGAATACAGACACAACCTGGTCAGACTGTTCAGCTCAAGGAGGAGTTTCGTGGGTA
GTTCGTGACTCCGATGGATCCCTGGTCTACGTAGGCATGAGGAGAATCAAGCTCAAATGGGAAATTCAAGCCCTCGAAGCTTTAGCTATTTGGGAGGGGCTCAAA
AGCTTAATGCATTTCAGAAAAGAGGATCGCTTACCTCTTGAAATCGAGTCGGACGCTCTTGAAATAGTGAATTTATTGAACGATCGTGCGGACAACTTCACTGAA
CTGAAGAACATTGTCGATGCAATCCGATCGCTGTGTTCAGAGTGGGGTAGAGTGGTTATCCGCCATTGCCCCAGGTCCGAGAATTTTGTCGCCCACAATGTCGCT
CGCAAGGTGACCAAGGCTCCGATGGTTCCACGCCAGGAGATCTCTCTCTCGGGAAGACGAGCGGTTTTTTTGGTCTGA
mRNA sequenceShow/hide mRNA sequence
CTTTCTTCTTCGTGTGAGTCTCTCTCTCTTCTTCTTACTTTTTTCTCTTCTCTTGCTTTCTTTTTCATCCATCTTCTTTCTCTGTTTCTTTTCTCTCCTTATTCC
CTCTTCTACTAGATTTCTCTCCGTCTACACCAAATATTTTTTTCGCTCATTCTTTTCTCTCTTTTCTTTTCCTTCCTCGTCAATCTCTGTTTCTCTCTTCGTCTT
TCATTTTTTCTCTTTTCTCGCCCCTTATTTTCTCCTCAAAATGTAAGATAGTGCCCATCTCTCCTTTCAGAATCACAAAACCGACAACATCGACCGACCGATCGA
GTATTTGGTCGGTCGGTTTTCATGAGCATTCCAAAACTATGAAGCACCGACTCCGACCGACCGACGAACAACCCTAACTTTAGGGGTAACTTCCTCAAAGCCCCC
ATAGGGAACAACCTGTCGTTAACCTGGAGAAGTATTTGTTGGGGGAGGGAGTTATTCGCTAAGGGCTATAGGTGGAAGGTCGAAAATGGAAGATACATTGAAATT
GATAAGGACCCGTGGATTAACAGGCAAGGTAGCCGCTCTCCCACCTCTACATCAGAGTTCCTGAAAGGGAGAAGTGTGAATGACATCATTGACGTCGACCACTCT
TGGCGAGAGGAGCTCATAAGGCAAAACTTTAATGTCTTAGATACAGAAGACATTCTCAGAATCCCTCTTGGCGACAAAAACGCTAAGGATGAGATTGTATGGAAC
CTTGACAAAAGAGGCATTTTTCTGTAAAAAGCACCTACCATCTCTGGTTGGGCATTTCCTCCATGGAAGAAGCTTCAGCCTCTGATAAGTCCAGATCTATCCCTA
CATGGAGAAAACTATGGAACTCTAATGTCGTCCCGAGGGTAAAGGCCTGTGCCTGGAAAATCATCAACCACATAATACCCAATCGATCTAATATTAAGAAGAAAG
GGATTAATCTAGCCCCTATCTGTGTCCTTTGTGGAAAGAAAGAAGAAACCACCACCCACCTAATCTGGGAGTGTAAGACCATTAGGGGGTTGTGGTTACATTACA
TCCCAAGCTTATCAAATTTGTTTCTGTTATGCAGGAATTCTTGGGAGGCTATCGGCTATTGGAATTGGATGACGGAGAACTTGTCAAAGGAAGATTTGTCTAAAG
CGATTGTCATCATGTGGAAGATCTGGGGAGCTAGAGATTTTTGTGTCGCAAACAACTTCATCCCCAATTTAGAGCTTATTCACAGAGGGGTGAAGGCCAGCATTT
CTAAGATAATAGTGAAGGACAATACTTACCAAAGTCCCCAGCCTGCTAGCCGATCTAGGAGCCACCCGAGTCATGAAAGATGGAAGAACCCGCCGACCAACATCT
GGAAGATGAATACAGACACAACCTGGTCAGACTGTTCAGCTCAAGGAGGAGTTTCGTGGGTAGTTCGTGACTCCGATGGATCCCTGGTCTACGTAGGCATGAGGA
GAATCAAGCTCAAATGGGAAATTCAAGCCCTCGAAGCTTTAGCTATTTGGGAGGGGCTCAAAAGCTTAATGCATTTCAGAAAAGAGGATCGCTTACCTCTTGAAA
TCGAGTCGGACGCTCTTGAAATAGTGAATTTATTGAACGATCGTGCGGACAACTTCACTGAACTGAAGAACATTGTCGATGCAATCCGATCGCTGTGTTCAGAGT
GGGGTAGAGTGGTTATCCGCCATTGCCCCAGGTCCGAGAATTTTGTCGCCCACAATGTCGCTCGCAAGGTGACCAAGGCTCCGATGGTTCCACGCCAGGAGATCT
CTCTCTCGGGAAGACGAGCGGTTTTTTTGGTCTGATCATTTTCCTAGTTGGTTTTGTTCCCTCCTTTATAAGGGTAGTTGTATCTCTTCTTTTTAATTAATGAAG
TTTCCGTTTCAAAAAAGAAAAAGAAAAAGA
Protein sequenceShow/hide protein sequence
MEEASASDKSRSIPTWRKLWNSNVVPRVKACAWKIINHIIPNRSNIKKKGINLAPICVLCGKKEETTTHLIWECKTIRGLWLHYIPSLSNLFLLCRNSWEAIGYW
NWMTENLSKEDLSKAIVIMWKIWGARDFCVANNFIPNLELIHRGVKASISKIIVKDNTYQSPQPASRSRSHPSHERWKNPPTNIWKMNTDTTWSDCSAQGGVSWV
VRDSDGSLVYVGMRRIKLKWEIQALEALAIWEGLKSLMHFRKEDRLPLEIESDALEIVNLLNDRADNFTELKNIVDAIRSLCSEWGRVVIRHCPRSENFVAHNVA
RKVTKAPMVPRQEISLSGRRAVFLV